Factsheet for Os03t0859700-00

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

extracellular: 26072143

msms PMID: 26072143 doi

B Du, Z Wei, Z Wang, X Wang, X Peng, B Du, R Chen, L Zhu, G He

State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, 430072, China., State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, 430072, China. Electronic address: gche@whu.edu.cn.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G550700.1	Wheat	plastid	85.95	27.04
HORVU5Hr1G125130.1	Barley	plastid	85.41	26.92
TraesCS4A01G315500.2	Wheat	plastid	84.86	26.79
EER90466	Sorghum	plastid	83.78	26.72
TraesCS5B01G563900.2	Wheat	plastid	84.86	26.7
Zm00001d034919_P001	Maize	plastid	82.16	26.03
Os12t0277500-01	Rice	plastid	77.3	24.74
GSMUA_AchrUn_...	Banana	plastid	76.22	24.44
GSMUA_Achr11P...	Banana	plastid	77.3	24.4
CDX71396	Canola	plastid	69.73	24.39
VIT_06s0061g00270.t01	Wine grape	plastid	75.14	23.72
KRH25068	Soybean	nucleus	74.05	23.46
KRH30612	Soybean	endoplasmic reticulum	74.05	23.1
Bra011985.1-P	Field mustard	plastid	71.89	22.73
CDY04527	Canola	plastid	72.43	22.48
Solyc11g069790.1.1	Tomato	plastid	71.35	22.45
PGSC0003DMT400002933	Potato	cytosol, extracellular, plastid	71.35	22.45
CDY30514	Canola	plastid	70.81	22.39
CDY31190	Canola	plastid	70.81	22.35
CDX83280	Canola	plastid	70.27	22.34
Bra034383.1-P	Field mustard	plastid	70.27	22.22
AT2G28000.1	Thale cress	plastid	68.65	21.67
Bra000498.1-P	Field mustard	mitochondrion	61.62	21.31
CDX77147	Canola	plastid	70.81	21.06
Solyc06g075010.2.1	Tomato	plastid	67.03	21.05
PGSC0003DMT400031301	Potato	plastid	65.41	20.54
Os09t0563300-02	Rice	plastid	51.89	16.44
Os02t0102900-01	Rice	plastid	45.95	14.21
Os06t0114000-02	Rice	plastid	45.41	13.98
Os10t0462900-01	Rice	mitochondrion	40.54	13.07
Os03t0143400-01	Rice	mitochondrion	38.92	12.48
Os05t0540300-01	Rice	mitochondrion	37.3	11.88
Os04t0443900-01	Rice	plastid	37.3	11.73
Os03t0859600-01	Rice	plastid	0.0	0.0
Os02t0103100-01	Rice	plasma membrane, vacuole	0.0	0.0
CDY68896	Canola	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.10.560.10	MapMan:35.1	ProteinID:BAH92453.1	ProteinID:BAS87477.1	UniProt:C7J056	InterPro:Chaperone_TCP-1
InterPro:Cpn60/TCP-1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005829
GO:GO:0006458	GO:GO:0007005	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	GO:GO:0044183
GO:GO:0051082	GO:GO:0061077	InterPro:GROEL-like_equatorial_sf	InterPro:IPR027413	EnsemblPlantsGene:Os03g0859700	EnsemblPlants:Os03t0859700-00
PFAM:PF00118	PRINTS:PR00304	PANTHER:PTHR11353	PANTHER:PTHR11353:SF179	SUPFAM:SSF48592	UniParc:UPI0000E122DD
SEG:seg	:	:	:	:	:

Description

chaperonin 60 alpha subunit 2Similar to RuBisCO subunit binding-protein alpha subunit, chloroplast precursor (60 kDa chaperonin alpha subunit) (CPN-60 alpha) (Fragment). (Os03t0859700-00)

Coordinates

chr3:-:36283803..36284798

Molecular Weight (calculated)

19208.1 Da

IEP (calculated)

10.763

GRAVY (calculated)

-0.080

Length

185 amino acids

Sequence
(BLAST)

001: MATMPSTCAS SSSLFLLLRR DRRSSRSASL PGPARRLGVV RASAKEIAFD QGSRSSLQAG VEKLAAAVAV TLGPRGRNVV LDEFGSPKVV NDGVTIARAI
101: ELADPMENAG AALIREVASK TNDSAGDGTT TASVLAREII KLGLLSVTSG ANPVSIKKGI DKTVHSLVEE LEKKSRPVKG SGDIK

Best Arabidopsis Sequence Match ( AT2G28000.1 )
(BLAST)

001: MASANALSSA SVLCSSRQSK LGGGNQQQGQ RVSYNKRTIR RFSVRANVKE IAFDQHSRAA LQAGIDKLAD CVGLTLGPRG RNVVLDEFGS PKVVNDGVTI
101: ARAIELPNAM ENAGAALIRE VASKTNDSAG DGTTTASILA REIIKHGLLS VTSGANPVSL KRGIDKTVQG LIEELQKKAR PVKGRDDIRA VASISAGNDD
201: LIGSMIADAI DKVGPDGVLS IESSSSFETT VEVEEGMEID RGYISPQFVT NPEKLLAEFE NARVLITDQK ITAIKDIIPI LEKTTQLRAP LLIIAEDVTG
301: EALATLVVNK LRGVLNVVAV KAPGFGERRK AMLQDIAILT GAEYLAMDMS LLVENATIDQ LGIARKVTIS KDSTTLIADA ASKDELQARI AQLKKELFET
401: DSVYDSEKLA ERIAKLSGGV AVIKVGAATE TELEDRKLRI EDAKNATFAA IEEGIVPGGG AALVHLSTVI PAIKETFEDA DERLGADIVQ KALLSPAALI
501: AQNAGVEGEV VVEKIMFSDW ENGYNAMTDT YENLFEAGVI DPAKVTRCAL QNAASVAGMV LTTQAIVVDK PKPKAPAAAA PEGLMV

Arabidopsis Description

CPN60A1SLP [Source:UniProtKB/TrEMBL;Acc:A0A178VZW6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.