Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040255.1-P | Field mustard | nucleus | 73.68 | 97.82 |
| CDY17103 | Canola | cytosol | 91.12 | 93.58 |
| AT1G45976.1 | Thale cress | cytosol | 86.18 | 80.62 |
| CDY40841 | Canola | cytosol | 77.63 | 78.93 |
| CDY17048 | Canola | cytosol | 79.93 | 78.14 |
| KRH05668 | Soybean | nucleus | 63.49 | 56.43 |
| Solyc04g078760.2.1 | Tomato | nucleus | 61.84 | 55.62 |
| KRH15376 | Soybean | nucleus, plastid | 63.16 | 54.7 |
| VIT_18s0001g10370.t01 | Wine grape | nucleus | 58.88 | 54.57 |
| PGSC0003DMT400020551 | Potato | nucleus | 61.51 | 50.0 |
| GSMUA_Achr10P... | Banana | nucleus | 49.67 | 47.48 |
| GSMUA_Achr6P10180_001 | Banana | plastid | 50.33 | 44.09 |
| Os03t0263800-01 | Rice | nucleus, plastid | 49.34 | 43.86 |
| Zm00001d047856_P001 | Maize | nucleus, plastid | 46.71 | 43.16 |
| EER95135 | Sorghum | plastid | 47.7 | 43.03 |
| GSMUA_Achr11P... | Banana | nucleus | 52.63 | 42.78 |
| TraesCS4D01G215600.1 | Wheat | plastid | 47.37 | 42.48 |
| TraesCS4B01G215100.1 | Wheat | plastid | 47.37 | 42.48 |
| TraesCS4A01G089200.1 | Wheat | plastid | 47.04 | 42.18 |
| Zm00001d028532_P001 | Maize | nucleus, plastid | 46.71 | 42.14 |
| CDY34127 | Canola | extracellular | 7.24 | 36.67 |
| HORVU4Hr1G061210.1 | Barley | cytosol | 47.7 | 35.11 |
| CDX93396 | Canola | cytosol | 32.89 | 29.76 |
| CDY37958 | Canola | cytosol, plastid | 32.24 | 28.91 |
| CDY24542 | Canola | nucleus | 30.26 | 28.13 |
| CDY20963 | Canola | nucleus | 31.25 | 28.11 |
| CDY20611 | Canola | nucleus | 31.25 | 27.86 |
| CDY09609 | Canola | cytosol | 22.04 | 27.13 |
| CDY33511 | Canola | nucleus | 25.99 | 26.07 |
| CDX77733 | Canola | nucleus | 25.66 | 26.0 |
| CDX69109 | Canola | nucleus | 17.43 | 25.85 |
| CDY43447 | Canola | nucleus | 25.33 | 25.5 |
| CDY51856 | Canola | cytosol | 24.34 | 24.42 |
| CDX72513 | Canola | cytosol | 18.75 | 24.36 |
| CDY52651 | Canola | cytosol | 17.43 | 23.98 |
| CDY03162 | Canola | cytosol | 25.33 | 23.91 |
| CDY15019 | Canola | cytosol | 19.74 | 23.9 |
| CDX73168 | Canola | cytosol | 19.74 | 23.9 |
| CDY40647 | Canola | cytosol | 18.42 | 23.83 |
| CDX76311 | Canola | cytosol | 19.74 | 23.72 |
| CDY37172 | Canola | cytosol | 23.36 | 23.51 |
| CDY17506 | Canola | cytosol, nucleus, plastid | 19.41 | 23.32 |
| CDX90458 | Canola | cytosol | 22.7 | 22.7 |
| CDX88507 | Canola | nucleus | 21.38 | 21.81 |
| CDY21311 | Canola | cytosol | 16.78 | 21.79 |
| CDY07541 | Canola | cytosol | 16.78 | 21.79 |
| CDY09318 | Canola | cytosol | 16.78 | 21.79 |
| CDX94520 | Canola | cytosol | 16.78 | 21.79 |
| CDX79294 | Canola | nucleus | 21.71 | 21.71 |
| CDX87407 | Canola | nucleus | 22.04 | 21.2 |
| CDY24237 | Canola | nucleus | 21.71 | 20.37 |
| CDX82568 | Canola | nucleus | 22.7 | 20.29 |
| CDY64561 | Canola | nucleus | 22.7 | 20.29 |
| CDY43390 | Canola | cytosol | 21.38 | 20.0 |
| CDY51918 | Canola | cytosol | 18.75 | 19.86 |
| CDY26402 | Canola | cytosol | 18.75 | 19.26 |
| CDY01615 | Canola | cytosol | 18.75 | 18.69 |
| CDY71607 | Canola | cytosol | 18.75 | 18.63 |
| CDY18062 | Canola | cytosol | 17.11 | 18.44 |
| CDY46345 | Canola | cytosol | 17.11 | 18.44 |
| CDY13070 | Canola | cytosol | 16.78 | 18.28 |
| CDY71192 | Canola | cytosol | 16.78 | 18.21 |
| CDY23552 | Canola | cytosol | 9.87 | 13.82 |
Protein Annotations
| EnsemblPlants:CDY06767 | EnsemblPlantsGene:GSBRNA2T00122987001 | Gene3D:3.30.40.10 | GO:A0A078F0U6 | InterPro:E3ligase_BOI_like | InterPro:IPR001841 |
| InterPro:IPR013083 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | ncoils:Coil | PANTHER:PTHR42647 | PANTHER:PTHR42647:SF10 |
| PFAM:PF13920 | PFscan:PS50089 | PIRSF:PIRSF036836 | ProteinID:CDY06767 | ProteinID:CDY06767.1 | UniParc:UPI0004EE0DC6 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaA10g05460D
Coordinates
chrLK031972:-:996049..997401
Molecular Weight (calculated)
34517.0 Da
IEP (calculated)
4.924
GRAVY (calculated)
-0.518
Length
304 amino acids
Sequence
(BLAST)
(BLAST)
001: MALPHHLDPH LQDSKNFRDF CGQISPELGF NSSTNLHDQS QHPPYIPPFH VAGFAPVVQI DGGEWNSFGR ERVKEMDFLD NSSQISSIDF WQGRSVSTGL
101: GLSLDSAPIG SSDGSALLSL VRDDVERELQ RQDAEIDRFL KIQGDQLRHA VLDKIQRSQY KTLALMEERV VQKLREKDEE LEMINRTNKE LEVRIEQLAM
201: EADAWQQRAK YNENMIAALN YNLERAQGRP RDSIEGCGDS EVDDTASCFN GRNSKMMCRF CGVGEVCMLL LPCKHMCLCK ECERNLSSCP LCQSSKFLGM
301: EVYM
101: GLSLDSAPIG SSDGSALLSL VRDDVERELQ RQDAEIDRFL KIQGDQLRHA VLDKIQRSQY KTLALMEERV VQKLREKDEE LEMINRTNKE LEVRIEQLAM
201: EADAWQQRAK YNENMIAALN YNLERAQGRP RDSIEGCGDS EVDDTASCFN GRNSKMMCRF CGVGEVCMLL LPCKHMCLCK ECERNLSSCP LCQSSKFLGM
301: EVYM
001: MALHPHLQDS KNFRDFCGID GQISPELGFN RSENLHDQSQ HPPYIPPFHV AGFAPGPVVQ IDGSDGGNGA DFEWNYGLGL EPRRERIKEQ DFLENNSQIS
101: SIDFLQARSV STGLGLSLDN ARVASSDGSA LLSLVGDDID RELQRQDADI DRFLKIQGDQ LRHAILDKIK RGQQKTVSLM EEKVVQKLRE KDEELERINR
201: KNKELEVRME QLTMEAEAWQ QRAKYNENMI AALNYNLDRA QGRPRDSIEG CGDSEVDDTA SCFNGRDNSN NNTKTMMMCR FCGVREMCML LLPCNHMCLC
301: KECERKLSSC PLCQSSKFLG MEVYM
101: SIDFLQARSV STGLGLSLDN ARVASSDGSA LLSLVGDDID RELQRQDADI DRFLKIQGDQ LRHAILDKIK RGQQKTVSLM EEKVVQKLRE KDEELERINR
201: KNKELEVRME QLTMEAEAWQ QRAKYNENMI AALNYNLDRA QGRPRDSIEG CGDSEVDDTA SCFNGRDNSN NNTKTMMMCR FCGVREMCML LLPCNHMCLC
301: KECERKLSSC PLCQSSKFLG MEVYM
Arabidopsis Description
SBP1SBP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WK23]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.