Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra028364.1-P | Field mustard | cytosol, nucleus, plastid | 98.23 | 98.23 |
| CDY46345 | Canola | cytosol | 95.39 | 95.39 |
| CDY71192 | Canola | cytosol | 86.52 | 87.14 |
| CDY13070 | Canola | cytosol | 86.17 | 87.1 |
| CDY26402 | Canola | cytosol | 65.96 | 62.84 |
| AT5G45100.1 | Thale cress | cytosol | 62.41 | 59.86 |
| CDY21311 | Canola | cytosol | 46.1 | 55.56 |
| CDY09318 | Canola | cytosol | 46.1 | 55.56 |
| CDY07541 | Canola | cytosol | 46.1 | 55.56 |
| CDX94520 | Canola | cytosol | 46.1 | 55.56 |
| CDY51918 | Canola | cytosol | 53.55 | 52.61 |
| CDY01615 | Canola | cytosol | 55.67 | 51.48 |
| CDY71607 | Canola | cytosol | 55.32 | 50.98 |
| KRH36722 | Soybean | nucleus | 41.84 | 38.06 |
| KRH11729 | Soybean | nucleus | 42.2 | 38.02 |
| PGSC0003DMT400062617 | Potato | nucleus | 40.07 | 37.67 |
| Solyc02g031710.2.1 | Tomato | nucleus | 40.07 | 36.45 |
| GSMUA_Achr4P23050_001 | Banana | nucleus | 24.11 | 36.17 |
| GSMUA_Achr7P00850_001 | Banana | plastid | 29.43 | 36.09 |
| PGSC0003DMT400026783 | Potato | cytosol, mitochondrion, nucleus, plastid, vacuole | 40.78 | 35.6 |
| VIT_10s0042g01070.t01 | Wine grape | nucleus | 37.94 | 35.31 |
| KRG89416 | Soybean | nucleus | 39.01 | 35.03 |
| CDY34127 | Canola | extracellular | 7.45 | 35.0 |
| GSMUA_Achr2P13160_001 | Banana | plastid | 30.5 | 34.82 |
| KRH50476 | Soybean | cytosol, nucleus, plastid | 38.65 | 34.06 |
| GSMUA_Achr5P02100_001 | Banana | plastid | 28.72 | 33.2 |
| GSMUA_Achr4P28300_001 | Banana | nucleus | 28.37 | 33.2 |
| CDX88507 | Canola | nucleus | 34.04 | 32.21 |
| CDX87407 | Canola | nucleus | 34.75 | 31.01 |
| GSMUA_Achr4P32070_001 | Banana | nucleus | 31.21 | 30.77 |
| Solyc02g069180.2.1 | Tomato | plastid | 29.79 | 29.68 |
| CDX79294 | Canola | nucleus | 31.91 | 29.61 |
| CDY64561 | Canola | nucleus | 34.4 | 28.53 |
| CDX82568 | Canola | nucleus | 34.04 | 28.24 |
| TraesCS3B01G484600.1 | Wheat | cytosol | 27.3 | 28.0 |
| CDY24237 | Canola | nucleus | 31.21 | 27.16 |
| CDY43390 | Canola | cytosol | 31.21 | 27.08 |
| TraesCS3A01G448500.1 | Wheat | mitochondrion | 28.01 | 26.96 |
| TraesCS3D01G441300.1 | Wheat | mitochondrion | 27.66 | 26.9 |
| GSMUA_Achr6P31690_001 | Banana | nucleus | 28.37 | 26.85 |
| TraesCS7D01G431300.1 | Wheat | mitochondrion | 29.79 | 26.84 |
| GSMUA_Achr9P09830_001 | Banana | nucleus | 30.5 | 26.79 |
| TraesCS3D01G441000.1 | Wheat | mitochondrion | 27.3 | 26.55 |
| TraesCS6A01G079900.1 | Wheat | cytosol, mitochondrion, plastid | 22.34 | 26.36 |
| HORVU4Hr1G003180.3 | Barley | mitochondrion | 28.37 | 26.06 |
| TraesCS7B01G340700.1 | Wheat | mitochondrion | 28.72 | 25.96 |
| CDX69109 | Canola | nucleus | 18.79 | 25.85 |
| TraesCS4B01G019600.1 | Wheat | mitochondrion | 28.37 | 25.81 |
| TraesCS7A01G442100.1 | Wheat | mitochondrion | 28.72 | 25.8 |
| TraesCS7A01G441900.1 | Wheat | mitochondrion | 28.72 | 25.63 |
| TraesCS7A01G442300.1 | Wheat | mitochondrion | 28.72 | 25.55 |
| TraesCS6D01G110700.1 | Wheat | nucleus | 23.76 | 25.48 |
| TraesCS4D01G018100.1 | Wheat | mitochondrion, nucleus | 27.3 | 25.41 |
| HORVU6Hr1G021960.1 | Barley | plastid | 23.4 | 25.29 |
| HORVU6Hr1G021880.1 | Barley | plastid | 23.4 | 25.29 |
| TraesCS7B01G340500.1 | Wheat | mitochondrion | 28.01 | 25.08 |
| EER91098 | Sorghum | nucleus | 31.21 | 24.79 |
| TraesCS6B01G149100.1 | Wheat | nucleus | 23.05 | 24.71 |
| HORVU7Hr1G100540.2 | Barley | mitochondrion | 26.6 | 24.67 |
| TraesCS7B01G340600.1 | Wheat | mitochondrion | 26.95 | 24.36 |
| TraesCS6D01G073600.1 | Wheat | cytosol, nucleus, plastid | 23.4 | 24.35 |
| TraesCS7D01G431200.1 | Wheat | mitochondrion | 26.24 | 24.03 |
| TraesCS4A01G293700.1 | Wheat | mitochondrion | 26.24 | 24.03 |
| HORVU7Hr1G100520.1 | Barley | cytosol, mitochondrion | 25.89 | 23.78 |
| Zm00001d013571_P001 | Maize | cytosol, nucleus, plastid | 27.66 | 23.64 |
| TraesCS6A01G120700.1 | Wheat | nucleus | 21.99 | 23.57 |
| CDY52651 | Canola | cytosol | 18.44 | 23.53 |
| TraesCS7D01G431100.1 | Wheat | mitochondrion, nucleus | 25.53 | 22.93 |
| CDX72513 | Canola | cytosol | 18.79 | 22.65 |
| CDY40647 | Canola | cytosol | 18.44 | 22.13 |
| CDY15019 | Canola | cytosol | 18.79 | 21.12 |
| CDX73168 | Canola | cytosol | 18.79 | 21.12 |
| CDY17506 | Canola | cytosol, nucleus, plastid | 18.79 | 20.95 |
| CDX76311 | Canola | cytosol | 18.79 | 20.95 |
| Zm00001d033419_P001 | Maize | plastid | 20.21 | 20.36 |
| CDY24542 | Canola | nucleus | 21.63 | 18.65 |
| CDY09609 | Canola | cytosol | 16.31 | 18.62 |
| CDY17103 | Canola | cytosol | 19.15 | 18.24 |
| CDY20963 | Canola | nucleus | 21.63 | 18.05 |
| CDX77733 | Canola | nucleus | 19.15 | 18.0 |
| CDY23552 | Canola | cytosol | 13.83 | 17.97 |
| CDY20611 | Canola | nucleus | 21.63 | 17.89 |
| CDY51856 | Canola | cytosol | 19.15 | 17.82 |
| CDY33511 | Canola | nucleus | 19.15 | 17.82 |
| CDY37172 | Canola | cytosol | 18.79 | 17.55 |
| CDX90458 | Canola | cytosol | 18.79 | 17.43 |
| CDY40841 | Canola | cytosol | 18.44 | 17.39 |
| CDY17048 | Canola | cytosol | 19.15 | 17.36 |
| CDX93396 | Canola | cytosol | 20.57 | 17.26 |
| CDY06767 | Canola | cytosol | 18.44 | 17.11 |
| CDY43447 | Canola | nucleus | 18.09 | 16.89 |
| CDY37958 | Canola | cytosol, plastid | 20.21 | 16.81 |
| CDY03162 | Canola | cytosol | 18.79 | 16.46 |
Protein Annotations
| EnsemblPlants:CDY18062 | EnsemblPlantsGene:GSBRNA2T00002537001 | Gene3D:3.30.40.10 | GO:A0A078FZ62 | InterPro:E3ligase_BOI_like | InterPro:IPR001841 |
| InterPro:IPR013083 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR42647 | PANTHER:PTHR42647:SF12 | PFAM:PF13920 |
| PFscan:PS50089 | PIRSF:PIRSF036836 | ProteinID:CDY18062 | ProteinID:CDY18062.1 | SEG:seg | SUPFAM:SSF57850 |
| UniParc:UPI0004EEF8EE | UniProt:A0A078FZ62 | MapMan:35.1 | : | : | : |
Description
BnaA01g23230DBnaA01g23230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FZ62]
Coordinates
chrLK032082:-:53497..54674
Molecular Weight (calculated)
31114.0 Da
IEP (calculated)
7.661
GRAVY (calculated)
-0.313
Length
282 amino acids
Sequence
(BLAST)
(BLAST)
001: MNNQIIPDGF PVIFGDRQLQ HMQSRAAYPI QTAPSVNKYH FNQSPAIFKR QRDYALDSNA LMTAQKRRSV AFAPPQSLIE AQLVSQVQQQ QTDIDLFATQ
101: QTQTLRLELE ARQRTQTLSL ASAVQSAFVK KLKQRDDEIV RMGKLNYVLQ ERVKSLYVEN QTLRDLAQTN EATANTLRSN LEHVLAQVDE FPATAATGGD
201: VFRPPVEEDT VSSCGSCDGA DGGDVTAVTR GCKRCGERTA SVLVLPCRHL CLCTVCGSAL LQSCPVCNTV MHASVHVNNN MS
101: QTQTLRLELE ARQRTQTLSL ASAVQSAFVK KLKQRDDEIV RMGKLNYVLQ ERVKSLYVEN QTLRDLAQTN EATANTLRSN LEHVLAQVDE FPATAATGGD
201: VFRPPVEEDT VSSCGSCDGA DGGDVTAVTR GCKRCGERTA SVLVLPCRHL CLCTVCGSAL LQSCPVCNTV MHASVHVNNN MS
001: MNNGQQIAGG GFPVTIGDRN LQYIDPINSF NKSESELTAI SKRQRDSTFD SDALIASQKR RAIAFSPASL IDAELVSQIQ QQNSEIDRFV AQQTETLRIE
101: LEARQRTQTR MLASAVQNAI LKKLKAKDEE IIRMGKLNWV LQERVKNLYV ENQIWRDLAQ TNEATANNLR SNLEQVLAQV DDLDAFRRPL VEEADDAESS
201: CGSCDGGDVT AVVNGGCKRC GELTASVLVL PCRHLCLCTV CGSSALLRTC PVCDMVMTAS VHVNMSS
101: LEARQRTQTR MLASAVQNAI LKKLKAKDEE IIRMGKLNWV LQERVKNLYV ENQIWRDLAQ TNEATANNLR SNLEQVLAQV DDLDAFRRPL VEEADDAESS
201: CGSCDGGDVT AVVNGGCKRC GELTASVLVL PCRHLCLCTV CGSSALLRTC PVCDMVMTAS VHVNMSS
Arabidopsis Description
BRG1BOI-related E3 ubiquitin-protein ligase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHE4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.