Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX82568 | Canola | nucleus | 95.0 | 95.0 |
| CDY43390 | Canola | cytosol | 75.29 | 78.77 |
| AT3G12920.1 | Thale cress | nucleus | 76.47 | 77.61 |
| CDY24237 | Canola | nucleus | 72.94 | 76.54 |
| CDY23552 | Canola | cytosol | 46.76 | 73.27 |
| KRH43767 | Soybean | nucleus | 35.0 | 47.04 |
| VIT_19s0027g00740.t01 | Wine grape | nucleus | 41.47 | 45.63 |
| GSMUA_Achr7P00850_001 | Banana | plastid | 30.0 | 44.35 |
| CDX87407 | Canola | nucleus | 41.18 | 44.3 |
| CDX88507 | Canola | nucleus | 38.24 | 43.62 |
| KRH13682 | Soybean | nucleus | 42.65 | 43.03 |
| GSMUA_Achr2P13160_001 | Banana | plastid | 30.88 | 42.51 |
| CDX79294 | Canola | nucleus | 37.94 | 42.43 |
| GSMUA_Achr5P02100_001 | Banana | plastid | 30.29 | 42.21 |
| GSMUA_Achr4P32070_001 | Banana | nucleus | 35.29 | 41.96 |
| CDY21311 | Canola | cytosol | 28.53 | 41.45 |
| CDY09318 | Canola | cytosol | 28.53 | 41.45 |
| CDY07541 | Canola | cytosol | 28.53 | 41.45 |
| CDX94520 | Canola | cytosol | 28.53 | 41.45 |
| CDY34127 | Canola | extracellular | 7.06 | 40.0 |
| GSMUA_Achr4P23050_001 | Banana | nucleus | 21.76 | 39.36 |
| CDY01615 | Canola | cytosol | 34.71 | 38.69 |
| CDY71607 | Canola | cytosol | 34.71 | 38.56 |
| GSMUA_Achr4P28300_001 | Banana | nucleus | 26.76 | 37.76 |
| CDY51918 | Canola | cytosol | 31.76 | 37.63 |
| GSMUA_Achr6P31690_001 | Banana | nucleus | 32.65 | 37.25 |
| CDY26402 | Canola | cytosol | 32.06 | 36.82 |
| CDY71192 | Canola | cytosol | 29.12 | 35.36 |
| GSMUA_Achr9P09830_001 | Banana | nucleus | 32.94 | 34.89 |
| CDY13070 | Canola | cytosol | 28.24 | 34.41 |
| CDY18062 | Canola | cytosol | 28.53 | 34.4 |
| CDY46345 | Canola | cytosol | 27.94 | 33.69 |
| TraesCS7D01G431300.1 | Wheat | mitochondrion | 30.0 | 32.59 |
| TraesCS3D01G441300.1 | Wheat | mitochondrion | 27.65 | 32.41 |
| TraesCS3D01G441000.1 | Wheat | mitochondrion | 27.35 | 32.07 |
| TraesCS4D01G018100.1 | Wheat | mitochondrion, nucleus | 28.53 | 32.01 |
| HORVU4Hr1G003180.3 | Barley | mitochondrion | 28.82 | 31.92 |
| TraesCS3B01G484600.1 | Wheat | cytosol | 25.59 | 31.64 |
| Zm00001d013571_P001 | Maize | cytosol, nucleus, plastid | 30.59 | 31.52 |
| HORVU7Hr1G100520.1 | Barley | cytosol, mitochondrion | 28.24 | 31.27 |
| TraesCS3A01G448500.1 | Wheat | mitochondrion | 26.76 | 31.06 |
| TraesCS4B01G019600.1 | Wheat | mitochondrion | 27.65 | 30.32 |
| TraesCS7A01G442300.1 | Wheat | mitochondrion | 28.24 | 30.28 |
| HORVU7Hr1G100540.2 | Barley | mitochondrion | 27.06 | 30.26 |
| TraesCS7A01G442100.1 | Wheat | mitochondrion | 27.94 | 30.25 |
| TraesCS4A01G293700.1 | Wheat | mitochondrion | 27.35 | 30.19 |
| TraesCS7B01G340700.1 | Wheat | mitochondrion | 27.35 | 29.81 |
| EER91098 | Sorghum | nucleus | 30.88 | 29.58 |
| TraesCS7B01G340600.1 | Wheat | mitochondrion | 27.06 | 29.49 |
| TraesCS7B01G340500.1 | Wheat | mitochondrion | 26.47 | 28.57 |
| TraesCS6A01G079900.1 | Wheat | cytosol, mitochondrion, plastid | 20.0 | 28.45 |
| TraesCS7D01G431100.1 | Wheat | mitochondrion, nucleus | 25.88 | 28.03 |
| TraesCS7D01G431200.1 | Wheat | mitochondrion | 25.29 | 27.92 |
| TraesCS6D01G073600.1 | Wheat | cytosol, nucleus, plastid | 22.06 | 27.68 |
| TraesCS7A01G441900.1 | Wheat | mitochondrion | 25.29 | 27.22 |
| HORVU6Hr1G021880.1 | Barley | plastid | 20.88 | 27.2 |
| HORVU6Hr1G021960.1 | Barley | plastid | 20.88 | 27.2 |
| TraesCS6A01G120700.1 | Wheat | nucleus | 20.88 | 27.0 |
| TraesCS6D01G110700.1 | Wheat | nucleus | 20.59 | 26.62 |
| TraesCS6B01G149100.1 | Wheat | nucleus | 20.59 | 26.62 |
| CDX69109 | Canola | nucleus | 15.88 | 26.34 |
| Zm00001d033419_P001 | Maize | plastid | 21.47 | 26.07 |
| CDY52651 | Canola | cytosol | 16.47 | 25.34 |
| CDX72513 | Canola | cytosol | 17.35 | 25.21 |
| CDY40647 | Canola | cytosol | 17.35 | 25.11 |
| CDX76311 | Canola | cytosol | 17.65 | 23.72 |
| CDX73168 | Canola | cytosol | 17.35 | 23.51 |
| CDY15019 | Canola | cytosol | 17.35 | 23.51 |
| CDY17506 | Canola | cytosol, nucleus, plastid | 17.35 | 23.32 |
| CDY17103 | Canola | cytosol | 20.29 | 23.31 |
| CDY17048 | Canola | cytosol | 21.18 | 23.15 |
| CDY40841 | Canola | cytosol | 20.29 | 23.08 |
| CDX93396 | Canola | cytosol | 22.65 | 22.92 |
| CDY33511 | Canola | nucleus | 20.29 | 22.77 |
| CDY51856 | Canola | cytosol | 20.29 | 22.77 |
| CDY06767 | Canola | cytosol | 20.29 | 22.7 |
| CDX77733 | Canola | nucleus | 20.0 | 22.67 |
| CDY24542 | Canola | nucleus | 21.76 | 22.63 |
| CDY37172 | Canola | cytosol | 20.0 | 22.52 |
| CDY43447 | Canola | nucleus | 20.0 | 22.52 |
| CDY37958 | Canola | cytosol, plastid | 22.06 | 22.12 |
| CDY20963 | Canola | nucleus | 21.76 | 21.89 |
| CDY20611 | Canola | nucleus | 21.76 | 21.7 |
| CDY03162 | Canola | cytosol | 20.0 | 21.12 |
| CDX90458 | Canola | cytosol | 18.24 | 20.39 |
| CDY09609 | Canola | cytosol | 13.82 | 19.03 |
Protein Annotations
| KEGG:00220+6.3.2.- | KEGG:00261+6.3.2.- | KEGG:00380+6.3.2.- | Gene3D:3.30.40.10 | MapMan:35.1 | GO:A0A078JFS7 |
| UniProt:A0A078JFS7 | EnsemblPlants:CDY64561 | ProteinID:CDY64561 | ProteinID:CDY64561.1 | InterPro:E3ligase_BOI_like | EnsemblPlantsGene:GSBRNA2T00042349001 |
| InterPro:IPR001841 | InterPro:IPR013083 | PFAM:PF13920 | PIRSF:PIRSF036836 | PFscan:PS50089 | PANTHER:PTHR42647 |
| PANTHER:PTHR42647:SF7 | UniPathway:UPA00144 | UniParc:UPI0004EEAAA8 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | SEG:seg |
Description
BnaCnng44050DBnaCnng44050D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JFS7]
Coordinates
chrLK034484:+:16500..17956
Molecular Weight (calculated)
38079.2 Da
IEP (calculated)
6.874
GRAVY (calculated)
-0.490
Length
340 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVEAHHLNP LCSPNVAGDF LYRDMMHPLE ANSFVYNNQI RYGNVPAATT PFNPTVECQS SLLNPTYNIS PVDYLVHQSI KPTIHSVDSS VTFNSENNGN
101: NVDFLRPGSS SSPRKRRREE SVFVSPMPSQ KRSIDPLMFL GQDLSSNVQH HSFDIDRLIS NHVEIMRLEI EEKRRTQGRK IMEAIEQGLM KKLKAKDEEI
201: NHIVKLNFYL EEKVKSLCVE NQILRDVAQS NEATVNALRS NLQQVLADVE RREEPTAADD TQSCCGSNNE GDSKEKWRLV GEAQDTITRT MCRSCGKGEA
301: SVLLLPCRHM CLCTVCGSSV NTCPVCKSPK NASLHVNLSS
101: NVDFLRPGSS SSPRKRRREE SVFVSPMPSQ KRSIDPLMFL GQDLSSNVQH HSFDIDRLIS NHVEIMRLEI EEKRRTQGRK IMEAIEQGLM KKLKAKDEEI
201: NHIVKLNFYL EEKVKSLCVE NQILRDVAQS NEATVNALRS NLQQVLADVE RREEPTAADD TQSCCGSNNE GDSKEKWRLV GEAQDTITRT MCRSCGKGEA
301: SVLLLPCRHM CLCTVCGSSV NTCPVCKSPK NASLHVNLSS
001: MAVEAHHLNP LFSSNREMIH PVEASGVVYN TQMRYGTVPT FNPTVECQTS LFNPIYNISP VDRLVHQSMK PTIQSVDSSL TFNSDNNVDF LRPVSSRKRS
101: REESVVLNPS AYMQIQKNPT DPLMFLGQDL SSNVQQHHFD IDRLISNHVE RMRMEIEEKR KTQGRRIVEA VEQGLMKTLR AKDDEINHIG KLNLFLEEKV
201: KSLCVENQIW RDVAQSNEAT VNALRSNLQQ VLAAVERNRW EEPPTVADDA QSCCGSNDEG DSEEERWKLA GEAQDTKKMC RVGMSMCRSC GKGEASVLLL
301: PCRHMCLCSV CGSSLNTCPI CKSPKTASLH VNLSS
101: REESVVLNPS AYMQIQKNPT DPLMFLGQDL SSNVQQHHFD IDRLISNHVE RMRMEIEEKR KTQGRRIVEA VEQGLMKTLR AKDDEINHIG KLNLFLEEKV
201: KSLCVENQIW RDVAQSNEAT VNALRSNLQQ VLAAVERNRW EEPPTVADDA QSCCGSNDEG DSEEERWKLA GEAQDTKKMC RVGMSMCRSC GKGEASVLLL
301: PCRHMCLCSV CGSSLNTCPI CKSPKTASLH VNLSS
Arabidopsis Description
BRG3Probable BOI-related E3 ubiquitin-protein ligase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDD1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.