Factsheet for TraesCS7D01G032800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G452700.2	Wheat	plastid	92.53	99.66
TraesCS7A01G036200.2	Wheat	golgi	96.82	98.23
EER89076	Sorghum	plastid	87.28	94.82
Zm00001d035937_P001	Maize	plastid	87.28	94.82
HORVU7Hr1G006490.2	Barley	cytosol	83.15	94.4
Os06t0114000-02	Rice	plastid	89.98	94.18
Zm00001d045544_P002	Maize	plastid	87.76	92.0
GSMUA_Achr9P23240_001	Banana	plastid	82.83	85.13
GSMUA_Achr3P27620_001	Banana	plastid	82.83	85.13
CDX75713	Canola	plastid	80.13	84.99
Bra001507.1-P	Field mustard	plastid	79.65	84.92
CDX75715	Canola	cytosol	75.99	84.9
CDX82537	Canola	plastid	79.17	84.84
PGSC0003DMT400061700	Potato	extracellular	80.76	84.81
Zm00001d016540_P001	Maize	cytosol	13.99	84.62
Solyc01g028810.2.1	Tomato	plastid	80.45	84.47
TraesCS6D01G009100.1	Wheat	golgi	80.29	84.45
VIT_06s0004g00240.t01	Wine grape	plastid	81.4	84.21
AT3G13470.1	Thale cress	plastid	79.65	84.06
AT1G55490.3	Thale cress	plastid	79.97	83.83
KRH43861	Soybean	plastid	78.86	83.78
KRH13605	Soybean	nucleus	78.38	83.42
VIT_09s0002g03930.t01	Wine grape	plastid	80.13	82.76
CDY08245	Canola	plastid	78.7	82.5
CDY32855	Canola	plastid	77.74	82.32
AT5G56500.2	Thale cress	plastid	78.06	82.24
Bra028922.1-P	Field mustard	plastid	76.95	81.9
Bra011919.1-P	Field mustard	plastid	79.01	81.74
CDY11918	Canola	plastid	76.79	81.18
Solyc03g120850.2.1	Tomato	plastid	77.42	80.5
PGSC0003DMT400006501	Potato	plastid	77.42	80.5
CDY36809	Canola	plastid	76.63	79.41
CDY26100	Canola	plastid	78.86	78.98
Zm00001d053279_P001	Maize	mitochondrion	19.71	78.98
TraesCS6D01G031400.1	Wheat	plastid	74.4	78.26
Zm00001d046709_P001	Maize	mitochondrion	19.4	77.71
CDY32775	Canola	cytosol	9.86	72.94
Bra030858.1-P	Field mustard	cytosol	79.81	72.86
Zm00001d037526_P001	Maize	plastid	20.19	71.75
CDY02438	Canola	cytosol	79.49	71.74
CDX72433	Canola	endoplasmic reticulum	35.45	70.57
CDY23605	Canola	cytosol	45.79	66.36
TraesCS2D01G310000.3	Wheat	plastid	56.76	60.92
CDY10557	Canola	endoplasmic reticulum, plastid	80.29	60.92
CDY56074	Canola	plastid	45.95	60.84
CDY10302	Canola	extracellular	5.88	56.92
CDY43988	Canola	cytosol	46.1	56.42
Bra027431.1-P	Field mustard	cytosol	46.26	56.07
TraesCS5D01G550700.1	Wheat	plastid	45.47	48.64
CDX86994	Canola	mitochondrion, plastid	53.42	47.86
TraesCS2D01G049500.1	Wheat	golgi, plastid	43.24	47.06
TraesCS1D01G144000.1	Wheat	mitochondrion	41.97	45.99
TraesCS1D01G365800.1	Wheat	mitochondrion	40.7	44.29
CDY40825	Canola	endoplasmic reticulum, vacuole	14.31	42.25
TraesCS4D01G305900.1	Wheat	golgi	41.65	39.82
TraesCS5D01G376000.1	Wheat	plastid	35.45	37.8
CDX85007	Canola	cytosol, plastid	42.13	26.39

Protein Annotations

MapMan:1.1.8.1.6.2.2	Gene3D:1.10.560.10	MapMan:1.2.1.2.1.2	MapMan:19.1.7.1	Gene3D:3.30.260.10	Gene3D:3.50.7.10
InterPro:Chaperonin_Cpn60_CS	InterPro:Chaprnin_Cpn60	ncoils:Coil	InterPro:Cpn60/TCP-1	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0042026	InterPro:GROEL-like_equatorial_sf	InterPro:GroEL-like_apical_dom_sf
InterPro:IPR027409	InterPro:IPR027410	InterPro:IPR027413	HAMAP:MF_00600	PFAM:PF00118	PRINTS:PR00298
ScanProsite:PS00296	PANTHER:PTHR11353	PANTHER:PTHR11353:SF8	SUPFAM:SSF48592	SUPFAM:SSF52029	SUPFAM:SSF54849
InterPro:TCP-1-like_intermed_sf	TIGRFAMs:TIGR02348	EnsemblPlantsGene:TraesCS7D01G032800	EnsemblPlants:TraesCS7D01G032800.1	TIGR:cd03344	SEG:seg

Description

No Description!

Coordinates

chr7D:-:16922485..16926908

Molecular Weight (calculated)

67476.4 Da

IEP (calculated)

5.743

GRAVY (calculated)

-0.078

Length

629 amino acids

Sequence
(BLAST)

001: MGTLVHNGVT VWHCRIAKWC DRCELVLYGG NMASPFGATS TVGLMAAPTG LVSDKKPFSL SSISLADRPR HVRLQRKCNF RVKAAKELYF NKDGSATKKL
101: QVGVNKLADL VGVTLGPKGR NVVLESKYGS PKIVNDGVTV AREVELEDPV ENIGAKLVRQ AAAKTNDLAG DGTTTSVVLA QGLIAEGVKV IAAGANPVQI
201: TRGIEKTAKA LVLELKKMSK EVEDSELADV AAVSAGNNYE IGNMIAEAMS KVGRKGVVTL EEGRSSENNL YVVEGMQFER GYISPYFVTD SEKMTTEYEN
301: CKLLLVDKKI TNARDLINVL EEAIRGQYPI LIIAEDIEQE ALATLVVNKL RGSLKICAIK APGFGERKTQ YLDDIAILTG GTVIRDEVGL TLDKADNTVL
401: GTAAKVVLTK ESTTIVGDGS TQEEVTKRVA QIKNLIEAAE QDYEKEKLNE RIAKLAGGVA VIQVGAQTET ELKEKKLRVE DALNATKAAV EEGIVVGGGC
501: TLLRLAAKVD AIKDTLDNDE QKVGAEIVRR ALCYPLKLIA KNAGVNGSVV TEKVLSNDNF KFGYNAATGQ YEDLMAAGII DPTKVVRCCL EHAASVAKTF
601: LTSDVVVVEI KEPEAAPLAN PMDNSGFGY

Best Arabidopsis Sequence Match ( AT1G55490.5 )
(BLAST)

001: MASTFTATSS IGSMVAPNGH KSDKKLISKL SSSSFGRRQS VCPRPRRSSS AIVCAAKELH FNKDGTTIRR LQAGVNKLAD LVGVTLGPKG RNVVLESKYG
101: SPRIVNDGVT VAREVELEDP VENIGAKLVR QAAAKTNDLA GDGTTTSVVL AQGFIAEGVK VVAAGANPVL ITRGIEKTAK ALVTELKKMS KEVEDSELAD
201: VAAVSAGNND EIGNMIAEAM SKVGRKGVVT LEEGKSAENN LYVVEGMQFD RGYISPYFVT DSEKMSVEFD NCKLLLVDKK ITNARDLVGV LEDAIRGGYP
301: ILIIAEDIEQ EALATLVVNK LRGTLKIAAL RAPGFGERKS QYLDDIAILT GATVIREEVG LSLDKAGKEV LGNASKVVLT KETSTIVGDG STQDAVKKRV
401: TQIKNLIEQA EQDYEKEKLN ERIAKLSGGV AVIQVGAQTE TELKEKKLRV EDALNATKAA VEEGIVVGGG CTLLRLASKV DAIKATLDND EEKVGADIVK
501: RALSYPLKLI AKNAGVNGSV VSEKVLSNDN VKFGYNAATG KYEDLMAAGI IDPTKVVRCC LEHAASVAKT FLMSDCVVVE IKEPEPVPVG NPMDNSGYGY

Arabidopsis Description

CPN60B1LEN1 [Source:UniProtKB/TrEMBL;Acc:A0A178W724]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.