Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001477.1-P | Field mustard | nucleus | 97.94 | 97.94 |
| CDY64561 | Canola | nucleus | 95.0 | 95.0 |
| CDY43390 | Canola | cytosol | 76.76 | 80.31 |
| CDY24237 | Canola | nucleus | 74.41 | 78.09 |
| AT3G12920.1 | Thale cress | nucleus | 76.76 | 77.91 |
| CDY23552 | Canola | cytosol | 47.35 | 74.19 |
| KRH43767 | Soybean | nucleus | 34.41 | 46.25 |
| VIT_19s0027g00740.t01 | Wine grape | nucleus | 40.59 | 44.66 |
| GSMUA_Achr7P00850_001 | Banana | plastid | 30.0 | 44.35 |
| CDX87407 | Canola | nucleus | 40.88 | 43.99 |
| CDX88507 | Canola | nucleus | 38.24 | 43.62 |
| CDX79294 | Canola | nucleus | 37.65 | 42.11 |
| KRH13682 | Soybean | nucleus | 41.47 | 41.84 |
| GSMUA_Achr2P13160_001 | Banana | plastid | 30.29 | 41.7 |
| GSMUA_Achr5P02100_001 | Banana | plastid | 29.71 | 41.39 |
| GSMUA_Achr4P32070_001 | Banana | nucleus | 34.41 | 40.91 |
| CDX94520 | Canola | cytosol | 27.94 | 40.6 |
| CDY21311 | Canola | cytosol | 27.94 | 40.6 |
| CDY07541 | Canola | cytosol | 27.94 | 40.6 |
| CDY09318 | Canola | cytosol | 27.94 | 40.6 |
| CDY34127 | Canola | extracellular | 7.06 | 40.0 |
| GSMUA_Achr4P23050_001 | Banana | nucleus | 21.47 | 38.83 |
| CDY01615 | Canola | cytosol | 34.12 | 38.03 |
| CDY71607 | Canola | cytosol | 34.12 | 37.91 |
| GSMUA_Achr4P28300_001 | Banana | nucleus | 26.76 | 37.76 |
| CDY51918 | Canola | cytosol | 31.47 | 37.28 |
| CDY26402 | Canola | cytosol | 32.35 | 37.16 |
| GSMUA_Achr6P31690_001 | Banana | nucleus | 32.35 | 36.91 |
| GSMUA_Achr9P09830_001 | Banana | nucleus | 32.35 | 34.27 |
| CDY18062 | Canola | cytosol | 28.24 | 34.04 |
| CDY71192 | Canola | cytosol | 27.94 | 33.93 |
| CDY46345 | Canola | cytosol | 27.35 | 32.98 |
| CDY13070 | Canola | cytosol | 27.06 | 32.97 |
| TraesCS7D01G431300.1 | Wheat | mitochondrion | 29.71 | 32.27 |
| TraesCS3D01G441300.1 | Wheat | mitochondrion | 27.35 | 32.07 |
| Zm00001d013571_P001 | Maize | cytosol, nucleus, plastid | 30.88 | 31.82 |
| TraesCS3D01G441000.1 | Wheat | mitochondrion | 27.06 | 31.72 |
| TraesCS4D01G018100.1 | Wheat | mitochondrion, nucleus | 28.24 | 31.68 |
| HORVU4Hr1G003180.3 | Barley | mitochondrion | 28.53 | 31.6 |
| TraesCS3B01G484600.1 | Wheat | cytosol | 25.29 | 31.27 |
| HORVU7Hr1G100520.1 | Barley | cytosol, mitochondrion | 27.94 | 30.94 |
| TraesCS3A01G448500.1 | Wheat | mitochondrion | 26.47 | 30.72 |
| EER91098 | Sorghum | nucleus | 31.47 | 30.14 |
| TraesCS4B01G019600.1 | Wheat | mitochondrion | 27.35 | 30.0 |
| TraesCS7A01G442300.1 | Wheat | mitochondrion | 27.94 | 29.97 |
| TraesCS7A01G442100.1 | Wheat | mitochondrion | 27.65 | 29.94 |
| HORVU7Hr1G100540.2 | Barley | mitochondrion | 26.76 | 29.93 |
| TraesCS4A01G293700.1 | Wheat | mitochondrion | 27.06 | 29.87 |
| TraesCS7B01G340700.1 | Wheat | mitochondrion | 27.06 | 29.49 |
| TraesCS7B01G340600.1 | Wheat | mitochondrion | 26.76 | 29.17 |
| TraesCS6A01G079900.1 | Wheat | cytosol, mitochondrion, plastid | 20.29 | 28.87 |
| TraesCS7B01G340500.1 | Wheat | mitochondrion | 26.18 | 28.25 |
| TraesCS6D01G073600.1 | Wheat | cytosol, nucleus, plastid | 22.35 | 28.04 |
| TraesCS7D01G431100.1 | Wheat | mitochondrion, nucleus | 25.59 | 27.71 |
| TraesCS7D01G431200.1 | Wheat | mitochondrion | 25.0 | 27.6 |
| HORVU6Hr1G021880.1 | Barley | plastid | 21.18 | 27.59 |
| HORVU6Hr1G021960.1 | Barley | plastid | 21.18 | 27.59 |
| CDX69109 | Canola | nucleus | 16.47 | 27.32 |
| TraesCS6A01G120700.1 | Wheat | nucleus | 20.88 | 27.0 |
| TraesCS7A01G441900.1 | Wheat | mitochondrion | 25.0 | 26.9 |
| TraesCS6B01G149100.1 | Wheat | nucleus | 20.59 | 26.62 |
| TraesCS6D01G110700.1 | Wheat | nucleus | 20.59 | 26.62 |
| Zm00001d033419_P001 | Maize | plastid | 21.47 | 26.07 |
| CDY52651 | Canola | cytosol | 16.76 | 25.79 |
| CDX72513 | Canola | cytosol | 17.65 | 25.64 |
| CDY40647 | Canola | cytosol | 17.65 | 25.53 |
| CDX76311 | Canola | cytosol | 17.94 | 24.11 |
| CDX73168 | Canola | cytosol | 17.65 | 23.9 |
| CDY15019 | Canola | cytosol | 17.65 | 23.9 |
| CDY17506 | Canola | cytosol, nucleus, plastid | 17.65 | 23.72 |
| CDY17103 | Canola | cytosol | 20.29 | 23.31 |
| CDY17048 | Canola | cytosol | 21.18 | 23.15 |
| CDY51856 | Canola | cytosol | 20.59 | 23.1 |
| CDY40841 | Canola | cytosol | 20.29 | 23.08 |
| CDY37172 | Canola | cytosol | 20.29 | 22.85 |
| CDY33511 | Canola | nucleus | 20.29 | 22.77 |
| CDY06767 | Canola | cytosol | 20.29 | 22.7 |
| CDX77733 | Canola | nucleus | 20.0 | 22.67 |
| CDY24542 | Canola | nucleus | 21.47 | 22.32 |
| CDX93396 | Canola | cytosol | 22.06 | 22.32 |
| CDY43447 | Canola | nucleus | 19.71 | 22.19 |
| CDY37958 | Canola | cytosol, plastid | 21.47 | 21.53 |
| CDY20963 | Canola | nucleus | 21.18 | 21.3 |
| CDY03162 | Canola | cytosol | 20.0 | 21.12 |
| CDY20611 | Canola | nucleus | 21.18 | 21.11 |
| CDX90458 | Canola | cytosol | 18.53 | 20.72 |
| CDY09609 | Canola | cytosol | 14.12 | 19.43 |
Protein Annotations
| EnsemblPlants:CDX82568 | EnsemblPlantsGene:GSBRNA2T00137739001 | Gene3D:3.30.40.10 | GO:A0A078D5R2 | InterPro:E3ligase_BOI_like | InterPro:IPR001841 |
| InterPro:IPR013083 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | KEGG:00220+6.3.2.- | KEGG:00261+6.3.2.- | KEGG:00380+6.3.2.- |
| PANTHER:PTHR42647 | PANTHER:PTHR42647:SF7 | PFAM:PF13920 | PFscan:PS50089 | PIRSF:PIRSF036836 | ProteinID:CDX82568 |
| ProteinID:CDX82568.1 | SEG:seg | UniParc:UPI0004EE445E | UniPathway:UPA00144 | MapMan:35.1 | : |
Description
BnaA03g32530D
Coordinates
chrLK031828:+:1981823..1983290
Molecular Weight (calculated)
38195.3 Da
IEP (calculated)
6.769
GRAVY (calculated)
-0.509
Length
340 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVEAHYLNP LCSPNVAGDF LYRDMMHPLE ANSFVYNNQI RYGNVPAATT PFNPTAECQT SLLNPTYNIS PVDYLVHQSI KPTIHSVDSS VTFHSENNGN
101: NVDFLRHGSS SSLRKRRREE SVLVSPMPSQ KRCTDPLMFL GQDLSSNVQH HSFDIDRLIS NHVEIMRLEI EEKRRTQGRK IMEAIQQGLM KTLRAKDEEI
201: NHIQKLNLYL EEKVKSLCVE NQVWRDVAQS NEATVNALRS NLQQVLADVE RREEPTAADD TQSCCGSNDE GDSKEKWRLV GEAQDTITRT MCRSCGKGEA
301: SVLLLPCRHM CLCTVCGSSV NTCPVCKSPK NASLHVNLSS
101: NVDFLRHGSS SSLRKRRREE SVLVSPMPSQ KRCTDPLMFL GQDLSSNVQH HSFDIDRLIS NHVEIMRLEI EEKRRTQGRK IMEAIQQGLM KTLRAKDEEI
201: NHIQKLNLYL EEKVKSLCVE NQVWRDVAQS NEATVNALRS NLQQVLADVE RREEPTAADD TQSCCGSNDE GDSKEKWRLV GEAQDTITRT MCRSCGKGEA
301: SVLLLPCRHM CLCTVCGSSV NTCPVCKSPK NASLHVNLSS
001: MAVEAHHLNP LFSSNREMIH PVEASGVVYN TQMRYGTVPT FNPTVECQTS LFNPIYNISP VDRLVHQSMK PTIQSVDSSL TFNSDNNVDF LRPVSSRKRS
101: REESVVLNPS AYMQIQKNPT DPLMFLGQDL SSNVQQHHFD IDRLISNHVE RMRMEIEEKR KTQGRRIVEA VEQGLMKTLR AKDDEINHIG KLNLFLEEKV
201: KSLCVENQIW RDVAQSNEAT VNALRSNLQQ VLAAVERNRW EEPPTVADDA QSCCGSNDEG DSEEERWKLA GEAQDTKKMC RVGMSMCRSC GKGEASVLLL
301: PCRHMCLCSV CGSSLNTCPI CKSPKTASLH VNLSS
101: REESVVLNPS AYMQIQKNPT DPLMFLGQDL SSNVQQHHFD IDRLISNHVE RMRMEIEEKR KTQGRRIVEA VEQGLMKTLR AKDDEINHIG KLNLFLEEKV
201: KSLCVENQIW RDVAQSNEAT VNALRSNLQQ VLAAVERNRW EEPPTVADDA QSCCGSNDEG DSEEERWKLA GEAQDTKKMC RVGMSMCRSC GKGEASVLLL
301: PCRHMCLCSV CGSSLNTCPI CKSPKTASLH VNLSS
Arabidopsis Description
BRG3Probable BOI-related E3 ubiquitin-protein ligase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDD1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.