Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- cytosol 2
- mitochondrion 1
- extracellular 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra017691.1-P | Field mustard | cytosol, extracellular, nucleus | 99.57 | 99.57 |
| CDX72513 | Canola | cytosol | 89.79 | 90.17 |
| CDX73168 | Canola | cytosol | 81.28 | 76.1 |
| CDY15019 | Canola | cytosol | 81.28 | 76.1 |
| CDX76311 | Canola | cytosol | 81.28 | 75.49 |
| CDY17506 | Canola | cytosol, nucleus, plastid | 80.85 | 75.1 |
| CDY52651 | Canola | cytosol | 68.09 | 72.4 |
| CDX69109 | Canola | nucleus | 62.98 | 72.2 |
| AT4G35070.1 | Thale cress | cytosol | 76.17 | 67.55 |
| VIT_03s0038g02450.t01 | Wine grape | nucleus | 39.57 | 43.06 |
| Solyc01g111610.2.1 | Tomato | cytosol | 40.85 | 39.51 |
| PGSC0003DMT400015829 | Potato | nucleus | 42.13 | 39.29 |
| PGSC0003DMT400068728 | Potato | mitochondrion, nucleus | 43.4 | 38.64 |
| Solyc10g055560.1.1 | Tomato | nucleus | 43.4 | 37.78 |
| KRH51394 | Soybean | nucleus | 40.0 | 32.75 |
| KRH60696 | Soybean | nucleus, plastid | 37.45 | 30.14 |
| KRH24321 | Soybean | cytosol | 35.32 | 28.82 |
| KRG94235 | Soybean | cytosol | 29.79 | 28.23 |
| KRH29000 | Soybean | cytosol | 34.47 | 28.22 |
| CDY34127 | Canola | extracellular | 6.81 | 26.67 |
| CDY09609 | Canola | cytosol | 22.98 | 21.86 |
| CDY40841 | Canola | cytosol | 25.96 | 20.4 |
| CDX79294 | Canola | nucleus | 26.38 | 20.39 |
| CDY43447 | Canola | nucleus | 25.96 | 20.2 |
| CDY09318 | Canola | cytosol | 20.0 | 20.09 |
| CDY07541 | Canola | cytosol | 20.0 | 20.09 |
| CDX94520 | Canola | cytosol | 20.0 | 20.09 |
| CDY21311 | Canola | cytosol | 20.0 | 20.09 |
| CDX77733 | Canola | nucleus | 25.53 | 20.0 |
| CDY26402 | Canola | cytosol | 25.11 | 19.93 |
| CDY33511 | Canola | nucleus | 25.53 | 19.8 |
| CDX88507 | Canola | nucleus | 25.11 | 19.8 |
| CDX87407 | Canola | nucleus | 26.38 | 19.62 |
| CDY51856 | Canola | cytosol | 25.11 | 19.47 |
| CDY17048 | Canola | cytosol | 25.11 | 18.97 |
| CDY17103 | Canola | cytosol | 23.83 | 18.92 |
| CDY37172 | Canola | cytosol | 24.26 | 18.87 |
| CDX90458 | Canola | cytosol | 24.26 | 18.75 |
| CDY03162 | Canola | cytosol | 25.53 | 18.63 |
| CDY24237 | Canola | nucleus | 25.53 | 18.52 |
| CDY51918 | Canola | cytosol | 22.55 | 18.47 |
| CDY43390 | Canola | cytosol | 25.53 | 18.46 |
| CDY18062 | Canola | cytosol | 22.13 | 18.44 |
| CDY06767 | Canola | cytosol | 23.83 | 18.42 |
| CDY01615 | Canola | cytosol | 23.83 | 18.36 |
| CDY46345 | Canola | cytosol | 21.7 | 18.09 |
| CDY71607 | Canola | cytosol | 23.4 | 17.97 |
| CDY13070 | Canola | cytosol | 21.28 | 17.92 |
| CDY71192 | Canola | cytosol | 21.28 | 17.86 |
| CDX82568 | Canola | nucleus | 25.53 | 17.65 |
| CDY64561 | Canola | nucleus | 25.11 | 17.35 |
| CDX93396 | Canola | cytosol | 21.7 | 15.18 |
| CDY37958 | Canola | cytosol, plastid | 21.28 | 14.75 |
| CDY24542 | Canola | nucleus | 20.43 | 14.68 |
| CDY20611 | Canola | nucleus | 21.28 | 14.66 |
| CDY20963 | Canola | nucleus | 20.43 | 14.2 |
| CDY23552 | Canola | cytosol | 9.36 | 10.14 |
Protein Annotations
| EnsemblPlants:CDY40647 | EnsemblPlantsGene:GSBRNA2T00071511001 | Gene3D:3.30.40.10 | GO:A0A078HS41 | InterPro:E3ligase_BOI_like | InterPro:IPR013083 |
| InterPro:Znf_RING/FYVE/PHD | KEGG:00220+6.3.2.- | KEGG:00261+6.3.2.- | KEGG:00380+6.3.2.- | ncoils:Coil | PANTHER:PTHR42647 |
| PANTHER:PTHR42647:SF6 | PIRSF:PIRSF036836 | ProteinID:CDY40647 | ProteinID:CDY40647.1 | UniParc:UPI0004EED382 | UniPathway:UPA00144 |
| UniProt:A0A078HS41 | MapMan:35.1 | : | : | : | : |
Description
BnaA03g53160DBnaA03g53160D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HS41]
Coordinates
chrLK032476:-:228936..229929
Molecular Weight (calculated)
26706.9 Da
IEP (calculated)
5.442
GRAVY (calculated)
-0.532
Length
235 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIQAQLSYN APFIGTGGSE LSLINNDGGI GINQSYMNNQ QALFHTQQNR SQSFFDAHME KQRREIDQFI RVQSERLRYA LQEQRKQETE TILRKMEAKA
101: LVLMAQKEEE MSRALSKNME LENLLRKMET ENQTWQRVAR ENEAMVATLN STLEQVRERA ATCRNDVTAA EDEGSFCGDN FPMSSCCLNC GLNGETRVLF
201: LPCRHLCCCT GCEDGLVLCP ICNTPKKNRI EASVF
101: LVLMAQKEEE MSRALSKNME LENLLRKMET ENQTWQRVAR ENEAMVATLN STLEQVRERA ATCRNDVTAA EDEGSFCGDN FPMSSCCLNC GLNGETRVLF
201: LPCRHLCCCT GCEDGLVLCP ICNTPKKNRI EASVF
001: MAIQAQLNYN APNANQIGFG GSEFSLINNN GVIGIGNDQS YLVNNLQLQK DFNQHALFHH QHHQQQQSPS QSFLAAQMEK QKQEIDQFIK IQNERLRYVL
101: QEQRKREMEM ILRKMESKAL LLMSQKEEEM SKALNKNMEL EDLLRKMEME NQTWQRMARE NEAIVQTLNT TLEQVRERAA TCYDAGEAEV EDEGSFCGGE
201: GDGNSLPAKK MKMSSCCCNC GSNGVTRVLF LPCRHLCCCM DCEEGLLLCP ICNTPKKSRI EALIF
101: QEQRKREMEM ILRKMESKAL LLMSQKEEEM SKALNKNMEL EDLLRKMEME NQTWQRMARE NEAIVQTLNT TLEQVRERAA TCYDAGEAEV EDEGSFCGGE
201: GDGNSLPAKK MKMSSCCCNC GSNGVTRVLF LPCRHLCCCM DCEEGLLLCP ICNTPKKSRI EALIF
Arabidopsis Description
At4g35070 [Source:UniProtKB/TrEMBL;Acc:Q66GR4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.