Factsheet for HORVU2Hr1G077410.18

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G328500.3	Wheat	plastid	97.31	97.64
TraesCS2D01G310000.3	Wheat	plastid	95.96	97.27
TraesCS2A01G311700.1	Wheat	plastid	95.96	87.96
Os04t0443900-01	Rice	plastid	83.0	83.84
Zm00001d028409_P001	Maize	plastid	80.81	81.63
GSMUA_Achr9P18480_001	Banana	plastid	69.87	70.22
Solyc05g010240.2.1	Tomato	plastid	59.93	65.8
PGSC0003DMT400064673	Potato	cytosol	49.49	65.19
VIT_01s0010g00920.t01	Wine grape	mitochondrion	66.5	64.75
KRH75202	Soybean	plastid	64.81	63.64
KRH71056	Soybean	plastid	64.31	63.14
CDY20555	Canola	plastid	63.47	62.11
Bra012462.1-P	Field mustard	plastid	63.3	61.94
CDY66193	Canola	plastid	63.3	61.94
AT1G26230.1	Thale cress	plastid	63.64	61.87
HORVU7Hr1G006490.2	Barley	cytosol	57.07	61.19
HORVU4Hr1G076680.1	Barley	cytosol	20.03	60.1
HORVU2Hr1G107410.2	Barley	cytosol	19.87	59.0
HORVU5Hr1G074160.1	Barley	cytosol	19.19	58.46
HORVU6Hr1G005220.3	Barley	plastid	56.23	55.85
HORVU6Hr1G000180.2	Barley	plastid	54.55	49.77
HORVU4Hr1G066820.2	Barley	cytosol	19.02	48.09
HORVU5Hr1G125130.1	Barley	plastid	41.08	41.57
HORVU2Hr1G109400.1	Barley	cytosol	6.06	39.13
HORVU2Hr1G011340.1	Barley	cytosol	10.44	37.58
HORVU2Hr1G007840.7	Barley	mitochondrion, plastid	39.23	37.34
HORVU1Hr1G079910.1	Barley	mitochondrion, plasma membrane	36.2	37.01
HORVU4Hr1G078820.3	Barley	plastid	38.05	35.82
HORVU0Hr1G038830.17	Barley	plastid	35.35	35.59
HORVU1Hr1G038680.8	Barley	mitochondrion	38.89	34.53
HORVU4Hr1G071510.2	Barley	cytosol	26.43	22.05

Protein Annotations

MapMan:1.1.8.1.6.2.2	Gene3D:1.10.560.10	MapMan:1.2.1.2.1.2	MapMan:19.1.7.1	Gene3D:3.30.260.10	Gene3D:3.50.7.10
UniProt:A0A287IJ48	InterPro:Chaperonin_Cpn60_CS	InterPro:Chaprnin_Cpn60	ncoils:Coil	InterPro:Cpn60/TCP-1	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006457	GO:GO:0008150	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570
GO:GO:0009941	GO:GO:0009987	GO:GO:0042026	InterPro:GROEL-like_equatorial_sf	InterPro:GroEL-like_apical_dom_sf	EnsemblPlantsGene:HORVU2Hr1G077410
EnsemblPlants:HORVU2Hr1G077410.18	InterPro:IPR027409	InterPro:IPR027410	InterPro:IPR027413	PFAM:PF00118	PRINTS:PR00298
ScanProsite:PS00296	PANTHER:PTHR11353	PANTHER:PTHR11353:SF81	SUPFAM:SSF48592	SUPFAM:SSF52029	SUPFAM:SSF54849
InterPro:TCP-1-like_intermed_sf	TIGRFAMs:TIGR02348	UniParc:UPI000B46C84A	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr2H:+:559653003..559662402

Molecular Weight (calculated)

63860.8 Da

IEP (calculated)

7.440

GRAVY (calculated)

-0.030

Length

594 amino acids

Sequence
(BLAST)

001: AQRSSMSRMP LPPSPPPSLS SKAPTLPFSP KKTPPMPVYK DLHFNKDLSA TKKLQAGVDL VARLVGVTLG PKGRNVVLAN KYGPPKIVND GETVLKEIEL
101: EDPLENLGVK LVRQAGARTN DIAGDGCTTS IILAQGLIAE GMKVLAAGMN PVQIARGIGR TADALVSELK LMSREIEDHE IAHVAAVSAG NDYAVGNMIS
201: DAFKRVGREG MVRIENGRST VNSLEVVEGM QFERGYLSPF FVTNHANMSA EYTDCKILLV DKIISDPREL LKVCFSAVKE DFPLLIIAED VEEEALATLT
301: RNKLSGMIKV AAIKAPSFGE QKTQCLEDIA IITGGTVVSD DMGYTLAEAG KEFLGSASKV VVKKDSTLIV TDGSTLHAVE KRVAQIKGQV ENSKERYQKK
401: ILGERIARLS GAIAIIQIGA QTVIEMKDKK LRIEDALNAT MAAIEEGVVV GGGCSLLRLS QKIEMIKESL DNLEQKIGAD IFKHALTYPT TLIANNAGMS
501: GKFVIEKVLS NDNASYGYNA ANGCYEDLMA SGILDPTKVV RCCIEHSAVV AKSFLTSDVV IVEAQESKPV RVRPPMPPRN LIPPMPASVS GIRV

Best Arabidopsis Sequence Match ( AT1G26230.1 )
(BLAST)

001: MAFSQAALSA LPLSDRTFRK KPSSSSSSSP NFVLRVRAAA KEVHFNRDGS VTKKLQAGAD MVAKLLGVTL GPKGRNVVLQ NKYGPPRIVN DGETVLKEIE
101: LEDPLENVGV KLVRQAGAKT NDLAGDGSTT SIILAHGLIT EGIKVISAGT NPIQVARGIE KTTKALVLEL KSMSREIEDH ELAHVAAVSA GNDYEVGNMI
201: SNAFQQVGRT GVVTIEKGKY LVNNLEIVEG MQFNRGYLSP YFVTDRRKRE AEFHDCKLLL VDKKITNPKD MFKILDSAVK EEFPVLIVAE DIEQDALAPV
301: IRNKLKGNLK VAAIKAPAFG ERKSHCLDDL AIFTGATVIR DEMGLSLEKA GKEVLGTAKR VLVTKDSTLI VTNGFTQKAV DERVSQIKNL IENTEENFQK
401: KILNERVARL SGGIAIIQVG ALTQVELKDK QLKVEDALNA TKSAIEEGIV VGGGCALLRL ATKVDRIKET LDNTEQKIGA EIFKKALSYP IRLIAKNADT
501: NGNIVIEKVL SNKNTMYGYN AAKNQYEDLM LAGIIDPTKV VRCCLEHASS VAQTFLTSDC VVVEIKEIKP RPIINPPLPT SSPATSSMFP DRKLPRFPQI
601: MPRTRSHFPR K

Arabidopsis Description

CPN60B4Cpn60beta4 [Source:UniProtKB/TrEMBL;Acc:A0A178WH16]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.