Skip to main content
crop-pal logo
Wine grape
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH33513 Soybean mitochondrion 91.83 91.83
KRG92192 Soybean mitochondrion 91.65 91.65
KRH34594 Soybean mitochondrion 91.3 90.99
KRG90277 Soybean mitochondrion 90.96 90.96
GSMUA_Achr10P... Banana mitochondrion 90.78 90.78
Os10t0462900-01 Rice mitochondrion 89.91 90.07
GSMUA_Achr1P11160_001 Banana mitochondrion 90.09 89.62
AT3G23990.1 Thale cress mitochondrion 89.91 89.6
Zm00001d014090_P002 Maize mitochondrion 89.74 89.43
CDX94835 Canola mitochondrion 89.74 89.43
Bra001934.1-P Field mustard mitochondrion 89.57 89.25
TraesCS1B01G162300.1 Wheat mitochondrion 89.04 89.2
TraesCS1A01G145000.1 Wheat mitochondrion 89.04 89.2
CDX93002 Canola mitochondrion 85.22 89.09
TraesCS1D01G144000.1 Wheat mitochondrion 88.87 89.02
Solyc05g053470.2.1 Tomato plastid 88.52 88.83
PGSC0003DMT400069855 Potato mitochondrion 88.52 88.83
EER94121 Sorghum mitochondrion 89.04 88.73
Zm00001d032789_P001 Maize plastid 88.87 88.72
PGSC0003DMT400030265 Potato mitochondrion 88.52 88.52
Solyc09g091180.2.1 Tomato extracellular, mitochondrion, nucleus, unclear 88.35 87.74
Os03t0143400-01 Rice mitochondrion 87.48 87.17
TraesCS4A01G409100.1 Wheat mitochondrion 86.96 86.81
TraesCS4B01G307700.1 Wheat mitochondrion 86.78 86.63
CDY59050 Canola cytosol 49.57 84.32
KXG40202 Sorghum cytosol 59.3 83.78
HORVU4Hr1G078820.3 Barley plastid 86.96 79.24
HORVU1Hr1G038680.8 Barley mitochondrion 89.39 76.83
CDY59049 Canola mitochondrion 28.87 76.15
TraesCS4D01G305900.1 Wheat golgi 86.78 75.84
VIT_09s0002g02240.t01 Wine grape mitochondrion 69.22 72.23
GSMUA_Achr10P... Banana cytosol 15.83 65.94
TraesCS4B01G266200.1 Wheat cytosol 39.83 55.18
VIT_09s0002g03930.t01 Wine grape plastid 48.7 45.98
VIT_06s0004g00240.t01 Wine grape plastid 48.35 45.72
VIT_06s0061g00270.t01 Wine grape plastid 44.7 43.86
VIT_01s0011g01680.t01 Wine grape plastid 41.57 40.99
VIT_01s0010g00920.t01 Wine grape mitochondrion 42.43 40.0
HORVU4Hr1G071510.2 Barley cytosol 42.96 34.69
Protein Annotations
Gene3D:1.10.560.10EntrezGene:100244356wikigene:100244356MapMan:19.1.7.1Gene3D:3.30.260.10Gene3D:3.50.7.10
ProteinID:CBI33329ProteinID:CBI33329.3InterPro:Chaperonin_Cpn60_CSInterPro:Chaprnin_Cpn60InterPro:Cpn60/TCP-1UniProt:D7TS57
EMBL:FN596241GO:GO:0000166GO:GO:0003674GO:GO:0003735GO:GO:0005198GO:GO:0005488
GO:GO:0005507GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005739GO:GO:0005759GO:GO:0005773GO:GO:0005774GO:GO:0005829
GO:GO:0005840GO:GO:0006457GO:GO:0006458GO:GO:0006810GO:GO:0006950GO:GO:0008150
GO:GO:0009408GO:GO:0009628GO:GO:0009987GO:GO:0016020GO:GO:0016043GO:GO:0022626
GO:GO:0042026GO:GO:0042788GO:GO:0044183GO:GO:0045041GO:GO:0046686GO:GO:0051082
GO:GO:0061077InterPro:GROEL-like_equatorial_sfInterPro:GroEL-like_apical_dom_sfInterPro:IPR027409InterPro:IPR027410InterPro:IPR027413
EntrezGene:LOC100244356wikigene:LOC100244356HAMAP:MF_00600PFAM:PF00118PRINTS:PR00298ScanProsite:PS00296
PANTHER:PTHR11353PANTHER:PTHR11353:SF85SUPFAM:SSF48592SUPFAM:SSF52029SUPFAM:SSF54849TIGR:TC69987
InterPro:TCP-1-like_intermed_sfTIGRFAMs:TIGR02348UniParc:UPI00019833F4ArrayExpress:VIT_05s0051g00340EnsemblPlantsGene:VIT_05s0051g00340EnsemblPlants:VIT_05s0051g00340.t01
unigene:Vvi.6106RefSeq:XP_002285608RefSeq:XP_002285608.1RefSeq:XP_003632036RefSeq:XP_003632036.1:
Description
No Description!
Coordinates
chr5:+:10895023..10900859
Molecular Weight (calculated)
61373.4 Da
IEP (calculated)
5.756
GRAVY (calculated)
-0.064
Length
575 amino acids
Sequence
(BLAST)
001: MYRFATSLAS KARIARNSTH QIGSRLNWSR NYAAKDIRFG VEARALMLKG VEELADAVRV TMGPKGRNVV LEQSFGAPKV TKDGVTVAKS IEFKDRIKNV
101: GASLVKQVAN ATNDVAGDGT TCATVLTRAI FTEGCKSVAA GMNAMDLRRG ISMAVDAVVT NLKSRAKMIS TSEEIAQVGT ISANGEREIG ELIAKAMEKV
201: GKEGVITISD GKTLYNELEV VEGMKLDRGY ISPYFITNQK TQKCELENPL VLIHEKKISN IHAVVKVLEM ALKTQRPLLI VAEDVESEAL ATLILNKLRA
301: GIKVCAIKAP GFGENRKAAL QDLATLTGGE LITEELGLNL EKAELDMLGT CKKVTISKDD TVILDGAGDK KAIEERCEQI RSAIELSTSD YDKEKLQERL
401: AKLSGGVAVL KIGGASEAEV SEKKDRVTDA LNATKAAVEE GIVPGGGVAL LYASKELDKL PTSNFDQKIG VQIIQNALKT PVFTIASNAG VEGAVVVGKL
501: LEQDNPDLGY DAAKGEYVDM VKAGIIDPLK VIRTALVDAA SVSSLMTTTE AVVVELPKDE KEVPAMGGGM GGMDY
Best Arabidopsis Sequence Match ( AT3G23990.1 )
(BLAST)
001: MYRFASNLAS KARIAQNARQ VSSRMSWSRN YAAKEIKFGV EARALMLKGV EDLADAVKVT MGPKGRNVVI EQSWGAPKVT KDGVTVAKSI EFKDKIKNVG
101: ASLVKQVANA TNDVAGDGTT CATVLTRAIF AEGCKSVAAG MNAMDLRRGI SMAVDAVVTN LKSKARMIST SEEIAQVGTI SANGEREIGE LIAKAMEKVG
201: KEGVITIQDG KTLFNELEVV EGMKLDRGYT SPYFITNQKT QKCELDDPLI LIHEKKISSI NSIVKVLELA LKRQRPLLIV SEDVESDALA TLILNKLRAG
301: IKVCAIKAPG FGENRKANLQ DLAALTGGEV ITDELGMNLE KVDLSMLGTC KKVTVSKDDT VILDGAGDKK GIEERCEQIR SAIELSTSDY DKEKLQERLA
401: KLSGGVAVLK IGGASEAEVG EKKDRVTDAL NATKAAVEEG ILPGGGVALL YAARELEKLP TANFDQKIGV QIIQNALKTP VYTIASNAGV EGAVIVGKLL
501: EQDNPDLGYD AAKGEYVDMV KAGIIDPLKV IRTALVDAAS VSSLLTTTEA VVVDLPKDES ESGAAGAGMG GMGGMDY
Arabidopsis Description
CPN60Chaperonin CPN60, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P29197]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.