Factsheet for Bra034383.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY30514	Canola	plastid	99.49	99.49
Bra000498.1-P	Field mustard	mitochondrion	89.23	97.57
Bra011985.1-P	Field mustard	plastid	97.27	97.27
AT2G28000.1	Thale cress	plastid	92.99	92.83
KRH25068	Soybean	nucleus	87.18	87.33
Solyc11g069790.1.1	Tomato	plastid	85.13	84.69
VIT_06s0061g00270.t01	Wine grape	plastid	84.27	84.13
PGSC0003DMT400002933	Potato	cytosol, extracellular, plastid	83.93	83.5
Os03t0859600-01	Rice	plastid	44.27	83.01
GSMUA_Achr11P...	Banana	plastid	82.56	82.42
Os12t0277500-01	Rice	plastid	81.2	82.18
GSMUA_AchrUn_...	Banana	plastid	81.03	82.15
EES19317	Sorghum	plastid	80.51	81.63
Zm00001d000399_P001	Maize	plastid	81.03	81.16
TraesCS2D01G049500.1	Wheat	golgi, plastid	79.66	80.62
TraesCSU01G009200.1	Wheat	mitochondrion, plastid	79.66	80.62
EER90466	Sorghum	plastid	79.83	80.52
KRH30612	Soybean	endoplasmic reticulum	81.03	79.93
TraesCS4A01G315500.2	Wheat	plastid	79.32	79.18
Zm00001d034919_P001	Maize	plastid	78.97	79.11
TraesCS5D01G550700.1	Wheat	plastid	79.49	79.08
HORVU5Hr1G125130.1	Barley	plastid	79.32	79.05
TraesCS5B01G563900.2	Wheat	plastid	79.32	78.91
Solyc06g075010.2.1	Tomato	plastid	78.8	78.27
PGSC0003DMT400031301	Potato	plastid	78.63	78.1
HORVU2Hr1G109400.1	Barley	cytosol	12.14	77.17
HORVU2Hr1G011340.1	Barley	cytosol	21.71	76.97
HORVU2Hr1G007840.7	Barley	mitochondrion, plastid	79.83	74.84
Os03t0859700-00	Rice	extracellular, plastid	22.22	70.27
Zm00001d051252_P001	Maize	cytosol	22.91	65.37
Bra023694.1-P	Field mustard	plastid	58.97	59.69
Bra028922.1-P	Field mustard	plastid	50.09	49.58
Bra001507.1-P	Field mustard	plastid	48.21	47.8
Bra011919.1-P	Field mustard	plastid	48.72	46.88
Bra001934.1-P	Field mustard	mitochondrion	41.88	42.46
Bra012462.1-P	Field mustard	plastid	43.76	42.17
Bra030858.1-P	Field mustard	cytosol	48.72	41.36
Bra005514.1-P	Field mustard	mitochondrion	38.46	40.25
Bra001524.1-P	Field mustard	mitochondrion	39.32	40.21
Bra022931.1-P	Field mustard	mitochondrion	37.27	39.14
Bra027431.1-P	Field mustard	cytosol	30.94	34.87
Bra021836.1-P	Field mustard	cytosol	25.81	33.78

Protein Annotations

MapMan:1.1.8.1.6.2.1	Gene3D:1.10.560.10	MapMan:1.2.1.2.1.1	MapMan:19.1.7.1	Gene3D:3.30.260.10	Gene3D:3.50.7.10
EnsemblPlantsGene:Bra034383	EnsemblPlants:Bra034383.1	EnsemblPlants:Bra034383.1-P	InterPro:Chaperonin_Cpn60_CS	InterPro:Chaprnin_Cpn60	ncoils:Coil
InterPro:Cpn60/TCP-1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987
GO:GO:0042026	InterPro:GROEL-like_equatorial_sf	InterPro:GroEL-like_apical_dom_sf	InterPro:IPR027409	InterPro:IPR027410	InterPro:IPR027413
UniProt:M4EZZ0	HAMAP:MF_00600	PFAM:PF00118	PRINTS:PR00298	ScanProsite:PS00296	PANTHER:PTHR11353
PANTHER:PTHR11353:SF175	SUPFAM:SSF48592	SUPFAM:SSF52029	SUPFAM:SSF54849	InterPro:TCP-1-like_intermed_sf	TIGRFAMs:TIGR02348
UniParc:UPI0002543C52	SEG:seg	:	:	:	:

Description

AT2G28000 (E=2e-273) CPN60A, CH-CPN60A, SLP | CPN60A (CHAPERONIN-60ALPHA); ATP binding / protein binding

Coordinates

chrA04:+:12257056..12259443

Molecular Weight (calculated)

61808.4 Da

IEP (calculated)

4.831

GRAVY (calculated)

0.003

Length

585 amino acids

Sequence
(BLAST)

001: MASANALSSA SVLCSSRQRK LSGGTQQKGE RVSYKKANRR FSVRANVKEI SFDQSSRAAL QAGIDKLADA VGLTLGPRGR NVVLDEFGSP KVVNDGVTIA
101: RAIELPDAME NAGAALIREV ASKTNDSAGD GTTTASVLAR EIIKHGLLSV TSGANPVSLK RGIDKTVQAL IEELEKRARP VKGGSDIKAV ATISAGNDEL
201: VGTMIADAID KVGPDGVLSI ESSSSFETTV EVEEGMEIDR GYISPQFVTN PEKLLVEFEN ARVLITDQKI TAIKDIIPIL EKTTQLRAPL LIIAEDVTGE
301: ALATLVVNKL RGVLNVVAVK APGFGERRKA MLQDIAILTG AEYQALDMGL LVENTTIEQL GIARKVTISK DSTTLIADAA SKDELQARIS QLKKELSETD
401: SVYDSEKLAE RIAKLSGGVA VIKVGAATET ELEDRKLRIE DAKNATFAAI EEGIVPGGGA TLVHLSTVIP AIKEKLEDAD ERLGADIVQK ALVAPAALIA
501: QNAGIEGEVV VEKIMFSEWE IGYNAMTDTY ENLLEAGVID PAKVTRCALQ NAASVAGMVL TTQAIVVDKP KPKAPAAAAP QGLMV

Best Arabidopsis Sequence Match ( AT2G28000.1 )
(BLAST)

001: MASANALSSA SVLCSSRQSK LGGGNQQQGQ RVSYNKRTIR RFSVRANVKE IAFDQHSRAA LQAGIDKLAD CVGLTLGPRG RNVVLDEFGS PKVVNDGVTI
101: ARAIELPNAM ENAGAALIRE VASKTNDSAG DGTTTASILA REIIKHGLLS VTSGANPVSL KRGIDKTVQG LIEELQKKAR PVKGRDDIRA VASISAGNDD
201: LIGSMIADAI DKVGPDGVLS IESSSSFETT VEVEEGMEID RGYISPQFVT NPEKLLAEFE NARVLITDQK ITAIKDIIPI LEKTTQLRAP LLIIAEDVTG
301: EALATLVVNK LRGVLNVVAV KAPGFGERRK AMLQDIAILT GAEYLAMDMS LLVENATIDQ LGIARKVTIS KDSTTLIADA ASKDELQARI AQLKKELFET
401: DSVYDSEKLA ERIAKLSGGV AVIKVGAATE TELEDRKLRI EDAKNATFAA IEEGIVPGGG AALVHLSTVI PAIKETFEDA DERLGADIVQ KALLSPAALI
501: AQNAGVEGEV VVEKIMFSDW ENGYNAMTDT YENLFEAGVI DPAKVTRCAL QNAASVAGMV LTTQAIVVDK PKPKAPAAAA PEGLMV

Arabidopsis Description

CPN60A1SLP [Source:UniProtKB/TrEMBL;Acc:A0A178VZW6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.