Factsheet for HORVU2Hr1G107410.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G076680.1	Barley	cytosol	95.0	95.96
HORVU5Hr1G074160.1	Barley	cytosol	88.5	90.77
HORVU4Hr1G066820.2	Barley	cytosol	77.0	65.53
CDY32775	Canola	cytosol	27.0	63.53
HORVU2Hr1G109400.1	Barley	cytosol	20.5	44.57
CDY10302	Canola	extracellular	14.0	43.08
CDX72433	Canola	endoplasmic reticulum	51.5	32.59
TraesCS6D01G009100.1	Wheat	golgi	95.0	31.77
Os02t0102900-01	Rice	plastid	90.5	30.27
KXG29249	Sorghum	plastid	90.5	29.97
HORVU7Hr1G006490.2	Barley	cytosol	82.5	29.78
Zm00001d054089_P002	Maize	plastid	88.5	28.69
CDX75715	Canola	cytosol	80.0	28.42
Bra001507.1-P	Field mustard	plastid	83.0	28.14
KRH43861	Soybean	plastid	83.0	28.04
AT5G56500.2	Thale cress	plastid	83.5	27.97
GSMUA_Achr3P27620_001	Banana	plastid	85.5	27.94
CDX82537	Canola	plastid	82.0	27.94
HORVU6Hr1G005220.3	Barley	plastid	83.5	27.93
KRH13605	Soybean	nucleus	82.5	27.92
Bra028922.1-P	Field mustard	plastid	82.5	27.92
GSMUA_Achr9P23240_001	Banana	plastid	85.0	27.78
AT3G13470.1	Thale cress	plastid	82.5	27.68
CDY32855	Canola	plastid	82.0	27.61
CDY11918	Canola	plastid	81.5	27.39
AT1G55490.3	Thale cress	plastid	81.5	27.17
VIT_09s0002g03930.t01	Wine grape	plastid	82.5	27.09
CDY08245	Canola	plastid	81.0	27.0
Solyc01g028810.2.1	Tomato	plastid	80.5	26.88
PGSC0003DMT400061700	Potato	extracellular	80.5	26.88
CDY36809	Canola	plastid	81.5	26.85
CDX75713	Canola	plastid	79.5	26.81
VIT_06s0004g00240.t01	Wine grape	plastid	81.5	26.81
Bra011919.1-P	Field mustard	plastid	81.5	26.81
PGSC0003DMT400006501	Potato	plastid	79.0	26.12
Solyc03g120850.2.1	Tomato	plastid	79.0	26.12
CDY26100	Canola	plastid	80.5	25.64
HORVU2Hr1G011340.1	Barley	cytosol	21.0	25.45
CDX86994	Canola	mitochondrion, plastid	83.0	23.65
Bra030858.1-P	Field mustard	cytosol	81.0	23.51
CDY02438	Canola	cytosol	80.0	22.96
HORVU6Hr1G000180.2	Barley	plastid	74.5	22.89
CDY56074	Canola	plastid	53.0	22.32
CDY23605	Canola	cytosol	47.0	21.66
HORVU2Hr1G077410.18	Barley	plastid	59.0	19.87
CDY10557	Canola	endoplasmic reticulum, plastid	80.0	19.3
CDY43988	Canola	cytosol	47.5	18.48
Bra027431.1-P	Field mustard	cytosol	47.5	18.3
HORVU5Hr1G125130.1	Barley	plastid	50.5	17.21
HORVU2Hr1G007840.7	Barley	mitochondrion, plastid	49.0	15.71
HORVU4Hr1G078820.3	Barley	plastid	47.5	15.06
HORVU1Hr1G079910.1	Barley	mitochondrion, plasma membrane	43.5	14.97
HORVU0Hr1G038830.17	Barley	plastid	43.5	14.75
HORVU1Hr1G038680.8	Barley	mitochondrion	48.0	14.35
CDX85007	Canola	cytosol, plastid	72.0	14.34
HORVU4Hr1G071510.2	Barley	cytosol	23.5	6.6
CDY40825	Canola	endoplasmic reticulum, vacuole	2.0	1.88
Os02t0103100-01	Rice	plasma membrane, vacuole	1.0	1.37

Protein Annotations

Gene3D:1.10.560.10	Gene3D:3.30.260.10	Gene3D:3.50.7.10	MapMan:35.1	UniProt:A0A287JCJ3	InterPro:Chaperonin_Cpn60_CS
InterPro:Chaprnin_Cpn60	ncoils:Coil	InterPro:Cpn60/TCP-1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006457
GO:GO:0008150	GO:GO:0009987	GO:GO:0042026	InterPro:GROEL-like_equatorial_sf	InterPro:GroEL-like_apical_dom_sf	EnsemblPlantsGene:HORVU2Hr1G107410
EnsemblPlants:HORVU2Hr1G107410.2	InterPro:IPR027409	InterPro:IPR027410	InterPro:IPR027413	PFAM:PF00118	PRINTS:PR00298
ScanProsite:PS00296	PANTHER:PTHR11353	PANTHER:PTHR11353:SF102	SUPFAM:SSF48592	InterPro:TCP-1-like_intermed_sf	UniParc:UPI000B47AA8D
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:-:711764235..711765853

Molecular Weight (calculated)

21379.7 Da

IEP (calculated)

5.885

GRAVY (calculated)

-0.066

Length

200 amino acids

Sequence
(BLAST)

001: LRVIEHVSAS EQEYEKEKLN ERIAKLSGGV AVIQVGAQTG TELKEKKLRV EDALNATKAA VEEGIVVGGG CTLLRLASKV NAIKETLEND EQKVGVEIVR
101: KSLSYPLKLI VKNAGVNGSV VTEKVLVNDN FRYGYNAATG KYEDLMVAGI IDPTKVVRCC LEHAASVAKT FITSDAVVVD IKESEQAPAA NPMAGSGYGF

Best Arabidopsis Sequence Match ( AT1G55490.1 )
(BLAST)

001: MASTFTATSS IGSMVAPNGH KSDKKLISKL SSSSFGRRQS VCPRPRRSSS AIVCAAKELH FNKDGTTIRR LQAGVNKLAD LVGVTLGPKG RNVVLESKYG
101: SPRIVNDGVT VAREVELEDP VENIGAKLVR QAAAKTNDLA GDGTTTSVVL AQGFIAEGVK VVAAGANPVL ITRGIEKTAK ALVTELKKMS KEVEDSELAD
201: VAAVSAGNND EIGNMIAEAM SKVGRKGVVT LEEGKSAENN LYVVEGMQFD RGYISPYFVT DSEKMSVEFD NCKLLLVDKK ITNARDLVGV LEDAIRGGYP
301: ILIIAEDIEQ EALATLVVNK LRGTLKIAAL RAPGFGERKS QYLDDIAILT GATVIREEVG LSLDKAGKEV LGNASKVVLT KETSTIVGDG STQDAVKKRV
401: TQIKNLIEQA EQDYEKEKLN ERIAKLSGGV AVIQVGAQTE TELKEKKLRV EDALNATKAA VEEGIVVGGG CTLLRLASKV DAIKATLDND EEKVGADIVK
501: RALSYPLKLI AKNAGVNGSV VSEKVLSNDN VKFGYNAATG KYEDLMAAGI IDPTKVVRCC LEHAASVAKT FLMSDCVVVE IKEPEPVPVG NPMDNSGYGY

Arabidopsis Description

CPN60B1LEN1 [Source:UniProtKB/TrEMBL;Acc:A0A178W724]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.