Factsheet for TraesCS5D01G376000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G368900.1	Wheat	plastid	97.12	97.12
HORVU0Hr1G038830.17	Barley	plastid	96.78	96.78
TraesCS5A01G366800.1	Wheat	plastid	96.78	96.62
Os09t0563300-02	Rice	plastid	88.64	89.55
EER96340	Sorghum	plastid	87.46	88.21
VIT_01s0011g01680.t01	Wine grape	plastid	61.02	61.75
PGSC0003DMT400027020	Potato	cytosol	55.08	60.63
KRH50415	Soybean	plastid	59.15	59.45
Solyc02g068730.2.1	Tomato	plastid	58.31	59.01
CDY47184	Canola	plastid	57.46	58.65
AT5G18820.1	Thale cress	plastid	56.95	58.43
Bra023694.1-P	Field mustard	plastid	57.12	58.3
KRG89369	Soybean	plastid	58.14	58.23
CDY02601	Canola	plastid	56.78	57.96
TraesCS5D01G550700.1	Wheat	plastid	56.1	56.29
TraesCS2D01G049500.1	Wheat	golgi, plastid	54.07	55.19
Zm00001d005373_P001	Maize	plastid	87.63	43.05
TraesCS6D01G009100.1	Wheat	golgi	38.81	38.29
TraesCS6D01G031400.1	Wheat	plastid	38.14	37.63
TraesCS1D01G144000.1	Wheat	mitochondrion	36.27	37.28
TraesCS1D01G365800.1	Wheat	mitochondrion	36.44	37.2
TraesCS2D01G310000.3	Wheat	plastid	35.42	35.67
TraesCS7D01G032800.1	Wheat	cytosol	37.8	35.45
TraesCS4D01G305900.1	Wheat	golgi	36.78	32.98
GSMUA_Achr10P...	Banana	cytosol	63.9	30.75

Protein Annotations

MapMan:1.1.8.1.6.2.1	Gene3D:1.10.560.10	MapMan:1.2.1.2.1.1	MapMan:19.1.7.1	Gene3D:3.30.260.10	Gene3D:3.50.7.10
InterPro:Chaprnin_Cpn60	InterPro:Cpn60/TCP-1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0009507
GO:GO:0009536	GO:GO:0009987	GO:GO:0042026	InterPro:GROEL-like_equatorial_sf	InterPro:GroEL-like_apical_dom_sf	InterPro:IPR027409
InterPro:IPR027410	InterPro:IPR027413	PFAM:PF00118	PRINTS:PR00298	PANTHER:PTHR11353	PANTHER:PTHR11353:SF121
SUPFAM:SSF48592	SUPFAM:SSF52029	SUPFAM:SSF54849	InterPro:TCP-1-like_intermed_sf	TIGRFAMs:TIGR02348	EnsemblPlantsGene:TraesCS5D01G376000
EnsemblPlants:TraesCS5D01G376000.1	TIGR:cd03344	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr5D:+:448449419..448454157

Molecular Weight (calculated)

62350.8 Da

IEP (calculated)

6.003

GRAVY (calculated)

0.075

Length

590 amino acids

Sequence
(BLAST)

001: MSLTTASFAA PACSSSSSWP PLPRWPCRLP RPARGCRRLA VRADVKVISS GDACRRGLAA GIHKLADAVS VTLGPKGRNV VIDQDDVPKV INDGVTIAKA
101: IELPNSLEHA GAMLLQEIAT KTNSTVGDGT TTAIILAREI ISLGLLAVAN GANPVALRKG IDKAVHELLG ILKTKSIPVS TKEDIKAVAS ISAGNDEYVG
201: NLIADALEKI GPDGIIKIES SSSIYTSVEX XXXXXIDKGY TSPHFITNPD KAIVEFENAR VLLTDQRVNE IQEILPLLEK TTQLSVPLLI IAEDISHSVY
301: STLVLNKLNG LLNVAVVKCP GLGDEKKAIL QDIAIMTGAD FFVSDLGWGL QAITSDQLGM AQKITITSES TTIIAHPSMR PEIEARIMQL KKDLEETTST
401: YLKERFSARI AKLSRGVAVI KVGAATEAEL EDRKLRVEDA KNATFAAISE GITPGGGVTY VELSKHIPSI MDLVDDPEEK IGVNIVGKAL LVPAMTIARN
501: AGADGSAVVE KILESEWRVG YNAMTDKFED LVDAGVVDPC RVARCVLQNS ASIAGLILMT QAMMFDKIKK KKSPIPEIPG LPPLQINQNS

Best Arabidopsis Sequence Match ( AT1G55490.5 )
(BLAST)

001: MASTFTATSS IGSMVAPNGH KSDKKLISKL SSSSFGRRQS VCPRPRRSSS AIVCAAKELH FNKDGTTIRR LQAGVNKLAD LVGVTLGPKG RNVVLESKYG
101: SPRIVNDGVT VAREVELEDP VENIGAKLVR QAAAKTNDLA GDGTTTSVVL AQGFIAEGVK VVAAGANPVL ITRGIEKTAK ALVTELKKMS KEVEDSELAD
201: VAAVSAGNND EIGNMIAEAM SKVGRKGVVT LEEGKSAENN LYVVEGMQFD RGYISPYFVT DSEKMSVEFD NCKLLLVDKK ITNARDLVGV LEDAIRGGYP
301: ILIIAEDIEQ EALATLVVNK LRGTLKIAAL RAPGFGERKS QYLDDIAILT GATVIREEVG LSLDKAGKEV LGNASKVVLT KETSTIVGDG STQDAVKKRV
401: TQIKNLIEQA EQDYEKEKLN ERIAKLSGGV AVIQVGAQTE TELKEKKLRV EDALNATKAA VEEGIVVGGG CTLLRLASKV DAIKATLDND EEKVGADIVK
501: RALSYPLKLI AKNAGVNGSV VSEKVLSNDN VKFGYNAATG KYEDLMAAGI IDPTKVVRCC LEHAASVAKT FLMSDCVVVE IKEPEPVPVG NPMDNSGYGY

Arabidopsis Description

CPN60B1LEN1 [Source:UniProtKB/TrEMBL;Acc:A0A178W724]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.