Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 3
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDX79518 | Canola | cytosol | 48.52 | 81.19 |
KXG40202 | Sorghum | cytosol | 76.92 | 63.88 |
CDX93002 | Canola | mitochondrion | 92.01 | 56.55 |
GSMUA_Achr10P... | Banana | cytosol | 23.08 | 56.52 |
CDX94835 | Canola | mitochondrion | 92.31 | 54.07 |
AT3G23990.1 | Thale cress | mitochondrion | 90.24 | 52.86 |
VIT_05s0051g00340.t01 | Wine grape | mitochondrion | 84.32 | 49.57 |
Os10t0462900-01 | Rice | mitochondrion | 82.84 | 48.78 |
KRG90277 | Soybean | mitochondrion | 82.54 | 48.52 |
KRH34594 | Soybean | mitochondrion | 82.54 | 48.35 |
KRG92192 | Soybean | mitochondrion | 82.25 | 48.35 |
KRH33513 | Soybean | mitochondrion | 82.25 | 48.35 |
GSMUA_Achr10P... | Banana | mitochondrion | 82.25 | 48.35 |
GSMUA_Achr1P11160_001 | Banana | mitochondrion | 82.54 | 48.27 |
EER94121 | Sorghum | mitochondrion | 81.95 | 48.01 |
Zm00001d014090_P002 | Maize | mitochondrion | 81.36 | 47.66 |
Os03t0143400-01 | Rice | mitochondrion | 81.36 | 47.66 |
Zm00001d032789_P001 | Maize | plastid | 81.07 | 47.57 |
TraesCS1A01G145000.1 | Wheat | mitochondrion | 80.77 | 47.56 |
TraesCS1B01G162300.1 | Wheat | mitochondrion | 80.47 | 47.39 |
TraesCS1D01G144000.1 | Wheat | mitochondrion | 80.47 | 47.39 |
TraesCS4A01G409100.1 | Wheat | mitochondrion | 80.18 | 47.05 |
TraesCS4B01G307700.1 | Wheat | mitochondrion | 79.88 | 46.88 |
CDX84697 | Canola | mitochondrion | 75.74 | 45.47 |
CDY19471 | Canola | mitochondrion | 78.99 | 45.03 |
CDY17152 | Canola | mitochondrion | 74.85 | 44.08 |
HORVU4Hr1G078820.3 | Barley | plastid | 79.88 | 42.79 |
HORVU1Hr1G038680.8 | Barley | mitochondrion | 81.95 | 41.41 |
TraesCS4D01G305900.1 | Wheat | golgi | 79.88 | 41.03 |
CDY68896 | Canola | cytosol | 40.24 | 40.36 |
CDY32775 | Canola | cytosol | 10.06 | 40.0 |
CDX82514 | Canola | mitochondrion | 63.91 | 37.76 |
CDX75733 | Canola | mitochondrion | 63.91 | 37.76 |
TraesCS4B01G266200.1 | Wheat | cytosol | 46.15 | 37.59 |
CDY66712 | Canola | mitochondrion | 58.88 | 33.0 |
CDX72433 | Canola | endoplasmic reticulum | 30.47 | 32.59 |
CDY37741 | Canola | mitochondrion | 57.69 | 31.91 |
CDY11918 | Canola | plastid | 46.45 | 26.39 |
CDX75715 | Canola | cytosol | 43.49 | 26.11 |
CDY32855 | Canola | plastid | 45.56 | 25.93 |
CDY36809 | Canola | plastid | 46.45 | 25.86 |
CDY56079 | Canola | plastid | 10.06 | 25.37 |
CDX82537 | Canola | plastid | 43.49 | 25.04 |
CDX75713 | Canola | plastid | 43.49 | 24.79 |
CDX83280 | Canola | plastid | 41.72 | 24.23 |
CDY08245 | Canola | plastid | 42.9 | 24.17 |
CDY30514 | Canola | plastid | 41.42 | 23.93 |
CDY31190 | Canola | plastid | 41.42 | 23.89 |
CDY04527 | Canola | plastid | 42.01 | 23.83 |
CDY26100 | Canola | plastid | 43.2 | 23.25 |
CDY23605 | Canola | cytosol | 28.99 | 22.58 |
CDY66193 | Canola | plastid | 40.53 | 22.57 |
CDY20555 | Canola | plastid | 40.53 | 22.57 |
CDX77147 | Canola | plastid | 41.42 | 22.51 |
CDY10302 | Canola | extracellular | 4.14 | 21.54 |
CDY02601 | Canola | plastid | 36.69 | 21.45 |
CDY47184 | Canola | plastid | 36.39 | 21.28 |
CDY02438 | Canola | cytosol | 43.79 | 21.23 |
CDX86994 | Canola | mitochondrion, plastid | 42.9 | 20.66 |
CDX71396 | Canola | plastid | 32.25 | 20.6 |
CDY43988 | Canola | cytosol | 29.59 | 19.46 |
HORVU4Hr1G071510.2 | Barley | cytosol | 39.05 | 18.54 |
CDY10557 | Canola | endoplasmic reticulum, plastid | 43.79 | 17.85 |
CDY72107 | Canola | mitochondrion | 13.91 | 15.31 |
CDY56074 | Canola | plastid | 21.01 | 14.95 |
CDX85007 | Canola | cytosol, plastid | 32.84 | 11.06 |
CDY59049 | Canola | mitochondrion | 4.73 | 7.34 |
CDY31193 | Canola | plastid | 5.03 | 7.17 |
CDY40825 | Canola | endoplasmic reticulum, vacuole | 4.14 | 6.57 |
Protein Annotations
Gene3D:1.10.560.10 | Gene3D:3.30.260.10 | Gene3D:3.50.7.10 | MapMan:35.1 | GO:A0A078J4V4 | UniProt:A0A078J4V4 |
EnsemblPlants:CDY59050 | ProteinID:CDY59050 | ProteinID:CDY59050.1 | InterPro:Chaprnin_Cpn60 | InterPro:Cpn60/TCP-1 | GO:GO:0000166 |
GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
GO:GO:0005737 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0042026 | InterPro:GROEL-like_equatorial_sf | EnsemblPlantsGene:GSBRNA2T00025486001 |
InterPro:GroEL-like_apical_dom_sf | InterPro:IPR027409 | InterPro:IPR027410 | InterPro:IPR027413 | PFAM:PF00118 | PRINTS:PR00298 |
PANTHER:PTHR11353 | PANTHER:PTHR11353:SF85 | SUPFAM:SSF48592 | SUPFAM:SSF52029 | InterPro:TCP-1-like_intermed_sf | UniParc:UPI0004EEB051 |
SEG:seg | : | : | : | : | : |
Description
BnaC07g48200DBnaC07g48200D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J4V4]
Coordinates
chrLK033721:+:17757..20324
Molecular Weight (calculated)
35745.1 Da
IEP (calculated)
4.532
GRAVY (calculated)
0.004
Length
338 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPRSDVGFS AQRTFPRLVP FPDQTNSIVK VLELAMKRQR PLLIVSEDVE SEALATLILN KLRAGIKVCA IKAPGFGENR KANLQDLAAL TGGEVITDEL
101: GINLENVDLG MLGTCKIVTV SKDDTVILDG AGDKTAIEER CEQIRSAIEL STSDYDKEKL QERLTKLSGG VAVLKIGGAS EAEVCEKKDR VTDALNATKA
201: TVEEGILPGG GVALLYAARE LEKLATANFD QKIGVQIIQN ALKTPVHTIA SNAGVEGAVI VGKLMEQDNT DLGYDAAKGE YVDMVKAGII DPLKVIRTAL
301: VDAASVSSLL TTTEAVVVEL PKDESEAAGM GGMGGMDH
101: GINLENVDLG MLGTCKIVTV SKDDTVILDG AGDKTAIEER CEQIRSAIEL STSDYDKEKL QERLTKLSGG VAVLKIGGAS EAEVCEKKDR VTDALNATKA
201: TVEEGILPGG GVALLYAARE LEKLATANFD QKIGVQIIQN ALKTPVHTIA SNAGVEGAVI VGKLMEQDNT DLGYDAAKGE YVDMVKAGII DPLKVIRTAL
301: VDAASVSSLL TTTEAVVVEL PKDESEAAGM GGMGGMDH
001: MYRLVSNVAS KARIARKCTS QIGSRLNSTR NYAAKDIRFG VEARALMLRG VEDLADAVKV TMGPKGRNVI IEQSWGAPKV TKDGVTVAKS IEFKDRIKNV
101: GASLVKQVAN ATNDVAGDGT TCATVLTRAI FTEGCKSVAA GMNAMDLRRG IKLAVDTVVT NLQSRARMIS TSEEIAQVGT ISANGDREIG ELIAKAMETV
201: GKEGVITIQD GKTLFNELEV VEGMKIDRGY ISPYFITNPK TQKCELEDPL ILIHEKKISN INAMVKVLEL ALKKQRPLLI VAEDVESDAL ATLILNKLRA
301: NIKVCAVKAP GFGENRKANL HDLAALTGAQ VITEELGMNL DNIDLSMFGN CKKVTVSKDD TVVLDGAGDK QAIGERCEQI RSMVEASTSD YDKEKLQERL
401: AKLSGGVAVL KIGGASETEV SEKKDRVTDA LNATKAAVEE GIVPGGGVAL LYASKELEKL STANFDQKIG VQIIQNALKT PVYTIASNAG VEGAVVVGKL
501: LEQDNPDLGY DAAKGEYVDM IKAGIIDPLK VIRTALVDAA SVSSLLTTTE AVVTEIPTKE VASPGMGGGG MGGMGGMGGM GGMGF
101: GASLVKQVAN ATNDVAGDGT TCATVLTRAI FTEGCKSVAA GMNAMDLRRG IKLAVDTVVT NLQSRARMIS TSEEIAQVGT ISANGDREIG ELIAKAMETV
201: GKEGVITIQD GKTLFNELEV VEGMKIDRGY ISPYFITNPK TQKCELEDPL ILIHEKKISN INAMVKVLEL ALKKQRPLLI VAEDVESDAL ATLILNKLRA
301: NIKVCAVKAP GFGENRKANL HDLAALTGAQ VITEELGMNL DNIDLSMFGN CKKVTVSKDD TVVLDGAGDK QAIGERCEQI RSMVEASTSD YDKEKLQERL
401: AKLSGGVAVL KIGGASETEV SEKKDRVTDA LNATKAAVEE GIVPGGGVAL LYASKELEKL STANFDQKIG VQIIQNALKT PVYTIASNAG VEGAVVVGKL
501: LEQDNPDLGY DAAKGEYVDM IKAGIIDPLK VIRTALVDAA SVSSLLTTTE AVVTEIPTKE VASPGMGGGG MGGMGGMGGM GGMGF
Arabidopsis Description
HSP60-2Chaperonin CPN60-like 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8L7B5]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.