Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039354.1-P | Field mustard | cytosol | 95.99 | 95.69 |
| CDY43390 | Canola | cytosol | 95.99 | 95.69 |
| AT3G12920.1 | Thale cress | nucleus | 80.56 | 77.91 |
| CDY23552 | Canola | cytosol | 51.85 | 77.42 |
| CDX82568 | Canola | nucleus | 78.09 | 74.41 |
| CDY64561 | Canola | nucleus | 76.54 | 72.94 |
| VIT_19s0027g00740.t01 | Wine grape | nucleus | 43.52 | 45.63 |
| KRH43767 | Soybean | nucleus | 35.19 | 45.06 |
| CDX87407 | Canola | nucleus | 43.52 | 44.62 |
| CDX88507 | Canola | nucleus | 40.43 | 43.96 |
| GSMUA_Achr7P00850_001 | Banana | plastid | 31.17 | 43.91 |
| GSMUA_Achr2P13160_001 | Banana | plastid | 32.41 | 42.51 |
| KRH13682 | Soybean | nucleus | 44.14 | 42.43 |
| GSMUA_Achr5P02100_001 | Banana | plastid | 31.48 | 41.8 |
| CDX79294 | Canola | nucleus | 39.2 | 41.78 |
| GSMUA_Achr4P32070_001 | Banana | nucleus | 36.42 | 41.26 |
| CDX94520 | Canola | cytosol | 28.09 | 38.89 |
| CDY07541 | Canola | cytosol | 28.09 | 38.89 |
| CDY09318 | Canola | cytosol | 28.09 | 38.89 |
| CDY21311 | Canola | cytosol | 28.09 | 38.89 |
| CDY34127 | Canola | extracellular | 7.1 | 38.33 |
| GSMUA_Achr4P23050_001 | Banana | nucleus | 22.22 | 38.3 |
| GSMUA_Achr4P28300_001 | Banana | nucleus | 27.47 | 36.93 |
| GSMUA_Achr6P31690_001 | Banana | nucleus | 33.95 | 36.91 |
| CDY26402 | Canola | cytosol | 33.64 | 36.82 |
| CDY51918 | Canola | cytosol | 31.48 | 35.54 |
| CDY01615 | Canola | cytosol | 33.02 | 35.08 |
| CDY71607 | Canola | cytosol | 33.02 | 34.97 |
| GSMUA_Achr9P09830_001 | Banana | nucleus | 34.26 | 34.58 |
| TraesCS3D01G441300.1 | Wheat | mitochondrion | 28.4 | 31.72 |
| TraesCS3D01G441000.1 | Wheat | mitochondrion | 28.4 | 31.72 |
| CDY71192 | Canola | cytosol | 27.16 | 31.43 |
| CDY18062 | Canola | cytosol | 27.16 | 31.21 |
| TraesCS7D01G431300.1 | Wheat | mitochondrion | 29.94 | 30.99 |
| TraesCS3B01G484600.1 | Wheat | cytosol | 26.23 | 30.91 |
| TraesCS3A01G448500.1 | Wheat | mitochondrion | 27.78 | 30.72 |
| HORVU4Hr1G003180.3 | Barley | mitochondrion | 29.01 | 30.62 |
| Zm00001d013571_P001 | Maize | cytosol, nucleus, plastid | 31.17 | 30.61 |
| CDY13070 | Canola | cytosol | 26.23 | 30.47 |
| HORVU7Hr1G100520.1 | Barley | cytosol, mitochondrion | 28.7 | 30.29 |
| CDY46345 | Canola | cytosol | 26.23 | 30.14 |
| TraesCS4D01G018100.1 | Wheat | mitochondrion, nucleus | 28.09 | 30.03 |
| TraesCS6A01G079900.1 | Wheat | cytosol, mitochondrion, plastid | 21.91 | 29.71 |
| TraesCS4B01G019600.1 | Wheat | mitochondrion | 27.78 | 29.03 |
| TraesCS7A01G442100.1 | Wheat | mitochondrion | 28.09 | 28.98 |
| HORVU7Hr1G100540.2 | Barley | mitochondrion | 27.16 | 28.95 |
| TraesCS4A01G293700.1 | Wheat | mitochondrion | 27.47 | 28.9 |
| TraesCS7B01G340700.1 | Wheat | mitochondrion | 27.78 | 28.85 |
| TraesCS7A01G442300.1 | Wheat | mitochondrion | 28.09 | 28.71 |
| TraesCS7B01G340500.1 | Wheat | mitochondrion | 27.78 | 28.57 |
| TraesCS7B01G340600.1 | Wheat | mitochondrion | 27.47 | 28.53 |
| TraesCS7A01G441900.1 | Wheat | mitochondrion | 27.78 | 28.48 |
| EER91098 | Sorghum | nucleus | 31.17 | 28.45 |
| CDX69109 | Canola | nucleus | 17.9 | 28.29 |
| CDY52651 | Canola | cytosol | 18.83 | 27.6 |
| TraesCS7D01G431100.1 | Wheat | mitochondrion, nucleus | 26.23 | 27.07 |
| TraesCS6A01G120700.1 | Wheat | nucleus | 21.91 | 27.0 |
| TraesCS7D01G431200.1 | Wheat | mitochondrion | 25.62 | 26.95 |
| TraesCS6D01G073600.1 | Wheat | cytosol, nucleus, plastid | 22.53 | 26.94 |
| HORVU6Hr1G021880.1 | Barley | plastid | 21.6 | 26.82 |
| HORVU6Hr1G021960.1 | Barley | plastid | 21.6 | 26.82 |
| TraesCS6D01G110700.1 | Wheat | nucleus | 21.6 | 26.62 |
| TraesCS6B01G149100.1 | Wheat | nucleus | 21.6 | 26.62 |
| CDX73168 | Canola | cytosol | 20.06 | 25.9 |
| CDY15019 | Canola | cytosol | 20.06 | 25.9 |
| CDX76311 | Canola | cytosol | 20.06 | 25.69 |
| CDY17506 | Canola | cytosol, nucleus, plastid | 20.06 | 25.69 |
| CDX72513 | Canola | cytosol | 18.52 | 25.64 |
| CDY40647 | Canola | cytosol | 18.52 | 25.53 |
| Zm00001d033419_P001 | Maize | plastid | 21.6 | 25.0 |
| CDY40841 | Canola | cytosol | 21.91 | 23.75 |
| CDX93396 | Canola | cytosol | 23.77 | 22.92 |
| CDY43447 | Canola | nucleus | 21.3 | 22.85 |
| CDY37172 | Canola | cytosol | 21.3 | 22.85 |
| CDY17048 | Canola | cytosol | 21.91 | 22.83 |
| CDY51856 | Canola | cytosol | 21.3 | 22.77 |
| CDY33511 | Canola | nucleus | 21.3 | 22.77 |
| CDX77733 | Canola | nucleus | 20.99 | 22.67 |
| CDY17103 | Canola | cytosol | 20.37 | 22.3 |
| CDY37958 | Canola | cytosol, plastid | 23.15 | 22.12 |
| CDY06767 | Canola | cytosol | 20.37 | 21.71 |
| CDY03162 | Canola | cytosol | 21.3 | 21.43 |
| CDY24542 | Canola | nucleus | 21.6 | 21.41 |
| CDX90458 | Canola | cytosol | 20.06 | 21.38 |
| CDY20611 | Canola | nucleus | 21.91 | 20.82 |
| CDY20963 | Canola | nucleus | 21.6 | 20.71 |
| CDY09609 | Canola | cytosol | 15.43 | 20.24 |
Protein Annotations
| KEGG:00220+6.3.2.- | KEGG:00261+6.3.2.- | KEGG:00380+6.3.2.- | Gene3D:3.30.40.10 | MapMan:35.1 | GO:A0A078GGF1 |
| UniProt:A0A078GGF1 | EnsemblPlants:CDY24237 | ProteinID:CDY24237 | ProteinID:CDY24237.1 | InterPro:E3ligase_BOI_like | EnsemblPlantsGene:GSBRNA2T00026352001 |
| InterPro:IPR001841 | InterPro:IPR013083 | PFAM:PF13920 | PIRSF:PIRSF036836 | PFscan:PS50089 | PANTHER:PTHR42647 |
| PANTHER:PTHR42647:SF7 | UniPathway:UPA00144 | UniParc:UPI0004EE2630 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | SEG:seg |
Description
BnaC01g38170DBnaC01g38170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GGF1]
Coordinates
chrLK032155:+:458713..460139
Molecular Weight (calculated)
36365.3 Da
IEP (calculated)
6.877
GRAVY (calculated)
-0.504
Length
324 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVEAHHLNP LFSSNREMMY PVEANGLVYT NQIRYNTLPA TAMPFNHTME CQTSTFNPIY NTSPVDFLVH QSKPTIHSVD SSVTHNSDNN NGNNVNYLPP
101: VSSLRKRPRE ESVVENPMPS QKRCTDPLMF LGQDLSSNVQ RHNLDIDRLI SNHVEIIRMG IEEKRKQQVR KIMEAIEQGL MKTLRAKDDE INHIGKLNLF
201: LEEKVKSLTV ENQLWRDMAQ SNEATVNSLR SNLQQVLAAV ERNRWEEPTT ADDAQSCCGS NDEGDSTMMR TVSSTMCRGC GKGEASVLLL PCRHMCLCSV
301: CGSSINTCPI CKSPKTASLH VNLS
101: VSSLRKRPRE ESVVENPMPS QKRCTDPLMF LGQDLSSNVQ RHNLDIDRLI SNHVEIIRMG IEEKRKQQVR KIMEAIEQGL MKTLRAKDDE INHIGKLNLF
201: LEEKVKSLTV ENQLWRDMAQ SNEATVNSLR SNLQQVLAAV ERNRWEEPTT ADDAQSCCGS NDEGDSTMMR TVSSTMCRGC GKGEASVLLL PCRHMCLCSV
301: CGSSINTCPI CKSPKTASLH VNLS
001: MAVEAHHLNP LFSSNREMIH PVEASGVVYN TQMRYGTVPT FNPTVECQTS LFNPIYNISP VDRLVHQSMK PTIQSVDSSL TFNSDNNVDF LRPVSSRKRS
101: REESVVLNPS AYMQIQKNPT DPLMFLGQDL SSNVQQHHFD IDRLISNHVE RMRMEIEEKR KTQGRRIVEA VEQGLMKTLR AKDDEINHIG KLNLFLEEKV
201: KSLCVENQIW RDVAQSNEAT VNALRSNLQQ VLAAVERNRW EEPPTVADDA QSCCGSNDEG DSEEERWKLA GEAQDTKKMC RVGMSMCRSC GKGEASVLLL
301: PCRHMCLCSV CGSSLNTCPI CKSPKTASLH VNLSS
101: REESVVLNPS AYMQIQKNPT DPLMFLGQDL SSNVQQHHFD IDRLISNHVE RMRMEIEEKR KTQGRRIVEA VEQGLMKTLR AKDDEINHIG KLNLFLEEKV
201: KSLCVENQIW RDVAQSNEAT VNALRSNLQQ VLAAVERNRW EEPPTVADDA QSCCGSNDEG DSEEERWKLA GEAQDTKKMC RVGMSMCRSC GKGEASVLLL
301: PCRHMCLCSV CGSSLNTCPI CKSPKTASLH VNLSS
Arabidopsis Description
BRG3Probable BOI-related E3 ubiquitin-protein ligase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDD1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.