CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 7
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY37741	Canola	mitochondrion	90.71	89.53
CDX84697	Canola	mitochondrion	68.49	73.36
CDY72107	Canola	mitochondrion	37.15	72.96
CDX79518	Canola	cytosol	24.05	71.78
CDY19471	Canola	mitochondrion	69.65	70.83
CDY17152	Canola	mitochondrion	67.33	70.73
AT2G33210.1	Thale cress	mitochondrion	68.33	70.43
GSMUA_Achr10P...	Banana	mitochondrion	62.85	65.91
Zm00001d014090_P002	Maize	mitochondrion	62.35	65.16
CDX94835	Canola	mitochondrion	62.35	65.16
TraesCS1D01G144000.1	Wheat	mitochondrion	62.02	65.16
Os10t0462900-01	Rice	mitochondrion	61.86	64.98
Zm00001d032789_P001	Maize	plastid	62.02	64.93
EER94121	Sorghum	mitochondrion	62.02	64.82
TraesCS1B01G162300.1	Wheat	mitochondrion	61.69	64.81
TraesCS1A01G145000.1	Wheat	mitochondrion	61.69	64.81
CDX93002	Canola	mitochondrion	59.04	64.73
Solyc05g053470.2.1	Tomato	plastid	61.19	64.4
PGSC0003DMT400069855	Potato	mitochondrion	61.19	64.4
Os03t0143400-01	Rice	mitochondrion	61.53	64.3
GSMUA_Achr1P11160_001	Banana	mitochondrion	61.53	64.19
TraesCS4B01G307700.1	Wheat	mitochondrion	60.86	63.72
TraesCS4A01G409100.1	Wheat	mitochondrion	60.86	63.72
PGSC0003DMT400030265	Potato	mitochondrion	60.7	63.65
Solyc09g091180.2.1	Tomato	extracellular, mitochondrion, nucleus, unclear	60.36	62.87
KXG40202	Sorghum	cytosol	42.12	62.41
CDY59050	Canola	cytosol	33.0	58.88
HORVU4Hr1G078820.3	Barley	plastid	60.53	57.84
CDY59049	Canola	mitochondrion	20.73	57.34
HORVU1Hr1G038680.8	Barley	mitochondrion	62.02	55.9
TraesCS4D01G305900.1	Wheat	golgi	60.86	55.78
CDX82514	Canola	mitochondrion	52.4	55.24
CDX75733	Canola	mitochondrion	52.07	54.9
TraesCS4B01G266200.1	Wheat	cytosol	33.5	48.67
GSMUA_Achr10P...	Banana	cytosol	10.12	44.2
CDY11918	Canola	plastid	36.15	36.64
CDY32855	Canola	plastid	35.99	36.53
CDY68896	Canola	cytosol	20.23	36.2
CDX82537	Canola	plastid	34.99	35.95
CDX75715	Canola	cytosol	33.5	35.88
CDY08245	Canola	plastid	35.32	35.5
CDY36809	Canola	plastid	35.66	35.42
CDX75713	Canola	plastid	34.83	35.41
CDX83280	Canola	plastid	33.5	34.71
CDY30514	Canola	plastid	33.5	34.53
CDY31190	Canola	plastid	33.33	34.3
CDY20555	Canola	plastid	34.33	34.1
CDY26100	Canola	plastid	35.32	33.92
CDY04527	Canola	plastid	33.5	33.89
CDY66193	Canola	plastid	33.83	33.61
CDX72433	Canola	endoplasmic reticulum	17.25	32.91
CDY23605	Canola	cytosol	23.55	32.72
CDX71396	Canola	plastid	28.52	32.51
CDX77147	Canola	plastid	33.5	32.48
CDY02601	Canola	plastid	30.18	31.49
CDY47184	Canola	plastid	30.02	31.31
HORVU4Hr1G071510.2	Barley	cytosol	36.32	30.76
CDY02438	Canola	cytosol	35.49	30.7
CDY32775	Canola	cytosol	4.31	30.59
CDY56074	Canola	plastid	22.72	28.84
CDY31193	Canola	plastid	10.61	27.0
CDY43988	Canola	cytosol	22.39	26.26
CDY10557	Canola	endoplasmic reticulum, plastid	35.49	25.81
CDY10302	Canola	extracellular	2.65	24.62
CDY40825	Canola	endoplasmic reticulum, vacuole	8.13	23.0
CDX86994	Canola	mitochondrion, plastid	25.04	21.51
CDY56079	Canola	plastid	3.98	17.91
CDX85007	Canola	cytosol, plastid	20.9	12.55

Protein Annotations

MapMan:35.1	GO:A0A078JMW7	UniProt:A0A078JMW7	EnsemblPlants:CDY66712	ProteinID:CDY66712	ProteinID:CDY66712.1
InterPro:Chaprnin_Cpn60	InterPro:Cpn60/TCP-1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0009987
GO:GO:0042026	InterPro:GROEL-like_equatorial_sf	EnsemblPlantsGene:GSBRNA2T00055616001	InterPro:GroEL-like_apical_dom_sf	InterPro:IPR027409	InterPro:IPR027410
InterPro:IPR027413	PFAM:PF00118	PRINTS:PR00298	PANTHER:PTHR11353	PANTHER:PTHR11353:SF85	SUPFAM:SSF48592
SUPFAM:SSF52029	SUPFAM:SSF54849	InterPro:TCP-1-like_intermed_sf	UniParc:UPI0004EE0825	:	:

Description

BnaCnng52030DBnaCnng52030D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JMW7]

Coordinates

chrLK035420:+:6165..9878

Molecular Weight (calculated)

65226.3 Da

IEP (calculated)

7.470

GRAVY (calculated)

-0.225

Length

603 amino acids

Sequence
(BLAST)

001: MYRLVSNIAS QARNARKCTT QFGSMLSSTR SYSEKDIRSG VKELADTGQV TMGPKGCNVT IEQKDDGSIT ITQSWRAPKV TKDDVTVAKS NESKGRVKNV
101: GASPVKQVAK ATNNVAGDGT TYATVLTRAI FTEGCKSVTP EKSAYHAAYR AMHLRLGIKL AVDTVLKNLK SRARMISTFE EIAQVGTASA NGDREIGELI
201: AKAMESVGKE GVITVQGGNT LFNELEVVEG MKIDRGYRSP LFITNEKYQT CELEDPLILI HEKEITSPDS TSTVLESALR FVNDPLLYIH DNKVHNIESL
301: SKVLDLALKK QRSLLIIAED LDSFSVAGLV WKTPRSHHIC AVKAPGFGEN HRAYMHDLAT LTGAQARPLK GMSLEKIELG MLGTCKKVTV SKDNTVFIGG
401: AGDKKYIGER CEQIRSMVET SESGYDKDML QDRLAKLSES VAVIKIGGTS EREISEKIDR VNNALNATKA ALEEGIVPGG GVALLYASKE LEKLSTNYIS
501: QEIGVQIIQN ALKIPVYIIA SNAGVDGKVI VDKLLESNNP DIGYDAAKGE YVDMVKSGNI DPVKMIRTAL ADAARDSNAV VTEIPTKEDA FPVMGGGCGC
601: MGF

Best Arabidopsis Sequence Match ( AT2G33210.1 )
(BLAST)

001: MYRLVSNVAS KARIARKCTS QIGSRLNSTR NYAAKDIRFG VEARALMLRG VEDLADAVKV TMGPKGRNVI IEQSWGAPKV TKDGVTVAKS IEFKDRIKNV
101: GASLVKQVAN ATNDVAGDGT TCATVLTRAI FTEGCKSVAA GMNAMDLRRG IKLAVDTVVT NLQSRARMIS TSEEIAQVGT ISANGDREIG ELIAKAMETV
201: GKEGVITIQD GKTLFNELEV VEGMKIDRGY ISPYFITNPK TQKCELEDPL ILIHEKKISN INAMVKVLEL ALKKQRPLLI VAEDVESDAL ATLILNKLRA
301: NIKVCAVKAP GFGENRKANL HDLAALTGAQ VITEELGMNL DNIDLSMFGN CKKVTVSKDD TVVLDGAGDK QAIGERCEQI RSMVEASTSD YDKEKLQERL
401: AKLSGGVAVL KIGGASETEV SEKKDRVTDA LNATKAAVEE GIVPGGGVAL LYASKELEKL STANFDQKIG VQIIQNALKT PVYTIASNAG VEGAVVVGKL
501: LEQDNPDLGY DAAKGEYVDM IKAGIIDPLK VIRTALVDAA SVSSLLTTTE AVVTEIPTKE VASPGMGGGG MGGMGGMGGM GGMGF

Arabidopsis Description

HSP60-2Chaperonin CPN60-like 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8L7B5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.