CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX71396	Canola	plastid	77.64	34.78
CDX83280	Canola	plastid	81.43	33.16
CDY31190	Canola	plastid	81.86	33.11
CDY30514	Canola	plastid	80.17	32.48
CDY04527	Canola	plastid	78.48	31.21
CDX77147	Canola	plastid	79.75	30.39
CDY59049	Canola	mitochondrion	24.89	27.06
CDY72107	Canola	mitochondrion	33.33	25.73
CDY47184	Canola	plastid	48.95	20.07
CDY02601	Canola	plastid	48.1	19.72
CDY40825	Canola	endoplasmic reticulum, vacuole	16.88	18.78
CDY32855	Canola	plastid	41.77	16.67
CDY11918	Canola	plastid	41.35	16.47
CDY56074	Canola	plastid	32.91	16.42
CDX82537	Canola	plastid	40.51	16.35
CDX75713	Canola	plastid	40.51	16.19
CDY08245	Canola	plastid	40.51	16.0
CDY36809	Canola	plastid	40.93	15.98
CDX75715	Canola	cytosol	37.55	15.81
CDY26100	Canola	plastid	40.51	15.29
CDX94835	Canola	mitochondrion	36.29	14.9
CDX84697	Canola	mitochondrion	35.02	14.74
CDY20555	Canola	plastid	37.55	14.66
CDY66193	Canola	plastid	37.13	14.5
CDY17152	Canola	mitochondrion	35.02	14.46
CDY19471	Canola	mitochondrion	35.44	14.17
CDY02438	Canola	cytosol	40.51	13.77
CDX93002	Canola	mitochondrion	30.38	13.09
CDX75733	Canola	mitochondrion	31.22	12.94
CDX82514	Canola	mitochondrion	31.22	12.94
CDY10557	Canola	endoplasmic reticulum, plastid	40.51	11.58
CDY66712	Canola	mitochondrion	27.0	10.61
CDY37741	Canola	mitochondrion	27.0	10.47
CDY23605	Canola	cytosol	18.57	10.14
CDY43988	Canola	cytosol	20.25	9.34
CDY10302	Canola	extracellular	2.53	9.23
CDY59050	Canola	cytosol	7.17	5.03
CDY68896	Canola	cytosol	6.33	4.45
CDX85007	Canola	cytosol, plastid	13.92	3.29
CDX72433	Canola	endoplasmic reticulum	3.8	2.85
CDX86994	Canola	mitochondrion, plastid	7.59	2.56
CDX79518	Canola	cytosol	1.69	1.98
CDY32775	Canola	cytosol	0.42	1.18
CDY56079	Canola	plastid	0.42	0.75

Protein Annotations

Gene3D:1.10.560.10	MapMan:35.1	GO:A0A078H2W4	UniProt:A0A078H2W4	EnsemblPlants:CDY31193	ProteinID:CDY31193
ProteinID:CDY31193.1	InterPro:Chaperone_TCP-1	InterPro:Cpn60/TCP-1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	InterPro:GROEL-like_equatorial_sf	EnsemblPlantsGene:GSBRNA2T00047312001	InterPro:IPR027413	PFAM:PF00118	PRINTS:PR00304
PANTHER:PTHR11353	PANTHER:PTHR11353:SF175	SUPFAM:SSF48592	UniParc:UPI0004EF3B6C	SEG:seg	:

Description

BnaC03g46980DBnaC03g46980D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H2W4]

Coordinates

chrLK032268:+:283298..293566

Molecular Weight (calculated)

25657.1 Da

IEP (calculated)

11.059

GRAVY (calculated)

-0.213

Length

237 amino acids

Sequence
(BLAST)

001: MASTNALSSA SSVLCSSRQG KLSGVNQQKG QRVSYSKANR RFSVRANVKE ISFDQSSRAA LQAGIDKLAD AVGLTLGPRG RNVVLDEFGS PKVVNDGVTI
101: ARAIELPDAM ENAGAALIRE VASKTNDSAG DGTTTASVLA REIIKHGLLS VTSGANPVSL KRGIDKTVQA LIEELEKKAR PVKGGSDIQG TNFFLLSPML
201: IVKTDMHVKR LWRLIHFTKK HFNFLKKKTF QLLIQKR

Best Arabidopsis Sequence Match ( AT2G28000.1 )
(BLAST)

001: MASANALSSA SVLCSSRQSK LGGGNQQQGQ RVSYNKRTIR RFSVRANVKE IAFDQHSRAA LQAGIDKLAD CVGLTLGPRG RNVVLDEFGS PKVVNDGVTI
101: ARAIELPNAM ENAGAALIRE VASKTNDSAG DGTTTASILA REIIKHGLLS VTSGANPVSL KRGIDKTVQG LIEELQKKAR PVKGRDDIRA VASISAGNDD
201: LIGSMIADAI DKVGPDGVLS IESSSSFETT VEVEEGMEID RGYISPQFVT NPEKLLAEFE NARVLITDQK ITAIKDIIPI LEKTTQLRAP LLIIAEDVTG
301: EALATLVVNK LRGVLNVVAV KAPGFGERRK AMLQDIAILT GAEYLAMDMS LLVENATIDQ LGIARKVTIS KDSTTLIADA ASKDELQARI AQLKKELFET
401: DSVYDSEKLA ERIAKLSGGV AVIKVGAATE TELEDRKLRI EDAKNATFAA IEEGIVPGGG AALVHLSTVI PAIKETFEDA DERLGADIVQ KALLSPAALI
501: AQNAGVEGEV VVEKIMFSDW ENGYNAMTDT YENLFEAGVI DPAKVTRCAL QNAASVAGMV LTTQAIVVDK PKPKAPAAAA PEGLMV

Arabidopsis Description

CPN60A1SLP [Source:UniProtKB/TrEMBL;Acc:A0A178VZW6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.