Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 5
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY59049 | Canola | mitochondrion | 19.72 | 19.27 |
| CDY31193 | Canola | plastid | 18.78 | 16.88 |
| HORVU7Hr1G006490.2 | Barley | cytosol | 41.31 | 15.88 |
| KRH13605 | Soybean | nucleus | 43.66 | 15.74 |
| KRH43861 | Soybean | plastid | 43.66 | 15.71 |
| CDX82537 | Canola | plastid | 42.72 | 15.5 |
| TraesCS4A01G452700.2 | Wheat | plastid | 42.25 | 15.41 |
| Zm00001d035937_P001 | Maize | plastid | 41.78 | 15.37 |
| CDX75713 | Canola | plastid | 42.72 | 15.35 |
| CDY32855 | Canola | plastid | 42.72 | 15.32 |
| CDY72107 | Canola | mitochondrion | 22.07 | 15.31 |
| EER89076 | Sorghum | plastid | 41.31 | 15.2 |
| CDX75715 | Canola | cytosol | 39.91 | 15.1 |
| Os02t0102900-01 | Rice | plastid | 42.25 | 15.05 |
| PGSC0003DMT400061700 | Potato | extracellular | 42.25 | 15.03 |
| Solyc01g028810.2.1 | Tomato | plastid | 42.25 | 15.03 |
| Zm00001d045544_P002 | Maize | plastid | 42.25 | 15.0 |
| CDY11918 | Canola | plastid | 41.78 | 14.96 |
| KXG29249 | Sorghum | plastid | 42.25 | 14.9 |
| GSMUA_Achr3P27620_001 | Banana | plastid | 42.72 | 14.87 |
| TraesCS6B01G011800.1 | Wheat | plastid | 41.31 | 14.84 |
| TraesCS6A01G006400.1 | Wheat | golgi | 41.31 | 14.72 |
| TraesCS6D01G009100.1 | Wheat | golgi | 41.31 | 14.72 |
| GSMUA_Achr9P23240_001 | Banana | plastid | 42.25 | 14.71 |
| CDY36809 | Canola | plastid | 41.78 | 14.66 |
| Os06t0114000-02 | Rice | plastid | 41.31 | 14.64 |
| Zm00001d054089_P002 | Maize | plastid | 42.25 | 14.59 |
| TraesCS7A01G036200.2 | Wheat | golgi | 42.25 | 14.52 |
| CDY08245 | Canola | plastid | 40.85 | 14.5 |
| TraesCS6B01G012100.3 | Wheat | plastid | 40.38 | 14.33 |
| TraesCS7D01G032800.1 | Wheat | cytosol | 42.25 | 14.31 |
| TraesCS6B01G039300.2 | Wheat | plastid | 38.97 | 13.88 |
| HORVU6Hr1G005220.3 | Barley | plastid | 38.97 | 13.88 |
| TraesCS6A01G028100.1 | Wheat | plastid | 38.97 | 13.88 |
| CDY26100 | Canola | plastid | 40.85 | 13.85 |
| TraesCS6D01G031400.1 | Wheat | plastid | 38.5 | 13.71 |
| HORVU6Hr1G000180.2 | Barley | plastid | 40.38 | 13.21 |
| GSMUA_Achr11P... | Banana | plastid | 41.78 | 12.79 |
| TraesCS6B01G012000.1 | Wheat | cytosol | 24.41 | 12.65 |
| CDY66193 | Canola | plastid | 35.68 | 12.52 |
| CDY20555 | Canola | plastid | 35.68 | 12.52 |
| CDX71396 | Canola | plastid | 30.99 | 12.48 |
| CDY02438 | Canola | cytosol | 40.38 | 12.34 |
| CDX83280 | Canola | plastid | 33.33 | 12.2 |
| CDY30514 | Canola | plastid | 33.33 | 12.14 |
| CDY31190 | Canola | plastid | 33.33 | 12.12 |
| CDY23605 | Canola | cytosol | 23.94 | 11.75 |
| CDY04527 | Canola | plastid | 32.39 | 11.58 |
| CDX77147 | Canola | plastid | 33.33 | 11.41 |
| CDY56074 | Canola | plastid | 24.88 | 11.16 |
| CDY10557 | Canola | endoplasmic reticulum, plastid | 40.38 | 10.37 |
| CDX94835 | Canola | mitochondrion | 27.7 | 10.23 |
| CDY47184 | Canola | plastid | 27.7 | 10.21 |
| CDX93002 | Canola | mitochondrion | 25.82 | 10.0 |
| CDY02601 | Canola | plastid | 26.76 | 9.86 |
| CDY43988 | Canola | cytosol | 23.47 | 9.73 |
| CDX82514 | Canola | mitochondrion | 25.82 | 9.62 |
| CDX75733 | Canola | mitochondrion | 25.82 | 9.62 |
| CDY19471 | Canola | mitochondrion | 26.29 | 9.44 |
| CDX84697 | Canola | mitochondrion | 24.88 | 9.41 |
| CDY17152 | Canola | mitochondrion | 24.88 | 9.23 |
| CDY66712 | Canola | mitochondrion | 23.0 | 8.13 |
| CDY37741 | Canola | mitochondrion | 20.66 | 7.2 |
| Zm00001d053279_P001 | Maize | mitochondrion | 4.23 | 5.73 |
| Zm00001d046709_P001 | Maize | mitochondrion | 4.23 | 5.73 |
| CDX72433 | Canola | endoplasmic reticulum | 7.98 | 5.38 |
| CDY68896 | Canola | cytosol | 8.45 | 5.34 |
| Zm00001d037526_P001 | Maize | plastid | 4.23 | 5.08 |
| CDY32775 | Canola | cytosol | 1.88 | 4.71 |
| CDX86994 | Canola | mitochondrion, plastid | 15.49 | 4.7 |
| CDX85007 | Canola | cytosol, plastid | 20.19 | 4.28 |
| CDY59050 | Canola | cytosol | 6.57 | 4.14 |
| CDY10302 | Canola | extracellular | 0.94 | 3.08 |
| HORVU4Hr1G066820.2 | Barley | cytosol | 3.29 | 2.98 |
| CDY56079 | Canola | plastid | 1.41 | 2.24 |
| HORVU5Hr1G074160.1 | Barley | cytosol | 1.88 | 2.05 |
| HORVU4Hr1G076680.1 | Barley | cytosol | 1.88 | 2.02 |
| HORVU2Hr1G107410.2 | Barley | cytosol | 1.88 | 2.0 |
| CDX79518 | Canola | cytosol | 1.88 | 1.98 |
| Zm00001d016540_P001 | Maize | cytosol | 0.0 | 0.0 |
| Os02t0103100-01 | Rice | plasma membrane, vacuole | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.560.10 | Gene3D:3.30.260.10 | MapMan:35.1 | GO:A0A078HQD5 | UniProt:A0A078HQD5 | EnsemblPlants:CDY40825 |
| ProteinID:CDY40825 | ProteinID:CDY40825.1 | InterPro:Cpn60/TCP-1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005524 | InterPro:GROEL-like_equatorial_sf | EnsemblPlantsGene:GSBRNA2T00071758001 | InterPro:IPR027410 | InterPro:IPR027413 | PFAM:PF00118 |
| PANTHER:PTHR11353 | PANTHER:PTHR11353:SF164 | SUPFAM:SSF48592 | SignalP:SignalP-noTM | InterPro:TCP-1-like_intermed_sf | UniParc:UPI0004EEB561 |
| SEG:seg | : | : | : | : | : |
Description
BnaC01g31310DBnaC01g31310D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HQD5]
Coordinates
chrLK032480:-:100709..103495
Molecular Weight (calculated)
23168.4 Da
IEP (calculated)
7.824
GRAVY (calculated)
-0.259
Length
213 amino acids
Sequence
(BLAST)
(BLAST)
001: MFQQVLVLLF VNVRPFHCVC WCEQTCGSCW SYFKSERQKC CSSKKIRFSK NPSETSCSKT NELAGDGTTT SVVLAQGLIA EGARVMAADA NPVLNYQKNR
101: EYHQGSCCRV EEDVKGDSEL ADVAVVSSGN NYDVGNMIAK ALAKVGFKGV FTLEEGKSFV LASDDQGVPD QATKDVCDPI EATRSIPARV PFVSSSRLNS
201: FGGPIQQSSK VKR
101: EYHQGSCCRV EEDVKGDSEL ADVAVVSSGN NYDVGNMIAK ALAKVGFKGV FTLEEGKSFV LASDDQGVPD QATKDVCDPI EATRSIPARV PFVSSSRLNS
201: FGGPIQQSSK VKR
001: MASTFSATSS MGSSLAPPSN RLSSFVSISS SSFGRTQSIA QRKARFPKIY AAKQLHFNKD GTAIKKLQAG VNKLADLVGV TLGPKGRNVV LESKYGSPRI
101: VNDGVTVARE VELEDPVENI GAKLVRQAAS KTNDLAGDGT TTSVVLAQGL IAEGVKVVAA GANPVLITRG IEKTTKALVA ELKKMSKEVE DSELADVAAV
201: SAGNNYEVGN MIAEAMAKVG RKGVVTLEEG KSAENSLYVV EGMQFDRGYI SPYFVTDSEK MCAEYENCKL FLVDKKITNA RDIISILEDA IKGGYPLLII
301: AEDIEQEPLA TLVVNKLRGT IKVAALKAPG FGERKSQYLD DIAALTGATV IREEVGLQLE KVGPEVLGNA GKVVLTKDTT TIVGDGSTEE VVKKRVEQIK
401: NLIEAAEQDY EKEKLNERIA KLSGGVAVIQ VGAQTETELK EKKLRVEDAL NATKAAVEEG IVVGGGCTLL RLASKVDAIK ETLANDEEKV GADIVKKALS
501: YPLKLIAKNA GVNGSVVSEK VLSSDNPKHG YNAATGKYED LMAAGIIDPT KVVRCCLEHA SSVAKTFLMS DCVVVEIKEP ESAAPAGNPM DNSGYGF
101: VNDGVTVARE VELEDPVENI GAKLVRQAAS KTNDLAGDGT TTSVVLAQGL IAEGVKVVAA GANPVLITRG IEKTTKALVA ELKKMSKEVE DSELADVAAV
201: SAGNNYEVGN MIAEAMAKVG RKGVVTLEEG KSAENSLYVV EGMQFDRGYI SPYFVTDSEK MCAEYENCKL FLVDKKITNA RDIISILEDA IKGGYPLLII
301: AEDIEQEPLA TLVVNKLRGT IKVAALKAPG FGERKSQYLD DIAALTGATV IREEVGLQLE KVGPEVLGNA GKVVLTKDTT TIVGDGSTEE VVKKRVEQIK
401: NLIEAAEQDY EKEKLNERIA KLSGGVAVIQ VGAQTETELK EKKLRVEDAL NATKAAVEEG IVVGGGCTLL RLASKVDAIK ETLANDEEKV GADIVKKALS
501: YPLKLIAKNA GVNGSVVSEK VLSSDNPKHG YNAATGKYED LMAAGIIDPT KVVRCCLEHA SSVAKTFLMS DCVVVEIKEP ESAAPAGNPM DNSGYGF
Arabidopsis Description
CPN60B3Chaperonin 60 subunit beta 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:C0Z361]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.