Factsheet for AT3G23990.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX94835	Canola	mitochondrion	95.84	95.84
Bra001934.1-P	Field mustard	mitochondrion	95.49	95.49
CDX93002	Canola	mitochondrion	90.99	95.45
CDY59050	Canola	cytosol	52.86	90.24
VIT_05s0051g00340.t01	Wine grape	mitochondrion	89.6	89.91
KRH33513	Soybean	mitochondrion	89.43	89.74
KRG90277	Soybean	mitochondrion	89.25	89.57
KRG92192	Soybean	mitochondrion	88.39	88.7
KRH34594	Soybean	mitochondrion	88.56	88.56
GSMUA_Achr10P...	Banana	mitochondrion	88.04	88.35
Os10t0462900-01	Rice	mitochondrion	87.52	87.98
GSMUA_Achr1P11160_001	Banana	mitochondrion	87.0	86.85
EER94121	Sorghum	mitochondrion	86.83	86.83
Zm00001d014090_P002	Maize	mitochondrion	86.48	86.48
Zm00001d032789_P001	Maize	plastid	85.96	86.11
TraesCS1B01G162300.1	Wheat	mitochondrion	85.62	86.06
TraesCS1A01G145000.1	Wheat	mitochondrion	85.62	86.06
TraesCS1D01G144000.1	Wheat	mitochondrion	85.44	85.89
AT2G33210.1	Thale cress	mitochondrion	87.0	85.81
Os03t0143400-01	Rice	mitochondrion	85.27	85.27
TraesCS4A01G409100.1	Wheat	mitochondrion	84.75	84.9
TraesCS4B01G307700.1	Wheat	mitochondrion	84.58	84.72
KXG40202	Sorghum	cytosol	58.23	82.56
CDY59049	Canola	mitochondrion	29.46	77.98
HORVU4Hr1G078820.3	Barley	plastid	84.92	77.65
TraesCS4D01G305900.1	Wheat	golgi	84.58	74.16
HORVU1Hr1G038680.8	Barley	mitochondrion	85.96	74.14
AT3G13860.1	Thale cress	mitochondrion	70.19	70.8
GSMUA_Achr10P...	Banana	cytosol	15.25	63.77
TraesCS4B01G266200.1	Wheat	cytosol	40.21	55.9
AT5G56500.2	Thale cress	plastid	46.45	44.89
AT3G13470.1	Thale cress	plastid	45.93	44.46
AT1G55490.3	Thale cress	plastid	45.58	43.83
AT2G28000.1	Thale cress	plastid	42.11	41.47
AT1G26230.1	Thale cress	plastid	41.59	39.28
AT5G18820.1	Thale cress	plastid	37.78	37.91
HORVU4Hr1G071510.2	Barley	cytosol	42.81	34.69

Protein Annotations

Gene3D:1.10.560.10	MapMan:19.1.7.1	Gene3D:3.30.260.10	Gene3D:3.50.7.10	EntrezGene:821983	UniProt:A0A178VEN0
ProteinID:AEE76842.1	ArrayExpress:AT3G23990	EnsemblPlantsGene:AT3G23990	RefSeq:AT3G23990	TAIR:AT3G23990	RefSeq:AT3G23990-TAIR-G
EnsemblPlants:AT3G23990.1	TAIR:AT3G23990.1	EMBL:AY099594	Unigene:At.25152	ProteinID:BAB03017.1	EMBL:BT010398
InterPro:Chaperonin_Cpn60_CS	InterPro:Chaprnin_Cpn60	InterPro:Cpn60/TCP-1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003735
GO:GO:0005198	GO:GO:0005488	GO:GO:0005507	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005759	GO:GO:0005773
GO:GO:0005774	GO:GO:0005829	GO:GO:0005840	GO:GO:0006457	GO:GO:0006458	GO:GO:0006810
GO:GO:0006950	GO:GO:0007005	GO:GO:0008150	GO:GO:0009408	GO:GO:0009628	GO:GO:0009987
GO:GO:0016020	GO:GO:0016043	GO:GO:0022626	GO:GO:0042026	GO:GO:0042788	GO:GO:0044183
GO:GO:0045041	GO:GO:0046686	GO:GO:0051082	GO:GO:0061077	InterPro:GROEL-like_equatorial_sf	InterPro:GroEL-like_apical_dom_sf
Symbol:HSP60	InterPro:IPR027409	InterPro:IPR027410	InterPro:IPR027413	HAMAP:MF_00600	RefSeq:NP_189041.1
ProteinID:OAP03825.1	UniProt:P29197	PFAM:PF00118	PO:PO:0000005	PO:PO:0000013	PO:PO:0000037
PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001170
PO:PO:0001185	PO:PO:0004507	PO:PO:0007057	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098
PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007131	PO:PO:0007611	PO:PO:0007616
PO:PO:0008019	PO:PO:0009001	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010
PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046
PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137
PO:PO:0025022	PO:PO:0025281	PRINTS:PR00298	ScanProsite:PS00296	PANTHER:PTHR11353	PANTHER:PTHR11353:SF85
SUPFAM:SSF48592	SUPFAM:SSF52029	SUPFAM:SSF54849	InterPro:TCP-1-like_intermed_sf	TIGRFAMs:TIGR02348	UniParc:UPI00000011A6
EMBL:Z11547	SEG:seg	:	:	:	:

Description

CPN60Chaperonin CPN60, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P29197]

Coordinates

chr3:+:8668772..8672578

Molecular Weight (calculated)

61284.2 Da

IEP (calculated)

5.415

GRAVY (calculated)

-0.069

Length

577 amino acids

Sequence
(BLAST)

001: MYRFASNLAS KARIAQNARQ VSSRMSWSRN YAAKEIKFGV EARALMLKGV EDLADAVKVT MGPKGRNVVI EQSWGAPKVT KDGVTVAKSI EFKDKIKNVG
101: ASLVKQVANA TNDVAGDGTT CATVLTRAIF AEGCKSVAAG MNAMDLRRGI SMAVDAVVTN LKSKARMIST SEEIAQVGTI SANGEREIGE LIAKAMEKVG
201: KEGVITIQDG KTLFNELEVV EGMKLDRGYT SPYFITNQKT QKCELDDPLI LIHEKKISSI NSIVKVLELA LKRQRPLLIV SEDVESDALA TLILNKLRAG
301: IKVCAIKAPG FGENRKANLQ DLAALTGGEV ITDELGMNLE KVDLSMLGTC KKVTVSKDDT VILDGAGDKK GIEERCEQIR SAIELSTSDY DKEKLQERLA
401: KLSGGVAVLK IGGASEAEVG EKKDRVTDAL NATKAAVEEG ILPGGGVALL YAARELEKLP TANFDQKIGV QIIQNALKTP VYTIASNAGV EGAVIVGKLL
501: EQDNPDLGYD AAKGEYVDMV KAGIIDPLKV IRTALVDAAS VSSLLTTTEA VVVDLPKDES ESGAAGAGMG GMGGMDY

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.