Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY20555 | Canola | plastid | 91.0 | 91.6 |
| Bra012462.1-P | Field mustard | plastid | 90.34 | 90.94 |
| CDY66193 | Canola | plastid | 90.02 | 90.61 |
| VIT_01s0010g00920.t01 | Wine grape | mitochondrion | 72.5 | 72.62 |
| Solyc05g010240.2.1 | Tomato | plastid | 63.18 | 71.35 |
| PGSC0003DMT400064673 | Potato | cytosol | 52.21 | 70.73 |
| Os04t0443900-01 | Rice | plastid | 65.3 | 67.86 |
| KRH75202 | Soybean | plastid | 66.28 | 66.94 |
| GSMUA_Achr9P18480_001 | Banana | plastid | 64.65 | 66.84 |
| KRH71056 | Soybean | plastid | 66.12 | 66.78 |
| Zm00001d028409_P001 | Maize | plastid | 63.34 | 65.82 |
| TraesCS2D01G310000.3 | Wheat | plastid | 62.68 | 65.36 |
| TraesCS2B01G328500.3 | Wheat | plastid | 62.68 | 64.7 |
| HORVU2Hr1G077410.18 | Barley | plastid | 61.87 | 63.64 |
| AT5G56500.2 | Thale cress | plastid | 60.72 | 62.14 |
| AT3G13470.1 | Thale cress | plastid | 60.39 | 61.91 |
| AT1G55490.3 | Thale cress | plastid | 60.72 | 61.83 |
| TraesCS2A01G311700.1 | Wheat | plastid | 62.52 | 58.95 |
| AT2G28000.1 | Thale cress | plastid | 40.1 | 41.81 |
| AT3G23990.1 | Thale cress | mitochondrion | 39.28 | 41.59 |
| AT2G33210.1 | Thale cress | mitochondrion | 38.63 | 40.34 |
| AT3G13860.1 | Thale cress | mitochondrion | 37.48 | 40.03 |
| AT5G18820.1 | Thale cress | plastid | 35.35 | 37.57 |
Protein Annotations
| MapMan:1.1.8.1.6.2.2 | Gene3D:1.10.560.10 | MapMan:1.2.1.2.1.2 | MapMan:19.1.7.1 | Gene3D:3.30.260.10 | Gene3D:3.50.7.10 |
| EntrezGene:839164 | UniProt:A0A178WH16 | ProteinID:AAG50688.1 | ProteinID:AEE30663.1 | EMBL:AK221637 | ProteinID:ANM59892.1 |
| ProteinID:ANM59894.1 | ArrayExpress:AT1G26230 | EnsemblPlantsGene:AT1G26230 | RefSeq:AT1G26230 | TAIR:AT1G26230 | RefSeq:AT1G26230-TAIR-G |
| EnsemblPlants:AT1G26230.1 | TAIR:AT1G26230.1 | InterPro:Chaprnin_Cpn60 | ncoils:Coil | InterPro:Cpn60/TCP-1 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006457 | GO:GO:0006458 | GO:GO:0008150 |
| GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009570 | GO:GO:0009941 | GO:GO:0009987 | GO:GO:0042026 |
| GO:GO:0044183 | GO:GO:0051082 | GO:GO:0061077 | InterPro:GROEL-like_equatorial_sf | InterPro:GroEL-like_apical_dom_sf | InterPro:IPR027409 |
| InterPro:IPR027410 | InterPro:IPR027413 | RefSeq:NP_001185097.1 | RefSeq:NP_001322215.1 | RefSeq:NP_173947.1 | ProteinID:OAP17630.1 |
| PFAM:PF00118 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PRINTS:PR00298 | PANTHER:PTHR11353 | PANTHER:PTHR11353:SF81 | UniProt:Q9C667 | SUPFAM:SSF48592 |
| SUPFAM:SSF52029 | SUPFAM:SSF54849 | InterPro:TCP-1-like_intermed_sf | TIGRFAMs:TIGR02348 | UniParc:UPI000009C7D4 | SEG:seg |
Description
CPN60B4Cpn60beta4 [Source:UniProtKB/TrEMBL;Acc:A0A178WH16]
Coordinates
chr1:-:9072256..9075350
Molecular Weight (calculated)
66800.2 Da
IEP (calculated)
9.754
GRAVY (calculated)
-0.187
Length
611 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFSQAALSA LPLSDRTFRK KPSSSSSSSP NFVLRVRAAA KEVHFNRDGS VTKKLQAGAD MVAKLLGVTL GPKGRNVVLQ NKYGPPRIVN DGETVLKEIE
101: LEDPLENVGV KLVRQAGAKT NDLAGDGSTT SIILAHGLIT EGIKVISAGT NPIQVARGIE KTTKALVLEL KSMSREIEDH ELAHVAAVSA GNDYEVGNMI
201: SNAFQQVGRT GVVTIEKGKY LVNNLEIVEG MQFNRGYLSP YFVTDRRKRE AEFHDCKLLL VDKKITNPKD MFKILDSAVK EEFPVLIVAE DIEQDALAPV
301: IRNKLKGNLK VAAIKAPAFG ERKSHCLDDL AIFTGATVIR DEMGLSLEKA GKEVLGTAKR VLVTKDSTLI VTNGFTQKAV DERVSQIKNL IENTEENFQK
401: KILNERVARL SGGIAIIQVG ALTQVELKDK QLKVEDALNA TKSAIEEGIV VGGGCALLRL ATKVDRIKET LDNTEQKIGA EIFKKALSYP IRLIAKNADT
501: NGNIVIEKVL SNKNTMYGYN AAKNQYEDLM LAGIIDPTKV VRCCLEHASS VAQTFLTSDC VVVEIKEIKP RPIINPPLPT SSPATSSMFP DRKLPRFPQI
601: MPRTRSHFPR K
101: LEDPLENVGV KLVRQAGAKT NDLAGDGSTT SIILAHGLIT EGIKVISAGT NPIQVARGIE KTTKALVLEL KSMSREIEDH ELAHVAAVSA GNDYEVGNMI
201: SNAFQQVGRT GVVTIEKGKY LVNNLEIVEG MQFNRGYLSP YFVTDRRKRE AEFHDCKLLL VDKKITNPKD MFKILDSAVK EEFPVLIVAE DIEQDALAPV
301: IRNKLKGNLK VAAIKAPAFG ERKSHCLDDL AIFTGATVIR DEMGLSLEKA GKEVLGTAKR VLVTKDSTLI VTNGFTQKAV DERVSQIKNL IENTEENFQK
401: KILNERVARL SGGIAIIQVG ALTQVELKDK QLKVEDALNA TKSAIEEGIV VGGGCALLRL ATKVDRIKET LDNTEQKIGA EIFKKALSYP IRLIAKNADT
501: NGNIVIEKVL SNKNTMYGYN AAKNQYEDLM LAGIIDPTKV VRCCLEHASS VAQTFLTSDC VVVEIKEIKP RPIINPPLPT SSPATSSMFP DRKLPRFPQI
601: MPRTRSHFPR K
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.