Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- cytosol 2
- mitochondrion 1
- extracellular 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011582.1-P | Field mustard | cytosol, nucleus, plastid | 96.38 | 96.38 |
| CDX69109 | Canola | nucleus | 84.16 | 90.73 |
| CDY40647 | Canola | cytosol | 72.4 | 68.09 |
| CDX72513 | Canola | cytosol | 71.49 | 67.52 |
| CDX76311 | Canola | cytosol | 76.47 | 66.8 |
| CDX73168 | Canola | cytosol | 75.11 | 66.14 |
| CDY15019 | Canola | cytosol | 75.11 | 66.14 |
| CDY17506 | Canola | cytosol, nucleus, plastid | 75.11 | 65.61 |
| AT4G35070.1 | Thale cress | cytosol | 69.68 | 58.11 |
| VIT_03s0038g02450.t01 | Wine grape | nucleus | 39.82 | 40.74 |
| Solyc01g111610.2.1 | Tomato | cytosol | 38.01 | 34.57 |
| PGSC0003DMT400068728 | Potato | mitochondrion, nucleus | 41.18 | 34.47 |
| PGSC0003DMT400015829 | Potato | nucleus | 38.46 | 33.73 |
| Solyc10g055560.1.1 | Tomato | nucleus | 41.18 | 33.7 |
| KRH51394 | Soybean | nucleus | 38.46 | 29.62 |
| KRH60696 | Soybean | nucleus, plastid | 38.46 | 29.11 |
| CDY34127 | Canola | extracellular | 7.69 | 28.33 |
| KRG94235 | Soybean | cytosol | 31.22 | 27.82 |
| KRH24321 | Soybean | cytosol | 36.2 | 27.78 |
| KRH29000 | Soybean | cytosol | 35.29 | 27.18 |
| CDY09609 | Canola | cytosol | 24.43 | 21.86 |
| CDY09318 | Canola | cytosol | 22.62 | 21.37 |
| CDY07541 | Canola | cytosol | 22.62 | 21.37 |
| CDX94520 | Canola | cytosol | 22.62 | 21.37 |
| CDY21311 | Canola | cytosol | 22.62 | 21.37 |
| CDY26402 | Canola | cytosol | 26.24 | 19.59 |
| CDY43447 | Canola | nucleus | 26.7 | 19.54 |
| CDY33511 | Canola | nucleus | 26.7 | 19.47 |
| CDX77733 | Canola | nucleus | 26.24 | 19.33 |
| CDY51856 | Canola | cytosol | 26.24 | 19.14 |
| CDX88507 | Canola | nucleus | 25.79 | 19.13 |
| CDX79294 | Canola | nucleus | 26.24 | 19.08 |
| CDY40841 | Canola | cytosol | 25.79 | 19.06 |
| CDY24237 | Canola | nucleus | 27.6 | 18.83 |
| CDY43390 | Canola | cytosol | 27.6 | 18.77 |
| CDX90458 | Canola | cytosol | 25.79 | 18.75 |
| CDX87407 | Canola | nucleus | 26.7 | 18.67 |
| CDY37172 | Canola | cytosol | 25.34 | 18.54 |
| CDY51918 | Canola | cytosol | 23.98 | 18.47 |
| CDY18062 | Canola | cytosol | 23.53 | 18.44 |
| CDY01615 | Canola | cytosol | 25.34 | 18.36 |
| CDY13070 | Canola | cytosol | 23.08 | 18.28 |
| CDY71192 | Canola | cytosol | 23.08 | 18.21 |
| CDY46345 | Canola | cytosol | 23.08 | 18.09 |
| CDY03162 | Canola | cytosol | 26.24 | 18.01 |
| CDY71607 | Canola | cytosol | 24.89 | 17.97 |
| CDY17103 | Canola | cytosol | 23.98 | 17.91 |
| CDY17048 | Canola | cytosol | 24.89 | 17.68 |
| CDY06767 | Canola | cytosol | 23.98 | 17.43 |
| CDX82568 | Canola | nucleus | 25.79 | 16.76 |
| CDY64561 | Canola | nucleus | 25.34 | 16.47 |
| CDX93396 | Canola | cytosol | 23.53 | 15.48 |
| CDY37958 | Canola | cytosol, plastid | 23.08 | 15.04 |
| CDY20611 | Canola | nucleus | 22.62 | 14.66 |
| CDY20963 | Canola | nucleus | 21.72 | 14.2 |
| CDY24542 | Canola | nucleus | 20.36 | 13.76 |
| CDY23552 | Canola | cytosol | 9.5 | 9.68 |
Protein Annotations
| KEGG:00220+6.3.2.- | KEGG:00261+6.3.2.- | KEGG:00380+6.3.2.- | Gene3D:3.30.40.10 | MapMan:35.1 | GO:A0A078IS18 |
| UniProt:A0A078IS18 | EnsemblPlants:CDY52651 | ProteinID:CDY52651 | ProteinID:CDY52651.1 | ncoils:Coil | InterPro:E3ligase_BOI_like |
| EnsemblPlantsGene:GSBRNA2T00007453001 | InterPro:IPR013083 | PFAM:PF13920 | PIRSF:PIRSF036836 | PANTHER:PTHR42647 | PANTHER:PTHR42647:SF6 |
| UniPathway:UPA00144 | UniParc:UPI0004EF2FA4 | InterPro:Znf_RING/FYVE/PHD | : | : | : |
Description
BnaAnng11660DBnaAnng11660D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IS18]
Coordinates
chrLK033111:-:52909..53798
Molecular Weight (calculated)
25408.4 Da
IEP (calculated)
5.812
GRAVY (calculated)
-0.611
Length
221 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIQTQLNYN ASNVINQIVM DELYMNNNNQ QHALFNQQSF LDALMEKQRQ EIDQFIRTQS ERLRYALREQ RRQETETLLR QMEAKALVLM TRKEEEMSRA
101: LSKNMELEDL LRRMEAENQT WQRMARENEA TVATLSSTLE QVKERAVTWH NNEGSCCGGG DDSVPGKRMS GSCLNCGSNG ETRVLFLPCR HLCCCTECEA
201: GLIVCPICSS PKKNRIEAIT F
101: LSKNMELEDL LRRMEAENQT WQRMARENEA TVATLSSTLE QVKERAVTWH NNEGSCCGGG DDSVPGKRMS GSCLNCGSNG ETRVLFLPCR HLCCCTECEA
201: GLIVCPICSS PKKNRIEAIT F
001: MAIQAQLNYN APNANQIGFG GSEFSLINNN GVIGIGNDQS YLVNNLQLQK DFNQHALFHH QHHQQQQSPS QSFLAAQMEK QKQEIDQFIK IQNERLRYVL
101: QEQRKREMEM ILRKMESKAL LLMSQKEEEM SKALNKNMEL EDLLRKMEME NQTWQRMARE NEAIVQTLNT TLEQVRERAA TCYDAGEAEV EDEGSFCGGE
201: GDGNSLPAKK MKMSSCCCNC GSNGVTRVLF LPCRHLCCCM DCEEGLLLCP ICNTPKKSRI EALIF
101: QEQRKREMEM ILRKMESKAL LLMSQKEEEM SKALNKNMEL EDLLRKMEME NQTWQRMARE NEAIVQTLNT TLEQVRERAA TCYDAGEAEV EDEGSFCGGE
201: GDGNSLPAKK MKMSSCCCNC GSNGVTRVLF LPCRHLCCCM DCEEGLLLCP ICNTPKKSRI EALIF
Arabidopsis Description
At4g35070 [Source:UniProtKB/TrEMBL;Acc:Q66GR4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.