Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37172 | Canola | cytosol | 93.4 | 93.71 |
| CDX77733 | Canola | nucleus | 77.89 | 78.67 |
| CDY33511 | Canola | nucleus | 77.89 | 77.89 |
| CDY43447 | Canola | nucleus | 73.6 | 73.84 |
| AT5G47050.1 | Thale cress | nucleus | 72.94 | 73.67 |
| CDY03162 | Canola | cytosol | 74.59 | 70.19 |
| CDY09609 | Canola | cytosol | 46.53 | 57.09 |
| CDX90458 | Canola | cytosol | 56.11 | 55.92 |
| KRH77271 | Soybean | plastid | 47.19 | 44.41 |
| CDY34127 | Canola | extracellular | 8.58 | 43.33 |
| KRH28216 | Soybean | nucleus | 46.53 | 42.86 |
| Solyc06g061020.2.1 | Tomato | nucleus | 46.53 | 42.6 |
| Solyc08g077460.2.1 | Tomato | nucleus | 48.84 | 42.53 |
| PGSC0003DMT400004642 | Potato | nucleus | 48.51 | 42.49 |
| VIT_02s0012g00290.t01 | Wine grape | cytosol, nucleus, plastid | 46.53 | 41.84 |
| PGSC0003DMT400068387 | Potato | nucleus | 46.2 | 40.94 |
| Solyc08g007120.2.1 | Tomato | nucleus | 44.22 | 40.48 |
| KRH04275 | Soybean | nucleus | 45.54 | 38.66 |
| KRH57556 | Soybean | nucleus | 44.55 | 38.57 |
| PGSC0003DMT400052841 | Potato | nucleus | 43.23 | 37.54 |
| GSMUA_Achr1P00560_001 | Banana | nucleus | 34.32 | 35.99 |
| GSMUA_Achr2P12040_001 | Banana | plastid | 31.02 | 34.94 |
| GSMUA_Achr2P18250_001 | Banana | nucleus | 37.62 | 34.55 |
| GSMUA_Achr4P30100_001 | Banana | plastid | 34.65 | 34.43 |
| GSMUA_Achr8P14860_001 | Banana | nucleus | 36.63 | 32.94 |
| Os02t0687500-01 | Rice | cytosol, nucleus, plastid | 33.0 | 31.45 |
| GSMUA_Achr4P21690_001 | Banana | nucleus | 32.34 | 30.25 |
| Os10t0565500-01 | Rice | nucleus | 34.65 | 29.91 |
| TraesCS6D01G243000.1 | Wheat | cytosol | 32.67 | 29.64 |
| Zm00001d047069_P001 | Maize | cytosol | 32.34 | 29.52 |
| TraesCS6B01G289500.1 | Wheat | nucleus | 32.67 | 29.29 |
| TraesCS6A01G262200.1 | Wheat | nucleus | 32.01 | 28.53 |
| KXG38894 | Sorghum | cytosol, mitochondrion, nucleus | 32.67 | 28.45 |
| Zm00001d017649_P001 | Maize | plastid | 31.02 | 28.4 |
| HORVU6Hr1G066640.4 | Barley | nucleus | 32.01 | 28.28 |
| EES05709 | Sorghum | nucleus | 32.34 | 27.76 |
| TraesCS1D01G217800.1 | Wheat | cytosol | 29.37 | 27.73 |
| Zm00001d029988_P001 | Maize | cytosol, mitochondrion, nucleus | 30.69 | 27.68 |
| Zm00001d051484_P001 | Maize | nucleus, plastid | 31.68 | 27.2 |
| TraesCS1A01G215300.1 | Wheat | cytosol | 29.04 | 27.16 |
| CDY37958 | Canola | cytosol, plastid | 29.37 | 26.25 |
| CDY52651 | Canola | cytosol | 19.14 | 26.24 |
| HORVU1Hr1G054930.3 | Barley | cytosol | 28.38 | 26.22 |
| CDX93396 | Canola | cytosol | 29.04 | 26.19 |
| TraesCS1B01G228800.1 | Wheat | cytosol | 28.05 | 26.07 |
| CDY24542 | Canola | nucleus | 27.39 | 25.38 |
| CDY17103 | Canola | cytosol | 24.75 | 25.34 |
| CDX72513 | Canola | cytosol | 19.47 | 25.21 |
| CDX94520 | Canola | cytosol | 19.47 | 25.21 |
| CDY07541 | Canola | cytosol | 19.47 | 25.21 |
| CDY21311 | Canola | cytosol | 19.47 | 25.21 |
| CDY09318 | Canola | cytosol | 19.47 | 25.21 |
| CDY40647 | Canola | cytosol | 19.47 | 25.11 |
| CDY20611 | Canola | nucleus | 28.05 | 24.93 |
| CDY20963 | Canola | nucleus | 27.72 | 24.85 |
| CDX69109 | Canola | nucleus | 16.5 | 24.39 |
| CDY06767 | Canola | cytosol | 24.42 | 24.34 |
| CDY40841 | Canola | cytosol | 23.43 | 23.75 |
| CDY26402 | Canola | cytosol | 23.1 | 23.65 |
| CDX73168 | Canola | cytosol | 19.47 | 23.51 |
| CDY15019 | Canola | cytosol | 19.47 | 23.51 |
| CDX76311 | Canola | cytosol | 19.47 | 23.32 |
| CDY17048 | Canola | cytosol | 23.76 | 23.15 |
| CDY17506 | Canola | cytosol, nucleus, plastid | 19.14 | 22.92 |
| CDY01615 | Canola | cytosol | 22.77 | 22.62 |
| CDY71607 | Canola | cytosol | 22.77 | 22.55 |
| CDY51918 | Canola | cytosol | 20.79 | 21.95 |
| CDY43390 | Canola | cytosol | 23.43 | 21.85 |
| CDY24237 | Canola | nucleus | 22.77 | 21.3 |
| CDX87407 | Canola | nucleus | 21.78 | 20.89 |
| CDX79294 | Canola | nucleus | 20.79 | 20.72 |
| CDY71192 | Canola | cytosol | 19.14 | 20.71 |
| CDX82568 | Canola | nucleus | 23.1 | 20.59 |
| CDX88507 | Canola | nucleus | 20.13 | 20.47 |
| CDY13070 | Canola | cytosol | 18.81 | 20.43 |
| CDY64561 | Canola | nucleus | 22.77 | 20.29 |
| CDY46345 | Canola | cytosol | 18.48 | 19.86 |
| CDY18062 | Canola | cytosol | 17.82 | 19.15 |
| CDY23552 | Canola | cytosol | 9.9 | 13.82 |
Protein Annotations
| KEGG:00220+6.3.2.- | KEGG:00261+6.3.2.- | KEGG:00380+6.3.2.- | Gene3D:3.30.40.10 | MapMan:35.1 | GO:A0A078IPG9 |
| UniProt:A0A078IPG9 | EnsemblPlants:CDY51856 | ProteinID:CDY51856 | ProteinID:CDY51856.1 | ncoils:Coil | InterPro:E3ligase_BOI_like |
| EnsemblPlantsGene:GSBRNA2T00004351001 | InterPro:IPR001841 | InterPro:IPR013083 | PFAM:PF13920 | PIRSF:PIRSF036836 | PFscan:PS50089 |
| PANTHER:PTHR42647 | PANTHER:PTHR42647:SF13 | UniPathway:UPA00144 | UniParc:UPI0004EF1E73 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD |
Description
BnaC02g47560DBnaC02g47560D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IPG9]
Coordinates
chrLK033034:-:79526..80710
Molecular Weight (calculated)
33639.0 Da
IEP (calculated)
7.683
GRAVY (calculated)
-0.468
Length
303 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVQTHDHLF TMLFLNRNGQ EGKAFSPELQ KSQFPSITAG VGSRKRAREV SSVIDLDITA SLMNPTPSTP PQFIGRRGQT ANVVSTGLRL SQVQCQNREH
101: GLTTFPMITR DIAGEIKGQT DELDILLQTQ GAELRRMLTE NNERHYRELL RTTEESVRRR LREKEAEIVK ATRRYAELEA RAAQMETESR AWQVRAAARE
201: AEATSLQVRL QQAFANGGGV TATDPKSGSD DCVDEAEDAE SAYVDPDRFE LIGPSCRICR RRSATVLALP CRHLILCKGC DGSVRVCPVC LSSKNSSVEV
301: LFS
101: GLTTFPMITR DIAGEIKGQT DELDILLQTQ GAELRRMLTE NNERHYRELL RTTEESVRRR LREKEAEIVK ATRRYAELEA RAAQMETESR AWQVRAAARE
201: AEATSLQVRL QQAFANGGGV TATDPKSGSD DCVDEAEDAE SAYVDPDRFE LIGPSCRICR RRSATVLALP CRHLILCKGC DGSVRVCPVC LSSKNSSVEV
301: LFS
001: MAVQAHHHPS TLFFLNNGQE GNDQPHKSQF HSINAGVDTR KRAREVSSVI DLDITAAPMN PPPQTPPQVI GRRQNPNVVS TGLRLSREQS QNQEQRFLSF
101: PITGDVAGEI KSQTDELNRF LQIQGEQLKR MLAENSERNY RELLRTTEES VRRRLREKEA EIEKATRRHV ELEARATQIE TEARAWQMRA AAREAEATSL
201: QAQLHQAVVV AHGGGVITTV EPQSGSVDGV DEAEDAESAY VDPDRVEMIG PGCRICRRRS ATVLALPCRH LVMCTECDGS VRICPLCLST KNSSVEVFYS
101: PITGDVAGEI KSQTDELNRF LQIQGEQLKR MLAENSERNY RELLRTTEES VRRRLREKEA EIEKATRRHV ELEARATQIE TEARAWQMRA AAREAEATSL
201: QAQLHQAVVV AHGGGVITTV EPQSGSVDGV DEAEDAESAY VDPDRVEMIG PGCRICRRRS ATVLALPCRH LVMCTECDGS VRICPLCLST KNSSVEVFYS
Arabidopsis Description
SBP (S-ribonuclease binding protein) family protein [Source:UniProtKB/TrEMBL;Acc:Q9FJQ8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.