CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, plastid

Predictor Summary:

nucleus 4
plastid 4
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH51394	Soybean	nucleus	83.56	85.02
VIT_03s0038g02450.t01	Wine grape	nucleus	40.41	54.63
PGSC0003DMT400015829	Potato	nucleus	38.36	44.44
Solyc01g111610.2.1	Tomato	cytosol	35.96	43.21
PGSC0003DMT400068728	Potato	mitochondrion, nucleus	37.67	41.67
Solyc10g055560.1.1	Tomato	nucleus	36.99	40.0
KRH24321	Soybean	cytosol	39.38	39.93
Bra011582.1-P	Field mustard	cytosol, nucleus, plastid	29.11	38.46
CDY52651	Canola	cytosol	29.11	38.46
CDX69109	Canola	nucleus	26.71	38.05
KRH29000	Soybean	cytosol	37.33	37.98
CDY40647	Canola	cytosol	30.14	37.45
KRG94235	Soybean	cytosol	31.51	37.1
Bra017691.1-P	Field mustard	cytosol, extracellular, nucleus	29.79	37.02
CDX72513	Canola	cytosol	29.45	36.75
CDY15019	Canola	cytosol	30.48	35.46
Bra034672.1-P	Field mustard	cytosol	30.48	35.46
CDX73168	Canola	cytosol	30.48	35.46
CDY17506	Canola	cytosol, nucleus, plastid	30.14	34.78
CDX76311	Canola	cytosol	30.14	34.78
AT4G35070.1	Thale cress	cytosol	31.51	34.72
KRH43767	Soybean	nucleus	21.23	24.51
KRH50476	Soybean	cytosol, nucleus, plastid	25.0	22.81
KRH77271	Soybean	plastid	25.0	22.67
KRG89416	Soybean	nucleus	24.32	22.61
KRH28216	Soybean	nucleus	25.0	22.19
KRH11729	Soybean	nucleus	23.29	21.73
KRH57556	Soybean	nucleus	26.03	21.71
KRH36722	Soybean	nucleus	22.95	21.61
KRH04275	Soybean	nucleus	26.03	21.29
KRH74575	Soybean	cytosol	23.63	20.47
KRH13682	Soybean	nucleus	23.63	20.47
KRH69583	Soybean	nucleus	22.6	19.58
KRH05668	Soybean	nucleus	19.18	16.37
KRH15376	Soybean	nucleus, plastid	19.52	16.24

Protein Annotations

EMBL:ACUP02002135	EnsemblPlants:KRH60696	EnsemblPlantsGene:GLYMA_04G003600	EntrezGene:100776899	Gene3D:1.10.1170.10	Gene3D:1.10.533.10
Gene3D:1.10.8.10	InterPro:E3ligase_BOI_like	PANTHER:PTHR42647	PANTHER:PTHR42647:SF6	PIRSF:PIRSF036836	ProteinID:KRH60696
ProteinID:KRH60696.1	SEG:seg	UniParc:UPI000233A963	UniProt:I1JSD9	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr4:-:294705..296341

Molecular Weight (calculated)

33287.6 Da

IEP (calculated)

6.992

GRAVY (calculated)

-0.680

Length

292 amino acids

Sequence
(BLAST)

001: MAIEAQLYPN NAPPFPFHVS RVDKSPAAYS HSHRQQQPGG WQMNQNIPLV PPNFSCFSNS NSNSNSNVLQ NAFNKNVVQP SASYPQCLAI EFDQQREIDH
101: HIRSHNEKLR ILLQEQRKQH VAELLKKVES NALHLLRQKD EEIAQATKKS TELKEFMTRL EVENQSWRKV AEENEAMVLS LHNTLEDMKE RALYRVTKED
201: AESCCDENMR NRAMEEGTGE NRLCGGGGAG GVEEVEQIRK RTMDCKCCNS QNSCFMFLPC RHLCSCKTCE PFLQVCPVCS MPKKSSIETL IV

Best Arabidopsis Sequence Match ( AT4G35070.1 )
(BLAST)

001: MAIQAQLNYN APNANQIGFG GSEFSLINNN GVIGIGNDQS YLVNNLQLQK DFNQHALFHH QHHQQQQSPS QSFLAAQMEK QKQEIDQFIK IQNERLRYVL
101: QEQRKREMEM ILRKMESKAL LLMSQKEEEM SKALNKNMEL EDLLRKMEME NQTWQRMARE NEAIVQTLNT TLEQVRERAA TCYDAGEAEV EDEGSFCGGE
201: GDGNSLPAKK MKMSSCCCNC GSNGVTRVLF LPCRHLCCCM DCEEGLLLCP ICNTPKKSRI EALIF

Arabidopsis Description

At4g35070 [Source:UniProtKB/TrEMBL;Acc:Q66GR4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.