Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039533.1-P | Field mustard | cytosol, nucleus, plastid | 98.31 | 98.31 |
| CDY71192 | Canola | cytosol | 64.19 | 67.86 |
| CDY13070 | Canola | cytosol | 63.51 | 67.38 |
| AT5G45100.1 | Thale cress | cytosol | 66.55 | 67.01 |
| CDY18062 | Canola | cytosol | 62.84 | 65.96 |
| CDY46345 | Canola | cytosol | 62.5 | 65.6 |
| CDY21311 | Canola | cytosol | 48.99 | 61.97 |
| CDY09318 | Canola | cytosol | 48.99 | 61.97 |
| CDY07541 | Canola | cytosol | 48.99 | 61.97 |
| CDX94520 | Canola | cytosol | 48.99 | 61.97 |
| CDY01615 | Canola | cytosol | 61.15 | 59.34 |
| CDY71607 | Canola | cytosol | 60.81 | 58.82 |
| CDY51918 | Canola | cytosol | 55.74 | 57.49 |
| KRH36722 | Soybean | nucleus | 48.31 | 46.13 |
| KRH11729 | Soybean | nucleus | 47.97 | 45.37 |
| VIT_10s0042g01070.t01 | Wine grape | nucleus | 43.92 | 42.9 |
| KRG89416 | Soybean | nucleus | 44.93 | 42.36 |
| PGSC0003DMT400062617 | Potato | nucleus | 42.57 | 42.0 |
| KRH50476 | Soybean | cytosol, nucleus, plastid | 45.27 | 41.88 |
| PGSC0003DMT400026783 | Potato | cytosol, mitochondrion, nucleus, plastid, vacuole | 45.61 | 41.8 |
| GSMUA_Achr2P13160_001 | Banana | plastid | 34.8 | 41.7 |
| GSMUA_Achr4P23050_001 | Banana | nucleus | 26.01 | 40.96 |
| GSMUA_Achr7P00850_001 | Banana | plastid | 31.76 | 40.87 |
| Solyc02g031710.2.1 | Tomato | nucleus | 41.89 | 40.0 |
| GSMUA_Achr4P32070_001 | Banana | nucleus | 37.84 | 39.16 |
| GSMUA_Achr4P28300_001 | Banana | nucleus | 31.42 | 38.59 |
| GSMUA_Achr5P02100_001 | Banana | plastid | 31.76 | 38.52 |
| CDX87407 | Canola | nucleus | 38.85 | 36.39 |
| CDX88507 | Canola | nucleus | 36.15 | 35.91 |
| Solyc02g069180.2.1 | Tomato | plastid | 34.12 | 35.69 |
| CDX79294 | Canola | nucleus | 36.15 | 35.2 |
| CDY34127 | Canola | extracellular | 7.09 | 35.0 |
| GSMUA_Achr6P31690_001 | Banana | nucleus | 35.14 | 34.9 |
| CDY43390 | Canola | cytosol | 37.16 | 33.85 |
| CDY24237 | Canola | nucleus | 36.82 | 33.64 |
| GSMUA_Achr9P09830_001 | Banana | nucleus | 35.47 | 32.71 |
| CDX82568 | Canola | nucleus | 37.16 | 32.35 |
| CDY64561 | Canola | nucleus | 36.82 | 32.06 |
| TraesCS7D01G431300.1 | Wheat | mitochondrion | 33.11 | 31.31 |
| TraesCS3D01G441300.1 | Wheat | mitochondrion | 30.41 | 31.03 |
| TraesCS3A01G448500.1 | Wheat | mitochondrion | 30.41 | 30.72 |
| TraesCS3D01G441000.1 | Wheat | mitochondrion | 30.07 | 30.69 |
| TraesCS3B01G484600.1 | Wheat | cytosol | 28.38 | 30.55 |
| TraesCS6A01G079900.1 | Wheat | cytosol, mitochondrion, plastid | 24.66 | 30.54 |
| TraesCS7A01G442100.1 | Wheat | mitochondrion | 32.09 | 30.25 |
| TraesCS4B01G019600.1 | Wheat | mitochondrion | 31.08 | 29.68 |
| HORVU4Hr1G003180.3 | Barley | mitochondrion | 30.74 | 29.64 |
| TraesCS4D01G018100.1 | Wheat | mitochondrion, nucleus | 30.07 | 29.37 |
| EER91098 | Sorghum | nucleus | 35.14 | 29.3 |
| TraesCS7B01G340700.1 | Wheat | mitochondrion | 30.41 | 28.85 |
| Zm00001d013571_P001 | Maize | cytosol, nucleus, plastid | 32.09 | 28.79 |
| HORVU6Hr1G021880.1 | Barley | plastid | 25.34 | 28.74 |
| HORVU6Hr1G021960.1 | Barley | plastid | 25.34 | 28.74 |
| TraesCS7A01G442300.1 | Wheat | mitochondrion | 30.74 | 28.71 |
| HORVU7Hr1G100520.1 | Barley | cytosol, mitochondrion | 29.73 | 28.66 |
| TraesCS7B01G340600.1 | Wheat | mitochondrion | 30.07 | 28.53 |
| TraesCS7B01G340500.1 | Wheat | mitochondrion | 30.07 | 28.25 |
| TraesCS7D01G431200.1 | Wheat | mitochondrion | 29.39 | 28.25 |
| TraesCS4A01G293700.1 | Wheat | mitochondrion | 29.39 | 28.25 |
| TraesCS6D01G073600.1 | Wheat | cytosol, nucleus, plastid | 25.68 | 28.04 |
| TraesCS7A01G441900.1 | Wheat | mitochondrion | 29.73 | 27.85 |
| HORVU7Hr1G100540.2 | Barley | mitochondrion | 28.38 | 27.63 |
| TraesCS6D01G110700.1 | Wheat | nucleus | 24.32 | 27.38 |
| TraesCS7D01G431100.1 | Wheat | mitochondrion, nucleus | 28.72 | 27.07 |
| CDX69109 | Canola | nucleus | 18.58 | 26.83 |
| TraesCS6B01G149100.1 | Wheat | nucleus | 23.65 | 26.62 |
| CDY52651 | Canola | cytosol | 19.59 | 26.24 |
| TraesCS6A01G120700.1 | Wheat | nucleus | 22.97 | 25.86 |
| CDY40647 | Canola | cytosol | 19.93 | 25.11 |
| Zm00001d033419_P001 | Maize | plastid | 23.65 | 25.0 |
| CDX72513 | Canola | cytosol | 19.59 | 24.79 |
| CDY23552 | Canola | cytosol | 17.91 | 24.42 |
| CDX73168 | Canola | cytosol | 20.61 | 24.3 |
| CDY15019 | Canola | cytosol | 20.61 | 24.3 |
| CDX76311 | Canola | cytosol | 20.27 | 23.72 |
| CDY17506 | Canola | cytosol, nucleus, plastid | 20.27 | 23.72 |
| CDX77733 | Canola | nucleus | 23.99 | 23.67 |
| CDY33511 | Canola | nucleus | 23.99 | 23.43 |
| CDY51856 | Canola | cytosol | 23.65 | 23.1 |
| CDY43447 | Canola | nucleus | 22.64 | 22.19 |
| CDY37172 | Canola | cytosol | 22.64 | 22.19 |
| CDY03162 | Canola | cytosol | 23.65 | 21.74 |
| CDX90458 | Canola | cytosol | 21.62 | 21.05 |
| CDX93396 | Canola | cytosol | 23.65 | 20.83 |
| CDY09609 | Canola | cytosol | 17.23 | 20.65 |
| CDY37958 | Canola | cytosol, plastid | 23.31 | 20.35 |
| CDY24542 | Canola | nucleus | 22.3 | 20.18 |
| CDY17103 | Canola | cytosol | 19.93 | 19.93 |
| CDY20963 | Canola | nucleus | 22.64 | 19.82 |
| CDY40841 | Canola | cytosol | 19.93 | 19.73 |
| CDY20611 | Canola | nucleus | 22.64 | 19.65 |
| CDY17048 | Canola | cytosol | 20.61 | 19.61 |
| CDY06767 | Canola | cytosol | 19.26 | 18.75 |
Protein Annotations
| EnsemblPlants:CDY26402 | EnsemblPlantsGene:GSBRNA2T00035177001 | Gene3D:3.30.40.10 | GO:A0A078GMG8 | InterPro:E3ligase_BOI_like | InterPro:IPR001841 |
| InterPro:IPR013083 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | KEGG:00220+6.3.2.- | KEGG:00261+6.3.2.- | KEGG:00380+6.3.2.- |
| PANTHER:PTHR42647 | PANTHER:PTHR42647:SF12 | PFAM:PF13920 | PFscan:PS50089 | PIRSF:PIRSF036836 | ProteinID:CDY26402 |
| ProteinID:CDY26402.1 | UniParc:UPI0004EE46B4 | UniPathway:UPA00144 | UniProt:A0A078GMG8 | MapMan:35.1 | : |
Description
BnaA02g23680DBnaA02g23680D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GMG8]
Coordinates
chrLK032189:-:488429..489483
Molecular Weight (calculated)
32517.2 Da
IEP (calculated)
5.030
GRAVY (calculated)
-0.397
Length
296 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVEATYMNL FASQFTTTGE YVKSEPNMNN DITVGFPTTF GVQKLPYART IESESDLTYN FNQSPAPPSI SKRQRDHTFD INAPMPSQKR RSCAFEPQTS
101: FIDAQIQQQQ SEIDRFVAQQ TETLRLELEA RQQTQTRILA SAVQSAIIKT LKAKDDEIAR MGKLNGALQE RVKSLYVENQ IWRDLAQTNE ATANTLRSNL
201: EQVLAQVDDF PGTANGGDGF RHSVEEDAVS SCGSCEGADG AVTGGCRRCG ERRASVLVLP CRHLCLCTVC GSALLQACPV CDTVMNASVH VNMSDS
101: FIDAQIQQQQ SEIDRFVAQQ TETLRLELEA RQQTQTRILA SAVQSAIIKT LKAKDDEIAR MGKLNGALQE RVKSLYVENQ IWRDLAQTNE ATANTLRSNL
201: EQVLAQVDDF PGTANGGDGF RHSVEEDAVS SCGSCEGADG AVTGGCRRCG ERRASVLVLP CRHLCLCTVC GSALLQACPV CDTVMNASVH VNMSDS
001: MAVEARHMNL FSSQYITNRE CVKSQTNMNN GQQIAGGGFP VTIGDRNLQY IDPINSFNKS ESELTAISKR QRDSTFDSDA LIASQKRRAI AFSPASLIDA
101: ELVSQIQQQN SEIDRFVAQQ TETLRIELEA RQRTQTRMLA SAVQNAILKK LKAKDEEIIR MGKLNWVLQE RVKNLYVENQ IWRDLAQTNE ATANNLRSNL
201: EQVLAQVDDL DAFRRPLVEE ADDAESSCGS CDGGDVTAVV NGGCKRCGEL TASVLVLPCR HLCLCTVCGS SALLRTCPVC DMVMTASVHV NMSS
101: ELVSQIQQQN SEIDRFVAQQ TETLRIELEA RQRTQTRMLA SAVQNAILKK LKAKDEEIIR MGKLNWVLQE RVKNLYVENQ IWRDLAQTNE ATANNLRSNL
201: EQVLAQVDDL DAFRRPLVEE ADDAESSCGS CDGGDVTAVV NGGCKRCGEL TASVLVLPCR HLCLCTVCGS SALLRTCPVC DMVMTASVHV NMSS
Arabidopsis Description
BRG1BOI-related E3 ubiquitin-protein ligase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHE4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.