Factsheet for Zm00001d031503_P001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

mitochondrion 2
endoplasmic reticulum 3
extracellular 2
vacuole 2
plasma membrane 2
golgi 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d000399_P001	Maize	plastid	70.16	14.9
Zm00001d034919_P001	Maize	plastid	61.29	13.01
Zm00001d035937_P001	Maize	plastid	41.94	8.98
Zm00001d032789_P001	Maize	plastid	41.13	8.85
Zm00001d045544_P002	Maize	plastid	41.94	8.67
Zm00001d028409_P001	Maize	plastid	40.32	8.5
Zm00001d014090_P002	Maize	mitochondrion	39.52	8.49
Zm00001d054089_P002	Maize	plastid	40.32	8.1
Zm00001d038857_P001	Maize	mitochondrion	37.1	7.93
Zm00001d051252_P001	Maize	cytosol	9.68	5.85
Zm00001d005373_P001	Maize	plastid	45.16	4.66
Zm00001d046709_P001	Maize	mitochondrion	5.65	4.46
Zm00001d053279_P001	Maize	mitochondrion	5.65	4.46
Zm00001d017567_P001	Maize	cytosol	5.65	4.24
Zm00001d037526_P001	Maize	plastid	5.65	3.95
Zm00001d016540_P001	Maize	cytosol	1.61	1.92
Zm00001d013912_P001	Maize	mitochondrion	1.61	1.56

Protein Annotations

EnsemblPlants:Zm00001d031503_P001	EnsemblPlants:Zm00001d031503_T001	EnsemblPlantsGene:Zm00001d031503	Gene3D:1.10.560.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	InterPro:Cpn60/TCP-1	InterPro:GROEL-like_equatorial_sf	InterPro:IPR027413	PANTHER:PTHR11353
PANTHER:PTHR11353:SF179	PFAM:PF00118	ProteinID:ONM03013.1	SEG:seg	SUPFAM:SSF48592	UniParc:UPI0008435305
UniProt:A0A1D6KJ89	MapMan:35.1	:	:	:	:

Description

Chaperonin 60 subunit alpha 2 chloroplastic

Coordinates

chr1:+:192155541..192156325

Molecular Weight (calculated)

13231.1 Da

IEP (calculated)

4.624

GRAVY (calculated)

0.280

Length

124 amino acids

Sequence
(BLAST)

001: MFICAVDTYT GSFRAINHVF TLSSLLVQAL VAPASLIAHN AGVEGEVVVE KIKESDWEVG YNAMTDKYEN LMEASVIDPT KVTKCALQNA ASVAGMVLIT
101: QAIVVEKPKP KPQVAEPPEG ALTV

Best Arabidopsis Sequence Match ( AT2G28000.1 )
(BLAST)

001: MASANALSSA SVLCSSRQSK LGGGNQQQGQ RVSYNKRTIR RFSVRANVKE IAFDQHSRAA LQAGIDKLAD CVGLTLGPRG RNVVLDEFGS PKVVNDGVTI
101: ARAIELPNAM ENAGAALIRE VASKTNDSAG DGTTTASILA REIIKHGLLS VTSGANPVSL KRGIDKTVQG LIEELQKKAR PVKGRDDIRA VASISAGNDD
201: LIGSMIADAI DKVGPDGVLS IESSSSFETT VEVEEGMEID RGYISPQFVT NPEKLLAEFE NARVLITDQK ITAIKDIIPI LEKTTQLRAP LLIIAEDVTG
301: EALATLVVNK LRGVLNVVAV KAPGFGERRK AMLQDIAILT GAEYLAMDMS LLVENATIDQ LGIARKVTIS KDSTTLIADA ASKDELQARI AQLKKELFET
401: DSVYDSEKLA ERIAKLSGGV AVIKVGAATE TELEDRKLRI EDAKNATFAA IEEGIVPGGG AALVHLSTVI PAIKETFEDA DERLGADIVQ KALLSPAALI
501: AQNAGVEGEV VVEKIMFSDW ENGYNAMTDT YENLFEAGVI DPAKVTRCAL QNAASVAGMV LTTQAIVVDK PKPKAPAAAA PEGLMV

Arabidopsis Description

CPN60A1SLP [Source:UniProtKB/TrEMBL;Acc:A0A178VZW6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.