Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH43767 | Soybean | nucleus | 67.36 | 89.72 |
| VIT_19s0027g00740.t01 | Wine grape | nucleus | 50.45 | 55.02 |
| KRH36722 | Soybean | nucleus | 43.32 | 47.1 |
| KRH11729 | Soybean | nucleus | 43.62 | 46.96 |
| CDX88507 | Canola | nucleus | 41.25 | 46.64 |
| Bra035092.1-P | Field mustard | nucleus | 43.62 | 46.52 |
| CDX87407 | Canola | nucleus | 43.62 | 46.52 |
| GSMUA_Achr5P02100_001 | Banana | plastid | 32.94 | 45.49 |
| GSMUA_Achr4P32070_001 | Banana | nucleus | 37.98 | 44.76 |
| CDX79294 | Canola | nucleus | 40.36 | 44.74 |
| GSMUA_Achr2P13160_001 | Banana | plastid | 32.64 | 44.53 |
| AT3G12920.1 | Thale cress | nucleus | 44.21 | 44.48 |
| GSMUA_Achr7P00850_001 | Banana | plastid | 30.27 | 44.35 |
| CDY43390 | Canola | cytosol | 42.73 | 44.31 |
| Bra039354.1-P | Field mustard | cytosol | 42.73 | 44.31 |
| GSMUA_Achr4P23050_001 | Banana | nucleus | 24.63 | 44.15 |
| CDY24237 | Canola | nucleus | 42.43 | 44.14 |
| AT1G79110.1 | Thale cress | nucleus | 45.7 | 43.02 |
| KRG89416 | Soybean | nucleus | 39.76 | 42.68 |
| CDY64561 | Canola | nucleus | 43.03 | 42.65 |
| Bra001477.1-P | Field mustard | nucleus | 42.43 | 42.06 |
| KRH50476 | Soybean | cytosol, nucleus, plastid | 39.76 | 41.88 |
| Bra034718.1-P | Field mustard | nucleus | 41.84 | 41.84 |
| GSMUA_Achr6P31690_001 | Banana | nucleus | 36.8 | 41.61 |
| CDX82568 | Canola | nucleus | 41.84 | 41.47 |
| GSMUA_Achr4P28300_001 | Banana | nucleus | 28.78 | 40.25 |
| GSMUA_Achr9P09830_001 | Banana | nucleus | 35.31 | 37.07 |
| CDY23552 | Canola | cytosol | 23.74 | 36.87 |
| TraesCS3D01G441300.1 | Wheat | mitochondrion | 28.78 | 33.45 |
| TraesCS3A01G448500.1 | Wheat | mitochondrion | 28.78 | 33.11 |
| TraesCS3D01G441000.1 | Wheat | mitochondrion | 28.19 | 32.76 |
| TraesCS3B01G484600.1 | Wheat | cytosol | 26.71 | 32.73 |
| TraesCS7D01G431300.1 | Wheat | mitochondrion | 29.97 | 32.27 |
| TraesCS6A01G079900.1 | Wheat | cytosol, mitochondrion, plastid | 22.85 | 32.22 |
| HORVU4Hr1G003180.3 | Barley | mitochondrion | 29.08 | 31.92 |
| TraesCS4D01G018100.1 | Wheat | mitochondrion, nucleus | 28.19 | 31.35 |
| HORVU7Hr1G100540.2 | Barley | mitochondrion | 28.19 | 31.25 |
| TraesCS4B01G019600.1 | Wheat | mitochondrion | 28.49 | 30.97 |
| HORVU7Hr1G100520.1 | Barley | cytosol, mitochondrion | 28.19 | 30.94 |
| TraesCS7A01G442300.1 | Wheat | mitochondrion | 29.08 | 30.91 |
| TraesCS4A01G293700.1 | Wheat | mitochondrion | 27.89 | 30.52 |
| TraesCS7B01G340600.1 | Wheat | mitochondrion | 28.19 | 30.45 |
| Zm00001d013571_P001 | Maize | cytosol, nucleus, plastid | 29.67 | 30.3 |
| TraesCS7B01G340500.1 | Wheat | mitochondrion | 28.19 | 30.16 |
| TraesCS7B01G340700.1 | Wheat | mitochondrion | 27.89 | 30.13 |
| TraesCS7A01G442100.1 | Wheat | mitochondrion | 27.89 | 29.94 |
| TraesCS6D01G073600.1 | Wheat | cytosol, nucleus, plastid | 23.44 | 29.15 |
| TraesCS7A01G441900.1 | Wheat | mitochondrion | 27.3 | 29.11 |
| EER91098 | Sorghum | nucleus | 30.56 | 29.01 |
| TraesCS7D01G431100.1 | Wheat | mitochondrion, nucleus | 27.0 | 28.98 |
| TraesCS7D01G431200.1 | Wheat | mitochondrion | 26.41 | 28.9 |
| HORVU6Hr1G021960.1 | Barley | plastid | 22.26 | 28.74 |
| HORVU6Hr1G021880.1 | Barley | plastid | 22.26 | 28.74 |
| KRH77271 | Soybean | plastid | 26.41 | 27.64 |
| TraesCS6B01G149100.1 | Wheat | nucleus | 21.36 | 27.38 |
| TraesCS6D01G110700.1 | Wheat | nucleus | 21.07 | 27.0 |
| TraesCS6A01G120700.1 | Wheat | nucleus | 20.77 | 26.62 |
| KRH28216 | Soybean | nucleus | 25.82 | 26.44 |
| KRH57556 | Soybean | nucleus | 26.11 | 25.14 |
| Zm00001d033419_P001 | Maize | plastid | 20.77 | 25.0 |
| KRH04275 | Soybean | nucleus | 25.52 | 24.09 |
| KRH51394 | Soybean | nucleus | 20.47 | 24.04 |
| KRH60696 | Soybean | nucleus, plastid | 20.47 | 23.63 |
| KRH69583 | Soybean | nucleus | 21.96 | 21.96 |
| KRH24321 | Soybean | cytosol | 18.4 | 21.53 |
| KRH74575 | Soybean | cytosol | 21.36 | 21.36 |
| KRH29000 | Soybean | cytosol | 18.1 | 21.25 |
| KRH15376 | Soybean | nucleus, plastid | 21.66 | 20.8 |
| KRG94235 | Soybean | cytosol | 15.13 | 20.56 |
| KRH05668 | Soybean | nucleus | 20.77 | 20.47 |
Protein Annotations
| EMBL:ACUP02009772 | EnsemblPlants:KRH13682 | EnsemblPlantsGene:GLYMA_15G256500 | EntrezGene:100787292 | Gene3D:3.30.40.10 | InterPro:E3ligase_BOI_like |
| InterPro:IPR001841 | InterPro:IPR013083 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR42647 | PANTHER:PTHR42647:SF7 |
| PFAM:PF13920 | PFscan:PS50089 | PIRSF:PIRSF036836 | ProteinID:KRH13682 | ProteinID:KRH13682.1 | SEG:seg |
| UniParc:UPI000233BCF7 | UniProt:I1MJ79 | MapMan:35.1 | : | : | : |
Description
hypothetical protein
Coordinates
chr15:+:48585830..48587682
Molecular Weight (calculated)
37209.2 Da
IEP (calculated)
6.393
GRAVY (calculated)
-0.529
Length
337 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVEARHLNL FPSQLITNRQ VMDSGEANMM NMYNNSTPIG GYSSFLPLSG AVTETALPSS VFNHSLANAV KSESGVTYNN NNNNNNVSVS PMSRKRSRDN
101: NNNYGYNNNN NDSFSFLGQD VSLQIQQQQL DIEHLIMQRM EKVRMEIDEK RKRQARRIIE AIEVGVMKKL KTKEEEIEKI GKLNWALEEK VKHLCMENQV
201: WRNIAETNEA TANALRCNLE QVLAQRGGMA AEEDVGGGAT VCGGAEMDDA ESCCGSTEED GLEKETGGWR TLAGCAGVKD KEGGGNGRLC RNCRKEESCV
301: LILPCRHLCL CTVCGSSLHI CPICKSYKTA SVHVNMS
101: NNNYGYNNNN NDSFSFLGQD VSLQIQQQQL DIEHLIMQRM EKVRMEIDEK RKRQARRIIE AIEVGVMKKL KTKEEEIEKI GKLNWALEEK VKHLCMENQV
201: WRNIAETNEA TANALRCNLE QVLAQRGGMA AEEDVGGGAT VCGGAEMDDA ESCCGSTEED GLEKETGGWR TLAGCAGVKD KEGGGNGRLC RNCRKEESCV
301: LILPCRHLCL CTVCGSSLHI CPICKSYKTA SVHVNMS
001: MAVEAHHLNP LFSSNREMIH PVEASGVVYN TQMRYGTVPT FNPTVECQTS LFNPIYNISP VDRLVHQSMK PTIQSVDSSL TFNSDNNVDF LRPVSSRKRS
101: REESVVLNPS AYMQIQKNPT DPLMFLGQDL SSNVQQHHFD IDRLISNHVE RMRMEIEEKR KTQGRRIVEA VEQGLMKTLR AKDDEINHIG KLNLFLEEKV
201: KSLCVENQIW RDVAQSNEAT VNALRSNLQQ VLAAVERNRW EEPPTVADDA QSCCGSNDEG DSEEERWKLA GEAQDTKKMC RVGMSMCRSC GKGEASVLLL
301: PCRHMCLCSV CGSSLNTCPI CKSPKTASLH VNLSS
101: REESVVLNPS AYMQIQKNPT DPLMFLGQDL SSNVQQHHFD IDRLISNHVE RMRMEIEEKR KTQGRRIVEA VEQGLMKTLR AKDDEINHIG KLNLFLEEKV
201: KSLCVENQIW RDVAQSNEAT VNALRSNLQQ VLAAVERNRW EEPPTVADDA QSCCGSNDEG DSEEERWKLA GEAQDTKKMC RVGMSMCRSC GKGEASVLLL
301: PCRHMCLCSV CGSSLNTCPI CKSPKTASLH VNLSS
Arabidopsis Description
BRG3Probable BOI-related E3 ubiquitin-protein ligase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDD1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.