Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY26402 | Canola | cytosol | 67.01 | 66.55 |
| Bra039533.1-P | Field mustard | cytosol, nucleus, plastid | 66.67 | 66.22 |
| CDY71192 | Canola | cytosol | 62.93 | 66.07 |
| AT4G19700.1 | Thale cress | cytosol | 67.69 | 65.46 |
| Bra027588.1-P | Field mustard | cytosol, nucleus, plastid | 61.9 | 65.23 |
| CDY13070 | Canola | cytosol | 61.56 | 64.87 |
| Bra028364.1-P | Field mustard | cytosol, nucleus, plastid | 60.2 | 62.77 |
| CDY46345 | Canola | cytosol | 59.86 | 62.41 |
| CDY18062 | Canola | cytosol | 59.86 | 62.41 |
| KRH36722 | Soybean | nucleus | 49.66 | 47.1 |
| KRH11729 | Soybean | nucleus | 49.66 | 46.65 |
| VIT_10s0042g01070.t01 | Wine grape | nucleus | 47.28 | 45.87 |
| KRH50476 | Soybean | cytosol, nucleus, plastid | 48.98 | 45.0 |
| KRG89416 | Soybean | nucleus | 47.62 | 44.59 |
| PGSC0003DMT400062617 | Potato | nucleus | 44.56 | 43.67 |
| PGSC0003DMT400026783 | Potato | cytosol, mitochondrion, nucleus, plastid, vacuole | 46.26 | 42.11 |
| Solyc02g031710.2.1 | Tomato | nucleus | 44.22 | 41.94 |
| GSMUA_Achr2P13160_001 | Banana | plastid | 33.67 | 40.08 |
| GSMUA_Achr7P00850_001 | Banana | plastid | 30.95 | 39.57 |
| GSMUA_Achr4P23050_001 | Banana | nucleus | 24.49 | 38.3 |
| GSMUA_Achr4P28300_001 | Banana | nucleus | 30.61 | 37.34 |
| Solyc02g069180.2.1 | Tomato | plastid | 35.37 | 36.75 |
| AT3G12920.1 | Thale cress | nucleus | 41.16 | 36.12 |
| GSMUA_Achr4P32070_001 | Banana | nucleus | 35.03 | 36.01 |
| GSMUA_Achr5P02100_001 | Banana | plastid | 29.25 | 35.25 |
| GSMUA_Achr6P31690_001 | Banana | nucleus | 34.35 | 33.89 |
| AT1G79110.1 | Thale cress | nucleus | 40.82 | 33.52 |
| GSMUA_Achr9P09830_001 | Banana | nucleus | 35.71 | 32.71 |
| TraesCS3D01G441300.1 | Wheat | mitochondrion | 30.95 | 31.38 |
| TraesCS3D01G441000.1 | Wheat | mitochondrion | 30.95 | 31.38 |
| TraesCS3B01G484600.1 | Wheat | cytosol | 29.25 | 31.27 |
| TraesCS3A01G448500.1 | Wheat | mitochondrion | 30.95 | 31.06 |
| TraesCS7D01G431300.1 | Wheat | mitochondrion | 32.65 | 30.67 |
| TraesCS6A01G079900.1 | Wheat | cytosol, mitochondrion, plastid | 24.83 | 30.54 |
| TraesCS4D01G018100.1 | Wheat | mitochondrion, nucleus | 30.95 | 30.03 |
| EER91098 | Sorghum | nucleus | 35.71 | 29.58 |
| HORVU6Hr1G021960.1 | Barley | plastid | 26.19 | 29.5 |
| HORVU6Hr1G021880.1 | Barley | plastid | 26.19 | 29.5 |
| HORVU4Hr1G003180.3 | Barley | mitochondrion | 30.61 | 29.32 |
| Zm00001d013571_P001 | Maize | cytosol, nucleus, plastid | 32.65 | 29.09 |
| TraesCS4B01G019600.1 | Wheat | mitochondrion | 30.61 | 29.03 |
| TraesCS7B01G340700.1 | Wheat | mitochondrion | 30.61 | 28.85 |
| TraesCS7A01G442300.1 | Wheat | mitochondrion | 30.95 | 28.71 |
| TraesCS7A01G442100.1 | Wheat | mitochondrion | 30.61 | 28.66 |
| TraesCS7B01G340600.1 | Wheat | mitochondrion | 30.27 | 28.53 |
| TraesCS6D01G110700.1 | Wheat | nucleus | 25.51 | 28.52 |
| HORVU7Hr1G100540.2 | Barley | mitochondrion | 29.25 | 28.29 |
| TraesCS7B01G340500.1 | Wheat | mitochondrion | 30.27 | 28.25 |
| TraesCS4A01G293700.1 | Wheat | mitochondrion | 29.59 | 28.25 |
| TraesCS6B01G149100.1 | Wheat | nucleus | 25.17 | 28.14 |
| TraesCS6D01G073600.1 | Wheat | cytosol, nucleus, plastid | 25.85 | 28.04 |
| HORVU7Hr1G100520.1 | Barley | cytosol, mitochondrion | 29.25 | 28.01 |
| TraesCS7D01G431200.1 | Wheat | mitochondrion | 28.91 | 27.6 |
| TraesCS7A01G441900.1 | Wheat | mitochondrion | 29.59 | 27.53 |
| TraesCS6A01G120700.1 | Wheat | nucleus | 24.49 | 27.38 |
| TraesCS7D01G431100.1 | Wheat | mitochondrion, nucleus | 28.57 | 26.75 |
| Zm00001d033419_P001 | Maize | plastid | 23.81 | 25.0 |
| AT1G32740.1 | Thale cress | nucleus | 24.83 | 23.4 |
| AT4G35070.1 | Thale cress | cytosol | 20.41 | 22.64 |
| AT5G47050.1 | Thale cress | nucleus | 22.11 | 21.67 |
| AT4G17680.1 | Thale cress | nucleus | 21.43 | 20.06 |
| AT1G10650.1 | Thale cress | nucleus | 22.79 | 19.76 |
| AT1G60610.4 | Thale cress | nucleus | 21.77 | 18.82 |
| AT1G45976.1 | Thale cress | cytosol | 19.39 | 17.54 |
Protein Annotations
| Gene3D:3.30.40.10 | MapMan:35.1 | EntrezGene:834543 | ProteinID:AED95201.1 | ProteinID:AED95202.1 | ArrayExpress:AT5G45100 |
| EnsemblPlantsGene:AT5G45100 | RefSeq:AT5G45100 | TAIR:AT5G45100 | RefSeq:AT5G45100-TAIR-G | EnsemblPlants:AT5G45100.1 | TAIR:AT5G45100.1 |
| EMBL:AY058839 | EMBL:AY143844 | Unigene:At.26652 | ProteinID:BAB09495.1 | ncoils:Coil | InterPro:E3ligase_BOI_like |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 | GO:GO:0005488 | GO:GO:0006464 | GO:GO:0006950 |
| GO:GO:0006952 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008219 | GO:GO:0009056 | GO:GO:0009987 |
| GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0043067 | GO:GO:0043161 | GO:GO:0046872 |
| InterPro:IPR001841 | InterPro:IPR013083 | RefSeq:NP_199323.2 | RefSeq:NP_851134.1 | PFAM:PF13920 | PIRSF:PIRSF036836 |
| PO:PO:0000293 | PFscan:PS50089 | PANTHER:PTHR42647 | PANTHER:PTHR42647:SF12 | UniProt:Q9FHE4 | UniParc:UPI00000AC321 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | : | : | : | : |
Description
BRG1BOI-related E3 ubiquitin-protein ligase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHE4]
Coordinates
chr5:+:18218603..18220047
Molecular Weight (calculated)
32550.7 Da
IEP (calculated)
5.461
GRAVY (calculated)
-0.295
Length
294 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVEARHMNL FSSQYITNRE CVKSQTNMNN GQQIAGGGFP VTIGDRNLQY IDPINSFNKS ESELTAISKR QRDSTFDSDA LIASQKRRAI AFSPASLIDA
101: ELVSQIQQQN SEIDRFVAQQ TETLRIELEA RQRTQTRMLA SAVQNAILKK LKAKDEEIIR MGKLNWVLQE RVKNLYVENQ IWRDLAQTNE ATANNLRSNL
201: EQVLAQVDDL DAFRRPLVEE ADDAESSCGS CDGGDVTAVV NGGCKRCGEL TASVLVLPCR HLCLCTVCGS SALLRTCPVC DMVMTASVHV NMSS
101: ELVSQIQQQN SEIDRFVAQQ TETLRIELEA RQRTQTRMLA SAVQNAILKK LKAKDEEIIR MGKLNWVLQE RVKNLYVENQ IWRDLAQTNE ATANNLRSNL
201: EQVLAQVDDL DAFRRPLVEE ADDAESSCGS CDGGDVTAVV NGGCKRCGEL TASVLVLPCR HLCLCTVCGS SALLRTCPVC DMVMTASVHV NMSS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.