Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024967.1-P | Field mustard | plastid | 79.87 | 97.98 |
| CDX77733 | Canola | nucleus | 95.71 | 96.67 |
| CDY43447 | Canola | nucleus | 79.54 | 79.8 |
| CDY37172 | Canola | cytosol | 78.55 | 78.81 |
| CDY51856 | Canola | cytosol | 77.89 | 77.89 |
| AT5G47050.1 | Thale cress | nucleus | 75.58 | 76.33 |
| CDY03162 | Canola | cytosol | 79.54 | 74.84 |
| CDY09609 | Canola | cytosol | 48.51 | 59.51 |
| CDX90458 | Canola | cytosol | 56.11 | 55.92 |
| KRH77271 | Soybean | plastid | 49.17 | 46.27 |
| Solyc06g061020.2.1 | Tomato | nucleus | 48.18 | 44.11 |
| KRH28216 | Soybean | nucleus | 47.85 | 44.07 |
| VIT_02s0012g00290.t01 | Wine grape | cytosol, nucleus, plastid | 48.51 | 43.62 |
| CDY34127 | Canola | extracellular | 8.58 | 43.33 |
| Solyc08g077460.2.1 | Tomato | nucleus | 49.51 | 43.1 |
| PGSC0003DMT400004642 | Potato | nucleus | 49.17 | 43.06 |
| Solyc08g007120.2.1 | Tomato | nucleus | 46.2 | 42.3 |
| PGSC0003DMT400068387 | Potato | nucleus | 47.52 | 42.11 |
| KRH04275 | Soybean | nucleus | 47.52 | 40.34 |
| KRH57556 | Soybean | nucleus | 45.87 | 39.71 |
| PGSC0003DMT400052841 | Potato | nucleus | 44.55 | 38.68 |
| GSMUA_Achr2P12040_001 | Banana | plastid | 33.66 | 37.92 |
| GSMUA_Achr4P30100_001 | Banana | plastid | 37.62 | 37.38 |
| GSMUA_Achr2P18250_001 | Banana | nucleus | 39.6 | 36.36 |
| GSMUA_Achr1P00560_001 | Banana | nucleus | 34.65 | 36.33 |
| GSMUA_Achr8P14860_001 | Banana | nucleus | 39.27 | 35.31 |
| Os02t0687500-01 | Rice | cytosol, nucleus, plastid | 36.96 | 35.22 |
| GSMUA_Achr4P21690_001 | Banana | nucleus | 36.63 | 34.26 |
| TraesCS6D01G243000.1 | Wheat | cytosol | 36.96 | 33.53 |
| TraesCS6B01G289500.1 | Wheat | nucleus | 37.29 | 33.43 |
| HORVU6Hr1G066640.4 | Barley | nucleus | 36.96 | 32.65 |
| TraesCS6A01G262200.1 | Wheat | nucleus | 36.63 | 32.65 |
| Os10t0565500-01 | Rice | nucleus | 36.96 | 31.91 |
| Zm00001d017649_P001 | Maize | plastid | 34.32 | 31.42 |
| Zm00001d047069_P001 | Maize | cytosol | 34.32 | 31.33 |
| TraesCS1D01G217800.1 | Wheat | cytosol | 32.67 | 30.84 |
| EES05709 | Sorghum | nucleus | 35.64 | 30.59 |
| TraesCS1A01G215300.1 | Wheat | cytosol | 32.01 | 29.94 |
| KXG38894 | Sorghum | cytosol, mitochondrion, nucleus | 34.32 | 29.89 |
| TraesCS1B01G228800.1 | Wheat | cytosol | 32.01 | 29.75 |
| Zm00001d051484_P001 | Maize | nucleus, plastid | 34.65 | 29.75 |
| HORVU1Hr1G054930.3 | Barley | cytosol | 31.68 | 29.27 |
| Zm00001d029988_P001 | Maize | cytosol, mitochondrion, nucleus | 32.01 | 28.87 |
| CDY37958 | Canola | cytosol, plastid | 31.35 | 28.02 |
| CDX93396 | Canola | cytosol | 31.02 | 27.98 |
| CDY24542 | Canola | nucleus | 29.04 | 26.91 |
| CDY52651 | Canola | cytosol | 19.47 | 26.7 |
| CDY17103 | Canola | cytosol | 26.07 | 26.69 |
| CDY09318 | Canola | cytosol | 20.46 | 26.5 |
| CDY07541 | Canola | cytosol | 20.46 | 26.5 |
| CDY21311 | Canola | cytosol | 20.46 | 26.5 |
| CDX94520 | Canola | cytosol | 20.46 | 26.5 |
| CDY20611 | Canola | nucleus | 29.7 | 26.39 |
| CDY20963 | Canola | nucleus | 29.37 | 26.33 |
| CDY06767 | Canola | cytosol | 26.07 | 25.99 |
| CDX72513 | Canola | cytosol | 19.8 | 25.64 |
| CDY40647 | Canola | cytosol | 19.8 | 25.53 |
| CDX69109 | Canola | nucleus | 16.83 | 24.88 |
| CDY40841 | Canola | cytosol | 24.42 | 24.75 |
| CDX73168 | Canola | cytosol | 20.46 | 24.7 |
| CDY15019 | Canola | cytosol | 20.46 | 24.7 |
| CDX76311 | Canola | cytosol | 20.46 | 24.51 |
| CDY17048 | Canola | cytosol | 25.08 | 24.44 |
| CDY01615 | Canola | cytosol | 24.42 | 24.26 |
| CDY71607 | Canola | cytosol | 24.42 | 24.18 |
| CDY17506 | Canola | cytosol, nucleus, plastid | 20.13 | 24.11 |
| CDY26402 | Canola | cytosol | 23.43 | 23.99 |
| CDY51918 | Canola | cytosol | 22.44 | 23.69 |
| CDX87407 | Canola | nucleus | 23.43 | 22.47 |
| CDX88507 | Canola | nucleus | 21.78 | 22.15 |
| CDX79294 | Canola | nucleus | 21.78 | 21.71 |
| CDY43390 | Canola | cytosol | 23.1 | 21.54 |
| CDY24237 | Canola | nucleus | 22.77 | 21.3 |
| CDY71192 | Canola | cytosol | 19.14 | 20.71 |
| CDY13070 | Canola | cytosol | 18.81 | 20.43 |
| CDX82568 | Canola | nucleus | 22.77 | 20.29 |
| CDY64561 | Canola | nucleus | 22.77 | 20.29 |
| CDY46345 | Canola | cytosol | 18.48 | 19.86 |
| CDY18062 | Canola | cytosol | 17.82 | 19.15 |
| CDY23552 | Canola | cytosol | 9.57 | 13.36 |
Protein Annotations
| KEGG:00220+6.3.2.- | KEGG:00261+6.3.2.- | KEGG:00380+6.3.2.- | Gene3D:3.30.40.10 | MapMan:35.1 | GO:A0A078H6M9 |
| UniProt:A0A078H6M9 | EnsemblPlants:CDY33511 | ProteinID:CDY33511 | ProteinID:CDY33511.1 | ncoils:Coil | InterPro:E3ligase_BOI_like |
| EnsemblPlantsGene:GSBRNA2T00054763001 | InterPro:IPR001841 | InterPro:IPR013083 | PFAM:PF13920 | PIRSF:PIRSF036836 | PFscan:PS50089 |
| PANTHER:PTHR42647 | PANTHER:PTHR42647:SF13 | UniPathway:UPA00144 | UniParc:UPI0004EDCF37 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD |
| SEG:seg | : | : | : | : | : |
Description
BnaA06g35620DBnaA06g35620D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H6M9]
Coordinates
chrLK032315:+:354848..356452
Molecular Weight (calculated)
33950.7 Da
IEP (calculated)
6.514
GRAVY (calculated)
-0.750
Length
303 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVQTHHHHP TMFFLNRNGQ EGNDFSQEQQ KSQLPSITTG VNNTRKRARE VIDLENMTSP MNPPPSTPPQ FISRRQTPNV VSTGLRLSQG QSQNREQPSS
101: SSPSFPMINE DIAGEIKRQS DELDIFLQTQ DEQLRRMLAE NSERHYRELL KTTEESVRRR LREKEAEIEK ATRRHAELEA RATQIETESR AWQARAASKE
201: AEATTLQARL QQAVAHGAGV TVAEPNSGSV DGVDEAEDAE SAYVDPDRLE LTGPSCRICW RRSATVLALP CRHLILCKGC DGSVRVCPLC LSSKNSSVEV
301: FFS
101: SSPSFPMINE DIAGEIKRQS DELDIFLQTQ DEQLRRMLAE NSERHYRELL KTTEESVRRR LREKEAEIEK ATRRHAELEA RATQIETESR AWQARAASKE
201: AEATTLQARL QQAVAHGAGV TVAEPNSGSV DGVDEAEDAE SAYVDPDRLE LTGPSCRICW RRSATVLALP CRHLILCKGC DGSVRVCPLC LSSKNSSVEV
301: FFS
001: MAVQAHHHPS TLFFLNNGQE GNDQPHKSQF HSINAGVDTR KRAREVSSVI DLDITAAPMN PPPQTPPQVI GRRQNPNVVS TGLRLSREQS QNQEQRFLSF
101: PITGDVAGEI KSQTDELNRF LQIQGEQLKR MLAENSERNY RELLRTTEES VRRRLREKEA EIEKATRRHV ELEARATQIE TEARAWQMRA AAREAEATSL
201: QAQLHQAVVV AHGGGVITTV EPQSGSVDGV DEAEDAESAY VDPDRVEMIG PGCRICRRRS ATVLALPCRH LVMCTECDGS VRICPLCLST KNSSVEVFYS
101: PITGDVAGEI KSQTDELNRF LQIQGEQLKR MLAENSERNY RELLRTTEES VRRRLREKEA EIEKATRRHV ELEARATQIE TEARAWQMRA AAREAEATSL
201: QAQLHQAVVV AHGGGVITTV EPQSGSVDGV DEAEDAESAY VDPDRVEMIG PGCRICRRRS ATVLALPCRH LVMCTECDGS VRICPLCLST KNSSVEVFYS
Arabidopsis Description
SBP (S-ribonuclease binding protein) family protein [Source:UniProtKB/TrEMBL;Acc:Q9FJQ8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.