Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY13070 | Canola | cytosol | 98.21 | 98.57 |
| CDY46345 | Canola | cytosol | 88.93 | 88.3 |
| CDY18062 | Canola | cytosol | 87.14 | 86.52 |
| CDY26402 | Canola | cytosol | 67.86 | 64.19 |
| AT5G45100.1 | Thale cress | cytosol | 66.07 | 62.93 |
| CDX94520 | Canola | cytosol | 48.93 | 58.55 |
| CDY21311 | Canola | cytosol | 48.93 | 58.55 |
| CDY07541 | Canola | cytosol | 48.93 | 58.55 |
| CDY09318 | Canola | cytosol | 48.93 | 58.55 |
| CDY01615 | Canola | cytosol | 60.36 | 55.41 |
| CDY51918 | Canola | cytosol | 56.43 | 55.05 |
| CDY71607 | Canola | cytosol | 60.0 | 54.9 |
| KRH36722 | Soybean | nucleus | 43.21 | 39.03 |
| KRH11729 | Soybean | nucleus | 43.57 | 38.98 |
| PGSC0003DMT400062617 | Potato | nucleus | 41.07 | 38.33 |
| CDY34127 | Canola | extracellular | 8.21 | 38.33 |
| VIT_10s0042g01070.t01 | Wine grape | nucleus | 41.43 | 38.28 |
| GSMUA_Achr7P00850_001 | Banana | plastid | 30.71 | 37.39 |
| GSMUA_Achr4P23050_001 | Banana | nucleus | 25.0 | 37.23 |
| GSMUA_Achr2P13160_001 | Banana | plastid | 32.5 | 36.84 |
| Solyc02g031710.2.1 | Tomato | nucleus | 40.36 | 36.45 |
| PGSC0003DMT400026783 | Potato | cytosol, mitochondrion, nucleus, plastid, vacuole | 41.79 | 36.22 |
| KRG89416 | Soybean | nucleus | 40.0 | 35.67 |
| GSMUA_Achr5P02100_001 | Banana | plastid | 31.07 | 35.66 |
| KRH50476 | Soybean | cytosol, nucleus, plastid | 40.36 | 35.31 |
| CDX88507 | Canola | nucleus | 37.14 | 34.9 |
| GSMUA_Achr4P28300_001 | Banana | nucleus | 30.0 | 34.85 |
| CDX87407 | Canola | nucleus | 37.5 | 33.23 |
| GSMUA_Achr4P32070_001 | Banana | nucleus | 33.57 | 32.87 |
| CDX79294 | Canola | nucleus | 33.93 | 31.25 |
| Solyc02g069180.2.1 | Tomato | plastid | 30.0 | 29.68 |
| TraesCS3B01G484600.1 | Wheat | cytosol | 28.93 | 29.45 |
| CDY64561 | Canola | nucleus | 35.36 | 29.12 |
| TraesCS3D01G441300.1 | Wheat | mitochondrion | 29.29 | 28.28 |
| GSMUA_Achr6P31690_001 | Banana | nucleus | 30.0 | 28.19 |
| GSMUA_Achr9P09830_001 | Banana | nucleus | 32.14 | 28.04 |
| TraesCS3A01G448500.1 | Wheat | mitochondrion | 29.29 | 27.99 |
| CDX82568 | Canola | nucleus | 33.93 | 27.94 |
| TraesCS3D01G441000.1 | Wheat | mitochondrion | 28.93 | 27.93 |
| TraesCS7D01G431300.1 | Wheat | mitochondrion | 31.07 | 27.8 |
| CDY43390 | Canola | cytosol | 31.79 | 27.38 |
| HORVU4Hr1G003180.3 | Barley | mitochondrion | 30.0 | 27.36 |
| TraesCS6A01G079900.1 | Wheat | cytosol, mitochondrion, plastid | 23.21 | 27.2 |
| CDY24237 | Canola | nucleus | 31.43 | 27.16 |
| TraesCS7B01G340700.1 | Wheat | mitochondrion | 30.0 | 26.92 |
| TraesCS7A01G442300.1 | Wheat | mitochondrion | 30.36 | 26.81 |
| TraesCS4B01G019600.1 | Wheat | mitochondrion | 29.64 | 26.77 |
| TraesCS7A01G442100.1 | Wheat | mitochondrion | 30.0 | 26.75 |
| TraesCS4D01G018100.1 | Wheat | mitochondrion, nucleus | 28.93 | 26.73 |
| TraesCS7A01G441900.1 | Wheat | mitochondrion | 30.0 | 26.58 |
| HORVU6Hr1G021880.1 | Barley | plastid | 24.64 | 26.44 |
| HORVU6Hr1G021960.1 | Barley | plastid | 24.64 | 26.44 |
| TraesCS7B01G340500.1 | Wheat | mitochondrion | 29.64 | 26.35 |
| TraesCS6D01G110700.1 | Wheat | nucleus | 24.29 | 25.86 |
| HORVU7Hr1G100540.2 | Barley | mitochondrion | 27.86 | 25.66 |
| TraesCS7B01G340600.1 | Wheat | mitochondrion | 28.57 | 25.64 |
| EER91098 | Sorghum | nucleus | 32.5 | 25.63 |
| HORVU7Hr1G100520.1 | Barley | cytosol, mitochondrion | 27.86 | 25.41 |
| CDX69109 | Canola | nucleus | 18.57 | 25.37 |
| TraesCS7D01G431200.1 | Wheat | mitochondrion | 27.86 | 25.32 |
| TraesCS4A01G293700.1 | Wheat | mitochondrion | 27.86 | 25.32 |
| TraesCS6B01G149100.1 | Wheat | nucleus | 23.57 | 25.1 |
| Zm00001d013571_P001 | Maize | cytosol, nucleus, plastid | 29.29 | 24.85 |
| TraesCS6D01G073600.1 | Wheat | cytosol, nucleus, plastid | 23.57 | 24.35 |
| TraesCS7D01G431100.1 | Wheat | mitochondrion, nucleus | 27.14 | 24.2 |
| TraesCS6A01G120700.1 | Wheat | nucleus | 22.5 | 23.95 |
| CDY52651 | Canola | cytosol | 18.21 | 23.08 |
| CDX72513 | Canola | cytosol | 18.21 | 21.79 |
| CDY40647 | Canola | cytosol | 17.86 | 21.28 |
| CDX73168 | Canola | cytosol | 18.93 | 21.12 |
| CDY15019 | Canola | cytosol | 18.93 | 21.12 |
| CDX76311 | Canola | cytosol | 18.93 | 20.95 |
| CDY17506 | Canola | cytosol, nucleus, plastid | 18.93 | 20.95 |
| Zm00001d033419_P001 | Maize | plastid | 20.36 | 20.36 |
| CDY24542 | Canola | nucleus | 23.21 | 19.88 |
| CDY09609 | Canola | cytosol | 17.14 | 19.43 |
| CDX77733 | Canola | nucleus | 20.71 | 19.33 |
| CDY51856 | Canola | cytosol | 20.71 | 19.14 |
| CDY33511 | Canola | nucleus | 20.71 | 19.14 |
| CDY37172 | Canola | cytosol | 20.0 | 18.54 |
| CDY20963 | Canola | nucleus | 22.14 | 18.34 |
| CDY17103 | Canola | cytosol | 19.29 | 18.24 |
| CDY20611 | Canola | nucleus | 22.14 | 18.18 |
| CDX93396 | Canola | cytosol | 21.79 | 18.15 |
| CDX90458 | Canola | cytosol | 19.64 | 18.09 |
| CDY43447 | Canola | nucleus | 19.29 | 17.88 |
| CDY40841 | Canola | cytosol | 18.93 | 17.73 |
| CDY37958 | Canola | cytosol, plastid | 21.43 | 17.7 |
| CDY23552 | Canola | cytosol | 13.57 | 17.51 |
| CDY03162 | Canola | cytosol | 20.0 | 17.39 |
| CDY17048 | Canola | cytosol | 19.29 | 17.36 |
| CDY06767 | Canola | cytosol | 18.21 | 16.78 |
Protein Annotations
| EnsemblPlants:CDY71192 | EnsemblPlantsGene:GSBRNA2T00011965001 | Gene3D:3.30.40.10 | GO:A0A078JZW0 | InterPro:E3ligase_BOI_like | InterPro:IPR001841 |
| InterPro:IPR013083 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR42647 | PANTHER:PTHR42647:SF12 | PFAM:PF13920 |
| PFscan:PS50089 | PIRSF:PIRSF036836 | ProteinID:CDY71192 | ProteinID:CDY71192.1 | SUPFAM:SSF57850 | UniParc:UPI0004EBF529 |
| UniProt:A0A078JZW0 | MapMan:35.1 | : | : | : | : |
Description
BnaCnng71790DBnaCnng71790D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JZW0]
Coordinates
chrLK044861:+:1325..2167
Molecular Weight (calculated)
30962.0 Da
IEP (calculated)
6.023
GRAVY (calculated)
-0.211
Length
280 amino acids
Sequence
(BLAST)
(BLAST)
001: MNNQIIADDF PVTLGDRQLQ YMQSRAIDLI QTAPSFNKYH FNQSPVMLKR QRDYAFDSDA LMTARKRRSV AFVPPQSLIE AQLVSQIQQQ QTDIDLFVAQ
101: QTQTLRLELE ARQRTQTLSL VSAVQSVIVK KLKQRDDEIV RMGKLNYVLQ ERVKSLYVEN QILRDLAQTN EATANTLRSN LEHVLAQVDE LPATAATGGD
201: VFHPPLEEDA VSSCGSCDGA DGNDFTAGTG GCKRCGERTA SVLVLPCRHL CLCTVCGSAL LQACPVCDTV MNASVHVNMS
101: QTQTLRLELE ARQRTQTLSL VSAVQSVIVK KLKQRDDEIV RMGKLNYVLQ ERVKSLYVEN QILRDLAQTN EATANTLRSN LEHVLAQVDE LPATAATGGD
201: VFHPPLEEDA VSSCGSCDGA DGNDFTAGTG GCKRCGERTA SVLVLPCRHL CLCTVCGSAL LQACPVCDTV MNASVHVNMS
001: MAVEARHMNL FSSQYITNRE CVKSQTNMNN GQQIAGGGFP VTIGDRNLQY IDPINSFNKS ESELTAISKR QRDSTFDSDA LIASQKRRAI AFSPASLIDA
101: ELVSQIQQQN SEIDRFVAQQ TETLRIELEA RQRTQTRMLA SAVQNAILKK LKAKDEEIIR MGKLNWVLQE RVKNLYVENQ IWRDLAQTNE ATANNLRSNL
201: EQVLAQVDDL DAFRRPLVEE ADDAESSCGS CDGGDVTAVV NGGCKRCGEL TASVLVLPCR HLCLCTVCGS SALLRTCPVC DMVMTASVHV NMSS
101: ELVSQIQQQN SEIDRFVAQQ TETLRIELEA RQRTQTRMLA SAVQNAILKK LKAKDEEIIR MGKLNWVLQE RVKNLYVENQ IWRDLAQTNE ATANNLRSNL
201: EQVLAQVDDL DAFRRPLVEE ADDAESSCGS CDGGDVTAVV NGGCKRCGEL TASVLVLPCR HLCLCTVCGS SALLRTCPVC DMVMTASVHV NMSS
Arabidopsis Description
BRG1BOI-related E3 ubiquitin-protein ligase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHE4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.