Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 7
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001524.1-P | Field mustard | mitochondrion | 94.06 | 94.06 |
| CDX75733 | Canola | mitochondrion | 94.06 | 94.06 |
| CDX82514 | Canola | mitochondrion | 93.88 | 93.88 |
| PGSC0003DMT400006642 | Potato | cytosol | 73.25 | 82.0 |
| Solyc03g121640.2.1 | Tomato | plastid | 79.37 | 79.23 |
| VIT_09s0002g02240.t01 | Wine grape | mitochondrion | 75.52 | 78.4 |
| KRH47114 | Soybean | mitochondrion | 78.5 | 78.22 |
| KRH44140 | Soybean | mitochondrion | 78.15 | 77.87 |
| GSMUA_Achr7P24090_001 | Banana | cytosol | 69.23 | 74.72 |
| AT3G23990.1 | Thale cress | mitochondrion | 70.8 | 70.19 |
| EES19881 | Sorghum | mitochondrion | 69.93 | 68.85 |
| Zm00001d038857_P001 | Maize | mitochondrion | 69.76 | 68.79 |
| Os05t0540300-01 | Rice | mitochondrion | 69.58 | 68.5 |
| TraesCS1D01G365800.1 | Wheat | mitochondrion | 69.06 | 68.34 |
| HORVU1Hr1G079910.1 | Barley | mitochondrion, plasma membrane | 69.23 | 68.16 |
| TraesCS1A01G361400.1 | Wheat | mitochondrion | 68.88 | 68.05 |
| TraesCS1B01G378000.1 | Wheat | mitochondrion | 69.06 | 67.75 |
| AT2G33210.1 | Thale cress | mitochondrion | 68.88 | 67.35 |
| AT3G13470.1 | Thale cress | plastid | 44.41 | 42.62 |
| AT5G56500.2 | Thale cress | plastid | 44.23 | 42.38 |
| AT1G55490.3 | Thale cress | plastid | 43.88 | 41.83 |
| AT2G28000.1 | Thale cress | plastid | 40.38 | 39.42 |
| AT1G26230.1 | Thale cress | plastid | 40.03 | 37.48 |
| AT5G18820.1 | Thale cress | plastid | 35.49 | 35.3 |
Protein Annotations
| Gene3D:1.10.560.10 | MapMan:19.1.7.1 | Gene3D:3.30.260.10 | Gene3D:3.50.7.10 | EntrezGene:820599 | ProteinID:AEE75427.1 |
| ArrayExpress:AT3G13860 | EnsemblPlantsGene:AT3G13860 | RefSeq:AT3G13860 | TAIR:AT3G13860 | RefSeq:AT3G13860-TAIR-G | EnsemblPlants:AT3G13860.1 |
| TAIR:AT3G13860.1 | EMBL:AY056782 | EMBL:AY094453 | Unigene:At.8222 | ProteinID:BAB02911.1 | EMBL:BT015923 |
| InterPro:Chaperonin_Cpn60_CS | InterPro:Chaprnin_Cpn60 | ncoils:Coil | InterPro:Cpn60/TCP-1 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005773 | GO:GO:0005774 | GO:GO:0005829 | GO:GO:0006457 |
| GO:GO:0006458 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016043 |
| GO:GO:0042026 | GO:GO:0044183 | GO:GO:0045041 | GO:GO:0046686 | GO:GO:0051082 | GO:GO:0061077 |
| InterPro:GROEL-like_equatorial_sf | InterPro:GroEL-like_apical_dom_sf | Symbol:HSP60-3A | InterPro:IPR027409 | InterPro:IPR027410 | InterPro:IPR027413 |
| HAMAP:MF_00600 | RefSeq:NP_566466.1 | PFAM:PF00118 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007057 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00298 |
| ScanProsite:PS00296 | PANTHER:PTHR11353 | PANTHER:PTHR11353:SF85 | UniProt:Q93ZM7 | SUPFAM:SSF48592 | SUPFAM:SSF52029 |
| SUPFAM:SSF54849 | InterPro:TCP-1-like_intermed_sf | TIGRFAMs:TIGR02348 | UniParc:UPI00000A5B41 | SEG:seg | : |
Description
HSP60-3AChaperonin CPN60-like 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q93ZM7]
Coordinates
chr3:-:4561517..4565335
Molecular Weight (calculated)
60470.0 Da
IEP (calculated)
5.894
GRAVY (calculated)
-0.023
Length
572 amino acids
Sequence
(BLAST)
(BLAST)
001: MYRVLSKLSS SIGSSTSRKL VSGRIISSRN YAAKDISFGI GARAAMLQGV SEVAEAVKVT MGPKGRNVII ESSYGGPKIT KDGVTVAKSI SFQAKAKNIG
101: AELVKQVASA TNKVAGDGTT CATVLTQAIL IEGCKSVAAG VNVMDLRVGI NMAIAAVVSD LKSRAVMIST PEEITQVATI SANGEREIGE LIARAMEKVG
201: KEGVITVADG NTLDNELEVV EGMKLARGYI SPYFITDEKT QKCELENPII LIHEKKISDI NSLLKVLEAA VKSSRPLLIV AEDVESDALA MLILNKHHGG
301: LKVCAIKAPG FGDNRKASLD DLAVLTGAEV ISEERGLSLE KIRPELLGTA KKVTVTRDDT IILHGGGDKK LIEERCEELR SANEKSTSTF DQEKTQERLS
401: KLSGGVAVFK VGGASESEVG ERKDRVTDAL NATRAAVEEG IIPGGGVALL YATKALDNLQ TENEDQRRGV QIVQNALKAP AFTIAANAGY DGSLVVGKLL
501: EQDDCNFGFD AAKGKYVDMV KAGIIDPVKV IRTALTDAAS VSLLLTTTEA SVLVKADENT PNHVPDMASM GM
101: AELVKQVASA TNKVAGDGTT CATVLTQAIL IEGCKSVAAG VNVMDLRVGI NMAIAAVVSD LKSRAVMIST PEEITQVATI SANGEREIGE LIARAMEKVG
201: KEGVITVADG NTLDNELEVV EGMKLARGYI SPYFITDEKT QKCELENPII LIHEKKISDI NSLLKVLEAA VKSSRPLLIV AEDVESDALA MLILNKHHGG
301: LKVCAIKAPG FGDNRKASLD DLAVLTGAEV ISEERGLSLE KIRPELLGTA KKVTVTRDDT IILHGGGDKK LIEERCEELR SANEKSTSTF DQEKTQERLS
401: KLSGGVAVFK VGGASESEVG ERKDRVTDAL NATRAAVEEG IIPGGGVALL YATKALDNLQ TENEDQRRGV QIVQNALKAP AFTIAANAGY DGSLVVGKLL
501: EQDDCNFGFD AAKGKYVDMV KAGIIDPVKV IRTALTDAAS VSLLLTTTEA SVLVKADENT PNHVPDMASM GM
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.