Factsheet for Bra027431.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY43988	Canola	cytosol	97.88	98.83
Zm00001d016540_P001	Maize	cytosol	13.1	65.38
Zm00001d053279_P001	Maize	mitochondrion	17.15	56.69
TraesCS6B01G012000.1	Wheat	cytosol	44.7	56.45
Zm00001d046709_P001	Maize	mitochondrion	16.57	54.78
Bra001507.1-P	Field mustard	plastid	61.08	53.73
AT3G13470.1	Thale cress	plastid	60.69	52.85
HORVU7Hr1G006490.2	Barley	cytosol	55.49	51.99
Solyc01g028810.2.1	Tomato	plastid	59.15	51.25
KRH43861	Soybean	plastid	58.38	51.18
EER89076	Sorghum	plastid	57.03	51.12
PGSC0003DMT400061700	Potato	extracellular	58.96	51.09
Bra011919.1-P	Field mustard	plastid	59.73	50.99
Zm00001d035937_P001	Maize	plastid	56.84	50.95
KRH13605	Soybean	nucleus	58.0	50.93
Zm00001d037526_P001	Maize	plastid	17.34	50.85
Bra028922.1-P	Field mustard	plastid	57.03	50.08
VIT_06s0004g00240.t01	Wine grape	plastid	58.57	50.0
Zm00001d045544_P002	Maize	plastid	57.23	49.5
HORVU4Hr1G076680.1	Barley	cytosol	18.69	48.99
TraesCS6B01G011800.1	Wheat	plastid	55.88	48.9
GSMUA_Achr3P27620_001	Banana	plastid	57.61	48.86
HORVU5Hr1G074160.1	Barley	cytosol	18.3	48.72
GSMUA_Achr9P23240_001	Banana	plastid	57.42	48.69
TraesCS6A01G006400.1	Wheat	golgi	56.07	48.66
TraesCS6D01G009100.1	Wheat	golgi	56.07	48.66
Os02t0102900-01	Rice	plastid	55.88	48.49
Os06t0114000-02	Rice	plastid	56.07	48.42
TraesCS6B01G012100.3	Wheat	plastid	55.88	48.33
TraesCS4A01G452700.2	Wheat	plastid	53.95	47.95
KXG29249	Sorghum	plastid	55.3	47.52
HORVU2Hr1G107410.2	Barley	cytosol	18.3	47.5
TraesCS7A01G036200.2	Wheat	golgi	56.07	46.94
Zm00001d054089_P002	Maize	plastid	55.11	46.35
TraesCS7D01G032800.1	Wheat	cytosol	56.07	46.26
TraesCS6B01G039300.2	Wheat	plastid	52.22	45.32
TraesCS6A01G028100.1	Wheat	plastid	52.02	45.15
TraesCS6D01G031400.1	Wheat	plastid	51.83	44.98
Bra030858.1-P	Field mustard	cytosol	59.34	44.7
HORVU6Hr1G005220.3	Barley	plastid	51.25	44.48
GSMUA_Achr11P...	Banana	plastid	57.23	42.67
HORVU6Hr1G000180.2	Barley	plastid	52.41	41.78
HORVU4Hr1G066820.2	Barley	cytosol	18.11	40.0
Bra012462.1-P	Field mustard	plastid	44.32	37.89
Bra000498.1-P	Field mustard	mitochondrion	34.49	33.46
Bra034383.1-P	Field mustard	plastid	34.87	30.94
Bra011985.1-P	Field mustard	plastid	34.68	30.77
Bra023694.1-P	Field mustard	plastid	33.72	30.28
Bra001524.1-P	Field mustard	mitochondrion	30.44	27.62
Bra001934.1-P	Field mustard	mitochondrion	30.25	27.21
Bra005514.1-P	Field mustard	mitochondrion	28.32	26.3
Bra022931.1-P	Field mustard	mitochondrion	27.94	26.03
Bra021836.1-P	Field mustard	cytosol	18.5	21.48
Os02t0103100-01	Rice	plasma membrane, vacuole	0.19	0.68

Protein Annotations

Gene3D:1.10.560.10	Gene3D:3.30.260.10	Gene3D:3.50.7.10	MapMan:35.1	EnsemblPlantsGene:Bra027431	EnsemblPlants:Bra027431.1
EnsemblPlants:Bra027431.1-P	ncoils:Coil	InterPro:Cpn60/TCP-1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	InterPro:GROEL-like_equatorial_sf	InterPro:GroEL-like_apical_dom_sf	InterPro:IPR027409	InterPro:IPR027410	InterPro:IPR027413
UniProt:M4EF69	PFAM:PF00118	PANTHER:PTHR11353	PANTHER:PTHR11353:SF164	SUPFAM:SSF48592	SUPFAM:SSF52029
InterPro:TCP-1-like_intermed_sf	UniParc:UPI000254807B	:	:	:	:

Description

AT3G13470 (E=8e-117) | chaperonin, putative

Coordinates

chrA05:-:20886810..20889452

Molecular Weight (calculated)

56202.6 Da

IEP (calculated)

4.577

GRAVY (calculated)

-0.308

Length

519 amino acids

Sequence
(BLAST)

001: MDAFERKYRS HGVNVTSEED YFEEPVENIG AKLARQAAAK TSDLAGHGVV LAQGFIDECV KVVADGVNPV LVSKGIDKTE KVLVYELDLM SKGRNAGNDP
101: EAGSMIAEAK RRVAKNDVLV IDEGKSAENN VYADYGNGCE YYMVNTERLL GEYHNCEVQV QDSEVADVSN PEAVRMIAEA KSKVGKNGVV VIDEGKSAEN
201: KVYAVEGIQF DNGNDSEYFI TDYERMCVEY DNCKAIFYFC AQLLLVDHKI TNERELVEFM ENVTRGGDPI IIIAEDIEKE PLDTLVVRKS RGKWNVASVK
301: APGSGELKSQ YLDDIAIITG ATVIREEDGL TLDKAGKEVL GNAYKVVITK EMTTIVGDGT THEAVSKRVA EIKSLIEQAE RGSEKETLNE RLAKLSGGVA
401: VIQVGGQTET ERIEKKLSFE EALNGTKGSV VGGGCTLLGL AAKVDAIKDT LENEEEKVGA DIVKKGLSNA GEGGSVVSEK VLRGSLEHAA SAAKKFLMSG
501: IKEPEAGNPM NNISGWLLR

Best Arabidopsis Sequence Match ( AT1G55490.1 )
(BLAST)

001: MASTFTATSS IGSMVAPNGH KSDKKLISKL SSSSFGRRQS VCPRPRRSSS AIVCAAKELH FNKDGTTIRR LQAGVNKLAD LVGVTLGPKG RNVVLESKYG
101: SPRIVNDGVT VAREVELEDP VENIGAKLVR QAAAKTNDLA GDGTTTSVVL AQGFIAEGVK VVAAGANPVL ITRGIEKTAK ALVTELKKMS KEVEDSELAD
201: VAAVSAGNND EIGNMIAEAM SKVGRKGVVT LEEGKSAENN LYVVEGMQFD RGYISPYFVT DSEKMSVEFD NCKLLLVDKK ITNARDLVGV LEDAIRGGYP
301: ILIIAEDIEQ EALATLVVNK LRGTLKIAAL RAPGFGERKS QYLDDIAILT GATVIREEVG LSLDKAGKEV LGNASKVVLT KETSTIVGDG STQDAVKKRV
401: TQIKNLIEQA EQDYEKEKLN ERIAKLSGGV AVIQVGAQTE TELKEKKLRV EDALNATKAA VEEGIVVGGG CTLLRLASKV DAIKATLDND EEKVGADIVK
501: RALSYPLKLI AKNAGVNGSV VSEKVLSNDN VKFGYNAATG KYEDLMAAGI IDPTKVVRCC LEHAASVAKT FLMSDCVVVE IKEPEPVPVG NPMDNSGYGY

Arabidopsis Description

CPN60B1LEN1 [Source:UniProtKB/TrEMBL;Acc:A0A178W724]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.