CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY68896	Canola	cytosol	57.9	100.0
CDY31190	Canola	plastid	99.48	98.81
Bra000498.1-P	Field mustard	mitochondrion	90.38	98.32
CDY30514	Canola	plastid	98.11	97.61
CDY04527	Canola	plastid	97.25	94.97
AT2G28000.1	Thale cress	plastid	93.81	93.17
CDX77147	Canola	plastid	98.45	92.12
CDX71396	Canola	plastid	82.82	91.12
KRH25068	Soybean	nucleus	86.94	86.64
Solyc11g069790.1.1	Tomato	plastid	84.88	84.01
VIT_06s0061g00270.t01	Wine grape	plastid	84.54	83.96
PGSC0003DMT400002933	Potato	cytosol, extracellular, plastid	84.02	83.16
GSMUA_Achr11P...	Banana	plastid	82.82	82.25
Os12t0277500-01	Rice	plastid	81.62	82.18
GSMUA_AchrUn_...	Banana	plastid	81.44	82.15
Os03t0859600-01	Rice	plastid	43.99	82.05
EES19317	Sorghum	plastid	81.27	81.98
CDY31193	Canola	plastid	33.16	81.43
Zm00001d000399_P001	Maize	plastid	81.44	81.16
TraesCS2D01G049500.1	Wheat	golgi, plastid	80.41	80.97
TraesCSU01G009200.1	Wheat	mitochondrion, plastid	80.41	80.97
EER90466	Sorghum	plastid	79.55	79.83
KRH30612	Soybean	endoplasmic reticulum	81.1	79.6
TraesCS4A01G315500.2	Wheat	plastid	79.38	78.84
TraesCS5D01G550700.1	Wheat	plastid	79.55	78.74
HORVU5Hr1G125130.1	Barley	plastid	79.38	78.71
TraesCS5B01G563900.2	Wheat	plastid	79.38	78.57
Zm00001d034919_P001	Maize	plastid	78.69	78.42
HORVU2Hr1G109400.1	Barley	cytosol	12.37	78.26
Solyc06g075010.2.1	Tomato	plastid	78.87	77.93
PGSC0003DMT400031301	Potato	plastid	78.69	77.76
HORVU2Hr1G011340.1	Barley	cytosol	21.99	77.58
HORVU2Hr1G007840.7	Barley	mitochondrion, plastid	80.58	75.16
Os03t0859700-00	Rice	extracellular, plastid	22.34	70.27
Zm00001d051252_P001	Maize	cytosol	22.85	64.88
CDY47184	Canola	plastid	59.28	59.69
CDY02601	Canola	plastid	58.59	59.0
CDY11918	Canola	plastid	49.83	48.74
CDY32855	Canola	plastid	49.48	48.48
CDX75715	Canola	cytosol	46.39	47.96
CDY36809	Canola	plastid	49.66	47.61
CDX82537	Canola	plastid	47.94	47.53
CDY08245	Canola	plastid	48.97	47.5
CDX75713	Canola	plastid	48.28	47.39
CDY26100	Canola	plastid	48.97	45.38
CDX72433	Canola	endoplasmic reticulum	23.71	43.67
CDX94835	Canola	mitochondrion	41.92	42.29
CDY20555	Canola	plastid	43.99	42.17
CDY66193	Canola	plastid	43.81	42.01
CDX93002	Canola	mitochondrion	39.52	41.82
CDY59050	Canola	cytosol	24.23	41.72
CDY19471	Canola	mitochondrion	42.27	41.48
CDX79518	Canola	cytosol	14.26	41.09
CDY02438	Canola	cytosol	48.63	40.6
CDY17152	Canola	mitochondrion	40.03	40.59
CDY23605	Canola	cytosol	30.24	40.55
CDX84697	Canola	mitochondrion	39.18	40.5
CDY72107	Canola	mitochondrion	21.31	40.39
CDX82514	Canola	mitochondrion	39.35	40.03
CDX75733	Canola	mitochondrion	39.18	39.86
CDY56074	Canola	plastid	30.07	36.84
CDY59049	Canola	mitochondrion	13.23	35.32
CDY43988	Canola	cytosol	31.1	35.21
CDY10557	Canola	endoplasmic reticulum, plastid	48.45	34.02
CDY66712	Canola	mitochondrion	34.71	33.5
CDY40825	Canola	endoplasmic reticulum, vacuole	12.2	33.33
CDY32775	Canola	cytosol	4.81	32.94
CDY37741	Canola	mitochondrion	32.47	30.93
CDY10302	Canola	extracellular	3.09	27.69
CDX86994	Canola	mitochondrion, plastid	32.13	26.64
CDY56079	Canola	plastid	4.81	20.9
CDX85007	Canola	cytosol, plastid	27.49	15.94

Protein Annotations

MapMan:1.1.8.1.6.2.1	Gene3D:1.10.560.10	MapMan:1.2.1.2.1.1	MapMan:19.1.7.1	Gene3D:3.30.260.10	Gene3D:3.50.7.10
GO:A0A078D2C8	EnsemblPlants:CDX83280	ProteinID:CDX83280	ProteinID:CDX83280.1	InterPro:Chaperonin_Cpn60_CS	InterPro:Chaprnin_Cpn60
ncoils:Coil	InterPro:Cpn60/TCP-1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006457	GO:GO:0008150
GO:GO:0009987	GO:GO:0042026	InterPro:GROEL-like_equatorial_sf	EnsemblPlantsGene:GSBRNA2T00138831001	InterPro:GroEL-like_apical_dom_sf	InterPro:IPR027409
InterPro:IPR027410	InterPro:IPR027413	HAMAP:MF_00600	PFAM:PF00118	PRINTS:PR00298	ScanProsite:PS00296
PANTHER:PTHR11353	PANTHER:PTHR11353:SF175	SUPFAM:SSF48592	SUPFAM:SSF52029	SUPFAM:SSF54849	InterPro:TCP-1-like_intermed_sf
TIGRFAMs:TIGR02348	UniParc:UPI0004EF393B	SEG:seg	:	:	:

Description

BnaA03g22260D

Coordinates

chrLK031832:+:791068..793680

Molecular Weight (calculated)

61496.0 Da

IEP (calculated)

4.736

GRAVY (calculated)

0.012

Length

582 amino acids

Sequence
(BLAST)

001: MASSNALSSA SVLCSSRQGK LSGGNQQKGQ RVSYRRRFSV RANVKEISFD QSSRAALQAG IDKLADAVGL TLGPRGRNVV LDEFGSPKVV NDGVTIARAI
101: ELPDAMENAG AALIREVASK TNDSAGDGTT TASVLAREII KHGLLSVTSG ANPVSLKRGI DKTVQALIEE LEKKARPVKG GSDIQAVATI SAGNDELVGT
201: MIADAIDKVG PDGVLSIESS SSFETTVEVE EGMEIDRGYI SPQFVTNPEK LLVEFENARV LITDQKITAI KDIIPILEKT TQLRAPLLII AEDVTGEALA
301: TLVVNKLRGV LNVVAVKAPG FGERRKAMLQ DIAILTGAEY QALDMGLLVE NTTIDQLGIA RKVTISKDST TLIADAASKD ELQARISQLK KELFETDSVY
401: DSEKLAERIA KLSGGVAVIK VGAATETELE DRKLRIEDAK NATFAAIEEG IVPGGGATLV HLSTVIPAIK EKLEDADERL GADIVQKALV APAALIAQNA
501: GIEGEVVVEK IMFSEWEIGY NAMTDTYENL LEAGVIDPAK VTRCALQNAA SVAGMVLTTQ AIVVDKPKPK APAAAPPQGL MV

Best Arabidopsis Sequence Match ( AT2G28000.1 )
(BLAST)

001: MASANALSSA SVLCSSRQSK LGGGNQQQGQ RVSYNKRTIR RFSVRANVKE IAFDQHSRAA LQAGIDKLAD CVGLTLGPRG RNVVLDEFGS PKVVNDGVTI
101: ARAIELPNAM ENAGAALIRE VASKTNDSAG DGTTTASILA REIIKHGLLS VTSGANPVSL KRGIDKTVQG LIEELQKKAR PVKGRDDIRA VASISAGNDD
201: LIGSMIADAI DKVGPDGVLS IESSSSFETT VEVEEGMEID RGYISPQFVT NPEKLLAEFE NARVLITDQK ITAIKDIIPI LEKTTQLRAP LLIIAEDVTG
301: EALATLVVNK LRGVLNVVAV KAPGFGERRK AMLQDIAILT GAEYLAMDMS LLVENATIDQ LGIARKVTIS KDSTTLIADA ASKDELQARI AQLKKELFET
401: DSVYDSEKLA ERIAKLSGGV AVIKVGAATE TELEDRKLRI EDAKNATFAA IEEGIVPGGG AALVHLSTVI PAIKETFEDA DERLGADIVQ KALLSPAALI
501: AQNAGVEGEV VVEKIMFSDW ENGYNAMTDT YENLFEAGVI DPAKVTRCAL QNAASVAGMV LTTQAIVVDK PKPKAPAAAA PEGLMV

Arabidopsis Description

CPN60A1SLP [Source:UniProtKB/TrEMBL;Acc:A0A178VZW6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.