CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH60696	Soybean	nucleus, plastid	85.02	83.56
VIT_03s0038g02450.t01	Wine grape	nucleus	40.07	53.24
PGSC0003DMT400015829	Potato	nucleus	39.37	44.84
Solyc01g111610.2.1	Tomato	cytosol	36.59	43.21
PGSC0003DMT400068728	Potato	mitochondrion, nucleus	37.98	41.29
CDY40647	Canola	cytosol	32.75	40.0
Solyc10g055560.1.1	Tomato	nucleus	37.28	39.63
Bra017691.1-P	Field mustard	cytosol, extracellular, nucleus	32.4	39.57
CDX72513	Canola	cytosol	32.06	39.32
KRH24321	Soybean	cytosol	39.37	39.24
Bra011582.1-P	Field mustard	cytosol, nucleus, plastid	29.62	38.46
CDY52651	Canola	cytosol	29.62	38.46
CDX69109	Canola	nucleus	27.18	38.05
Bra034672.1-P	Field mustard	cytosol	32.75	37.45
CDX73168	Canola	cytosol	32.75	37.45
CDY15019	Canola	cytosol	32.75	37.45
KRH29000	Soybean	cytosol	36.93	36.93
CDX76311	Canola	cytosol	32.4	36.76
CDY17506	Canola	cytosol, nucleus, plastid	32.4	36.76
KRG94235	Soybean	cytosol	31.71	36.69
AT4G35070.1	Thale cress	cytosol	33.8	36.6
KRH43767	Soybean	nucleus	21.6	24.51
KRH77271	Soybean	plastid	26.13	23.29
KRH50476	Soybean	cytosol, nucleus, plastid	25.09	22.5
KRG89416	Soybean	nucleus	24.39	22.29
KRH57556	Soybean	nucleus	27.18	22.29
KRH28216	Soybean	nucleus	25.44	22.19
KRH04275	Soybean	nucleus	27.53	22.13
KRH11729	Soybean	nucleus	23.0	21.09
KRH74575	Soybean	cytosol	24.39	20.77
KRH13682	Soybean	nucleus	24.04	20.47
KRH36722	Soybean	nucleus	21.95	20.32
KRH69583	Soybean	nucleus	23.34	19.88
KRH05668	Soybean	nucleus	18.82	15.79
KRH15376	Soybean	nucleus, plastid	19.16	15.67

Protein Annotations

EMBL:ACUP02003372	EnsemblPlants:KRH51394	EnsemblPlantsGene:GLYMA_06G003500	EntrezGene:100815248	Gene3D:3.30.40.10	InterPro:E3ligase_BOI_like
InterPro:IPR013083	InterPro:Znf_RING/FYVE/PHD	ncoils:Coil	PANTHER:PTHR42647	PANTHER:PTHR42647:SF6	PIRSF:PIRSF036836
ProteinID:KRH51394	ProteinID:KRH51394.1	SEG:seg	UniParc:UPI000233A769	UniProt:I1K6Y9	MapMan:35.1

Description

hypothetical protein

Coordinates

chr6:-:302165..303761

Molecular Weight (calculated)

33051.6 Da

IEP (calculated)

6.716

GRAVY (calculated)

-0.593

Length

287 amino acids

Sequence
(BLAST)

001: MAIEAQLFPN NAPPIPFYGS KNLMADNSQA AYGHRQQPVE QHHAWQMNQN MSLVDPNFSC FSNSNVHHYA LHKNVIQPLA SYPQSLAIVF DQQREIDHCI
101: RSQNEKLSIL LQEQRKQHVS ELLKKVEANA LHLLRQKDEE IAQATKKTTE LKEFLTRLEV ENQSWRKVAE ENEAMVLSLH NTLEEMKERA LYRVTAEDAE
201: SCWDENMRNR AMEEGTGENR LCRGGGVEEV EQIRKRTMDC KCCNSQKSCF MILPCRHLCS CKTCEPFLQV CPVCSMPKKS SIETLIV

Best Arabidopsis Sequence Match ( AT4G35070.1 )
(BLAST)

001: MAIQAQLNYN APNANQIGFG GSEFSLINNN GVIGIGNDQS YLVNNLQLQK DFNQHALFHH QHHQQQQSPS QSFLAAQMEK QKQEIDQFIK IQNERLRYVL
101: QEQRKREMEM ILRKMESKAL LLMSQKEEEM SKALNKNMEL EDLLRKMEME NQTWQRMARE NEAIVQTLNT TLEQVRERAA TCYDAGEAEV EDEGSFCGGE
201: GDGNSLPAKK MKMSSCCCNC GSNGVTRVLF LPCRHLCCCM DCEEGLLLCP ICNTPKKSRI EALIF

Arabidopsis Description

At4g35070 [Source:UniProtKB/TrEMBL;Acc:Q66GR4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.