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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX79518 Canola cytosol 48.52 81.19
KXG40202 Sorghum cytosol 76.92 63.88
CDX93002 Canola mitochondrion 92.01 56.55
GSMUA_Achr10P... Banana cytosol 23.08 56.52
CDX94835 Canola mitochondrion 92.31 54.07
AT3G23990.1 Thale cress mitochondrion 90.24 52.86
VIT_05s0051g00340.t01 Wine grape mitochondrion 84.32 49.57
Os10t0462900-01 Rice mitochondrion 82.84 48.78
KRG90277 Soybean mitochondrion 82.54 48.52
KRH34594 Soybean mitochondrion 82.54 48.35
KRG92192 Soybean mitochondrion 82.25 48.35
KRH33513 Soybean mitochondrion 82.25 48.35
GSMUA_Achr10P... Banana mitochondrion 82.25 48.35
GSMUA_Achr1P11160_001 Banana mitochondrion 82.54 48.27
EER94121 Sorghum mitochondrion 81.95 48.01
Zm00001d014090_P002 Maize mitochondrion 81.36 47.66
Os03t0143400-01 Rice mitochondrion 81.36 47.66
Zm00001d032789_P001 Maize plastid 81.07 47.57
TraesCS1A01G145000.1 Wheat mitochondrion 80.77 47.56
TraesCS1B01G162300.1 Wheat mitochondrion 80.47 47.39
TraesCS1D01G144000.1 Wheat mitochondrion 80.47 47.39
TraesCS4A01G409100.1 Wheat mitochondrion 80.18 47.05
TraesCS4B01G307700.1 Wheat mitochondrion 79.88 46.88
CDX84697 Canola mitochondrion 75.74 45.47
CDY19471 Canola mitochondrion 78.99 45.03
CDY17152 Canola mitochondrion 74.85 44.08
HORVU4Hr1G078820.3 Barley plastid 79.88 42.79
HORVU1Hr1G038680.8 Barley mitochondrion 81.95 41.41
TraesCS4D01G305900.1 Wheat golgi 79.88 41.03
CDY68896 Canola cytosol 40.24 40.36
CDY32775 Canola cytosol 10.06 40.0
CDX82514 Canola mitochondrion 63.91 37.76
CDX75733 Canola mitochondrion 63.91 37.76
TraesCS4B01G266200.1 Wheat cytosol 46.15 37.59
CDY66712 Canola mitochondrion 58.88 33.0
CDX72433 Canola endoplasmic reticulum 30.47 32.59
CDY37741 Canola mitochondrion 57.69 31.91
CDY11918 Canola plastid 46.45 26.39
CDX75715 Canola cytosol 43.49 26.11
CDY32855 Canola plastid 45.56 25.93
CDY36809 Canola plastid 46.45 25.86
CDY56079 Canola plastid 10.06 25.37
CDX82537 Canola plastid 43.49 25.04
CDX75713 Canola plastid 43.49 24.79
CDX83280 Canola plastid 41.72 24.23
CDY08245 Canola plastid 42.9 24.17
CDY30514 Canola plastid 41.42 23.93
CDY31190 Canola plastid 41.42 23.89
CDY04527 Canola plastid 42.01 23.83
CDY26100 Canola plastid 43.2 23.25
CDY23605 Canola cytosol 28.99 22.58
CDY66193 Canola plastid 40.53 22.57
CDY20555 Canola plastid 40.53 22.57
CDX77147 Canola plastid 41.42 22.51
CDY10302 Canola extracellular 4.14 21.54
CDY02601 Canola plastid 36.69 21.45
CDY47184 Canola plastid 36.39 21.28
CDY02438 Canola cytosol 43.79 21.23
CDX86994 Canola mitochondrion, plastid 42.9 20.66
CDX71396 Canola plastid 32.25 20.6
CDY43988 Canola cytosol 29.59 19.46
HORVU4Hr1G071510.2 Barley cytosol 39.05 18.54
CDY10557 Canola endoplasmic reticulum, plastid 43.79 17.85
CDY72107 Canola mitochondrion 13.91 15.31
CDY56074 Canola plastid 21.01 14.95
CDX85007 Canola cytosol, plastid 32.84 11.06
CDY59049 Canola mitochondrion 4.73 7.34
CDY31193 Canola plastid 5.03 7.17
CDY40825 Canola endoplasmic reticulum, vacuole 4.14 6.57
Protein Annotations
Gene3D:1.10.560.10Gene3D:3.30.260.10Gene3D:3.50.7.10MapMan:35.1GO:A0A078J4V4UniProt:A0A078J4V4
EnsemblPlants:CDY59050ProteinID:CDY59050ProteinID:CDY59050.1InterPro:Chaprnin_Cpn60InterPro:Cpn60/TCP-1GO:GO:0000166
GO:GO:0003674GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0008150GO:GO:0009987GO:GO:0042026InterPro:GROEL-like_equatorial_sfEnsemblPlantsGene:GSBRNA2T00025486001
InterPro:GroEL-like_apical_dom_sfInterPro:IPR027409InterPro:IPR027410InterPro:IPR027413PFAM:PF00118PRINTS:PR00298
PANTHER:PTHR11353PANTHER:PTHR11353:SF85SUPFAM:SSF48592SUPFAM:SSF52029InterPro:TCP-1-like_intermed_sfUniParc:UPI0004EEB051
SEG:seg:::::
Description
BnaC07g48200DBnaC07g48200D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J4V4]
Coordinates
chrLK033721:+:17757..20324
Molecular Weight (calculated)
35745.1 Da
IEP (calculated)
4.532
GRAVY (calculated)
0.004
Length
338 amino acids
Sequence
(BLAST)
001: MAPRSDVGFS AQRTFPRLVP FPDQTNSIVK VLELAMKRQR PLLIVSEDVE SEALATLILN KLRAGIKVCA IKAPGFGENR KANLQDLAAL TGGEVITDEL
101: GINLENVDLG MLGTCKIVTV SKDDTVILDG AGDKTAIEER CEQIRSAIEL STSDYDKEKL QERLTKLSGG VAVLKIGGAS EAEVCEKKDR VTDALNATKA
201: TVEEGILPGG GVALLYAARE LEKLATANFD QKIGVQIIQN ALKTPVHTIA SNAGVEGAVI VGKLMEQDNT DLGYDAAKGE YVDMVKAGII DPLKVIRTAL
301: VDAASVSSLL TTTEAVVVEL PKDESEAAGM GGMGGMDH
Best Arabidopsis Sequence Match ( AT2G33210.1 )
(BLAST)
001: MYRLVSNVAS KARIARKCTS QIGSRLNSTR NYAAKDIRFG VEARALMLRG VEDLADAVKV TMGPKGRNVI IEQSWGAPKV TKDGVTVAKS IEFKDRIKNV
101: GASLVKQVAN ATNDVAGDGT TCATVLTRAI FTEGCKSVAA GMNAMDLRRG IKLAVDTVVT NLQSRARMIS TSEEIAQVGT ISANGDREIG ELIAKAMETV
201: GKEGVITIQD GKTLFNELEV VEGMKIDRGY ISPYFITNPK TQKCELEDPL ILIHEKKISN INAMVKVLEL ALKKQRPLLI VAEDVESDAL ATLILNKLRA
301: NIKVCAVKAP GFGENRKANL HDLAALTGAQ VITEELGMNL DNIDLSMFGN CKKVTVSKDD TVVLDGAGDK QAIGERCEQI RSMVEASTSD YDKEKLQERL
401: AKLSGGVAVL KIGGASETEV SEKKDRVTDA LNATKAAVEE GIVPGGGVAL LYASKELEKL STANFDQKIG VQIIQNALKT PVYTIASNAG VEGAVVVGKL
501: LEQDNPDLGY DAAKGEYVDM IKAGIIDPLK VIRTALVDAA SVSSLLTTTE AVVTEIPTKE VASPGMGGGG MGGMGGMGGM GGMGF
Arabidopsis Description
HSP60-2Chaperonin CPN60-like 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8L7B5]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.