Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 7
PPI
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT3G13860.1 | CDY11931 | AT5G56360.1 | 21798944 |
AT3G13860.1 | CDY32789 | AT5G56360.1 | 21798944 |
AT3G13860.1 | CDY36796 | AT5G56360.1 | 21798944 |
AT3G13860.1 | CDY46579 | AT5G56360.1 | 21798944 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra001524.1-P | Field mustard | mitochondrion | 99.83 | 99.83 |
CDX75733 | Canola | mitochondrion | 99.3 | 99.3 |
AT3G13860.1 | Thale cress | mitochondrion | 93.88 | 93.88 |
PGSC0003DMT400006642 | Potato | cytosol | 73.25 | 82.0 |
Solyc03g121640.2.1 | Tomato | plastid | 79.02 | 78.88 |
KRH47114 | Soybean | mitochondrion | 79.02 | 78.75 |
KRH44140 | Soybean | mitochondrion | 78.85 | 78.57 |
VIT_09s0002g02240.t01 | Wine grape | mitochondrion | 74.65 | 77.5 |
GSMUA_Achr7P24090_001 | Banana | cytosol | 68.71 | 74.15 |
CDY72107 | Canola | mitochondrion | 38.29 | 71.34 |
CDX94835 | Canola | mitochondrion | 70.8 | 70.19 |
CDX93002 | Canola | mitochondrion | 67.48 | 70.18 |
EES19881 | Sorghum | mitochondrion | 70.28 | 69.19 |
Zm00001d038857_P001 | Maize | mitochondrion | 70.1 | 69.14 |
TraesCS1D01G365800.1 | Wheat | mitochondrion | 69.76 | 69.03 |
Os05t0540300-01 | Rice | mitochondrion | 70.1 | 69.02 |
HORVU1Hr1G079910.1 | Barley | mitochondrion, plasma membrane | 69.93 | 68.85 |
TraesCS1A01G361400.1 | Wheat | mitochondrion | 69.58 | 68.74 |
TraesCS1B01G378000.1 | Wheat | mitochondrion | 69.76 | 68.44 |
CDX84697 | Canola | mitochondrion | 67.31 | 68.38 |
CDY17152 | Canola | mitochondrion | 66.43 | 66.2 |
CDY19471 | Canola | mitochondrion | 68.36 | 65.94 |
CDX79518 | Canola | cytosol | 23.08 | 65.35 |
CDY59049 | Canola | mitochondrion | 24.65 | 64.68 |
CDY59050 | Canola | cytosol | 37.76 | 63.91 |
CDY66712 | Canola | mitochondrion | 55.24 | 52.4 |
CDY37741 | Canola | mitochondrion | 54.9 | 51.39 |
CDX75713 | Canola | plastid | 43.88 | 42.33 |
CDX82537 | Canola | plastid | 43.36 | 42.25 |
CDX75715 | Canola | cytosol | 40.91 | 41.56 |
CDY68896 | Canola | cytosol | 24.48 | 41.54 |
CDY11918 | Canola | plastid | 43.01 | 41.34 |
CDY32855 | Canola | plastid | 42.66 | 41.08 |
CDY36809 | Canola | plastid | 42.66 | 40.2 |
CDY08245 | Canola | plastid | 42.13 | 40.17 |
CDX83280 | Canola | plastid | 40.03 | 39.35 |
CDY30514 | Canola | plastid | 40.21 | 39.32 |
CDY31190 | Canola | plastid | 39.86 | 38.91 |
CDY04527 | Canola | plastid | 40.21 | 38.59 |
CDY26100 | Canola | plastid | 42.31 | 38.53 |
CDX72433 | Canola | endoplasmic reticulum | 20.98 | 37.97 |
CDY20555 | Canola | plastid | 40.21 | 37.89 |
CDX71396 | Canola | plastid | 34.97 | 37.81 |
CDY66193 | Canola | plastid | 39.86 | 37.56 |
CDX77147 | Canola | plastid | 40.38 | 37.14 |
CDY23605 | Canola | cytosol | 28.15 | 37.1 |
CDY02438 | Canola | cytosol | 42.66 | 35.01 |
CDY02601 | Canola | plastid | 35.31 | 34.95 |
CDY47184 | Canola | plastid | 35.14 | 34.78 |
CDY56074 | Canola | plastid | 27.27 | 32.84 |
CDY43988 | Canola | cytosol | 28.15 | 31.32 |
CDY31193 | Canola | plastid | 12.94 | 31.22 |
CDY10557 | Canola | endoplasmic reticulum, plastid | 42.66 | 29.43 |
CDY32775 | Canola | cytosol | 4.37 | 29.41 |
CDY40825 | Canola | endoplasmic reticulum, vacuole | 9.62 | 25.82 |
CDX86994 | Canola | mitochondrion, plastid | 29.72 | 24.22 |
CDY10302 | Canola | extracellular | 2.62 | 23.08 |
CDY56079 | Canola | plastid | 5.07 | 21.64 |
CDX85007 | Canola | cytosol, plastid | 24.65 | 14.04 |
Protein Annotations
Gene3D:1.10.560.10 | MapMan:19.1.7.1 | Gene3D:3.30.260.10 | Gene3D:3.50.7.10 | GO:A0A078D2R2 | EnsemblPlants:CDX82514 |
ProteinID:CDX82514 | ProteinID:CDX82514.1 | InterPro:Chaperonin_Cpn60_CS | InterPro:Chaprnin_Cpn60 | ncoils:Coil | InterPro:Cpn60/TCP-1 |
GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 |
GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006457 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0042026 |
InterPro:GROEL-like_equatorial_sf | EnsemblPlantsGene:GSBRNA2T00137660001 | InterPro:GroEL-like_apical_dom_sf | InterPro:IPR027409 | InterPro:IPR027410 | InterPro:IPR027413 |
HAMAP:MF_00600 | PFAM:PF00118 | PRINTS:PR00298 | ScanProsite:PS00296 | PANTHER:PTHR11353 | PANTHER:PTHR11353:SF85 |
SUPFAM:SSF48592 | SUPFAM:SSF52029 | SUPFAM:SSF54849 | InterPro:TCP-1-like_intermed_sf | TIGRFAMs:TIGR02348 | UniParc:UPI0004EE1A5F |
SEG:seg | : | : | : | : | : |
Description
BnaA03g33070D
Coordinates
chrLK031828:+:1658845..1662345
Molecular Weight (calculated)
60510.0 Da
IEP (calculated)
5.685
GRAVY (calculated)
-0.055
Length
572 amino acids
Sequence
(BLAST)
(BLAST)
001: MYRVLSKLSS SIGSSTSRKL VSGRIISSRN YVAKDISFGV GARAAMLQGV SEVAEAVKVT MGPKGRNVII ESSYGAPKIT KDGVTVAKSI SFESNAKNMG
101: AELVKQVANA TNKVAGDGTT CATVLTQAIL TEGCKSVAAG VNVMDLRSGI NMAIDAVVSD LKSRAVMIST PEEITQVATI SANGEREIGE LIARAMEKVG
201: KEGVITVADG NTLENELEVV EGMKLARGYI SPYFITDEKT QKCELENPII LIHEKKVSDM NSLLKVLEAA VKSSRPLLVV AEDVESDALA MLILNKHHAG
301: LKVCAIKAPG FGDNRKASLD DLAVLTGAEV ISEERGLTLD KIRPELLGTA KKVTISRDDT LILHGGGDKK LIEERCEELR SANEKSTSTF DKEKTQERLS
401: KLSGGVAVFK VGGASEAEVG ERKDRVTDAL NATRAAVEEG IVPGGGVALL YATKALDNLE TQNEDQRRGV QIVQNALKAP ALTIAANAGY DGSLVVGKLL
501: EQDDCNFGFD ASKGSYVDMV KAGIIDPVKV IKTALTDAAS VSLLLTTTEA SVLVKAEEKT QKHVPDMAGM GM
101: AELVKQVANA TNKVAGDGTT CATVLTQAIL TEGCKSVAAG VNVMDLRSGI NMAIDAVVSD LKSRAVMIST PEEITQVATI SANGEREIGE LIARAMEKVG
201: KEGVITVADG NTLENELEVV EGMKLARGYI SPYFITDEKT QKCELENPII LIHEKKVSDM NSLLKVLEAA VKSSRPLLVV AEDVESDALA MLILNKHHAG
301: LKVCAIKAPG FGDNRKASLD DLAVLTGAEV ISEERGLTLD KIRPELLGTA KKVTISRDDT LILHGGGDKK LIEERCEELR SANEKSTSTF DKEKTQERLS
401: KLSGGVAVFK VGGASEAEVG ERKDRVTDAL NATRAAVEEG IVPGGGVALL YATKALDNLE TQNEDQRRGV QIVQNALKAP ALTIAANAGY DGSLVVGKLL
501: EQDDCNFGFD ASKGSYVDMV KAGIIDPVKV IKTALTDAAS VSLLLTTTEA SVLVKAEEKT QKHVPDMAGM GM
001: MYRVLSKLSS SIGSSTSRKL VSGRIISSRN YAAKDISFGI GARAAMLQGV SEVAEAVKVT MGPKGRNVII ESSYGGPKIT KDGVTVAKSI SFQAKAKNIG
101: AELVKQVASA TNKVAGDGTT CATVLTQAIL IEGCKSVAAG VNVMDLRVGI NMAIAAVVSD LKSRAVMIST PEEITQVATI SANGEREIGE LIARAMEKVG
201: KEGVITVADG NTLDNELEVV EGMKLARGYI SPYFITDEKT QKCELENPII LIHEKKISDI NSLLKVLEAA VKSSRPLLIV AEDVESDALA MLILNKHHGG
301: LKVCAIKAPG FGDNRKASLD DLAVLTGAEV ISEERGLSLE KIRPELLGTA KKVTVTRDDT IILHGGGDKK LIEERCEELR SANEKSTSTF DQEKTQERLS
401: KLSGGVAVFK VGGASESEVG ERKDRVTDAL NATRAAVEEG IIPGGGVALL YATKALDNLQ TENEDQRRGV QIVQNALKAP AFTIAANAGY DGSLVVGKLL
501: EQDDCNFGFD AAKGKYVDMV KAGIIDPVKV IRTALTDAAS VSLLLTTTEA SVLVKADENT PNHVPDMASM GM
101: AELVKQVASA TNKVAGDGTT CATVLTQAIL IEGCKSVAAG VNVMDLRVGI NMAIAAVVSD LKSRAVMIST PEEITQVATI SANGEREIGE LIARAMEKVG
201: KEGVITVADG NTLDNELEVV EGMKLARGYI SPYFITDEKT QKCELENPII LIHEKKISDI NSLLKVLEAA VKSSRPLLIV AEDVESDALA MLILNKHHGG
301: LKVCAIKAPG FGDNRKASLD DLAVLTGAEV ISEERGLSLE KIRPELLGTA KKVTVTRDDT IILHGGGDKK LIEERCEELR SANEKSTSTF DQEKTQERLS
401: KLSGGVAVFK VGGASESEVG ERKDRVTDAL NATRAAVEEG IIPGGGVALL YATKALDNLQ TENEDQRRGV QIVQNALKAP AFTIAANAGY DGSLVVGKLL
501: EQDDCNFGFD AAKGKYVDMV KAGIIDPVKV IRTALTDAAS VSLLLTTTEA SVLVKADENT PNHVPDMASM GM
Arabidopsis Description
HSP60-3AChaperonin CPN60-like 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q93ZM7]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.