CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
extracellular 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, extracellular, mitochondrion, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	extracellular
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH29000	Soybean	cytosol	85.48	73.87
KRH24321	Soybean	cytosol	79.84	68.75
VIT_03s0038g02450.t01	Wine grape	nucleus	31.85	36.57
CDX69109	Canola	nucleus	27.82	33.66
Solyc01g111610.2.1	Tomato	cytosol	32.66	33.33
PGSC0003DMT400015829	Potato	nucleus	33.87	33.33
KRH51394	Soybean	nucleus	36.69	31.71
KRH60696	Soybean	nucleus, plastid	37.1	31.51
Bra011582.1-P	Field mustard	cytosol, nucleus, plastid	27.82	31.22
CDY52651	Canola	cytosol	27.82	31.22
CDX72513	Canola	cytosol	29.44	31.2
CDY40647	Canola	cytosol	28.23	29.79
Bra017691.1-P	Field mustard	cytosol, extracellular, nucleus	27.82	29.36
PGSC0003DMT400068728	Potato	mitochondrion, nucleus	30.24	28.41
AT4G35070.1	Thale cress	cytosol	29.84	27.92
Solyc10g055560.1.1	Tomato	nucleus	29.84	27.41
CDY17506	Canola	cytosol, nucleus, plastid	27.82	27.27
CDY15019	Canola	cytosol	27.42	27.09
CDX73168	Canola	cytosol	27.42	27.09
Bra034672.1-P	Field mustard	cytosol	27.02	26.69
CDX76311	Canola	cytosol	27.02	26.48
KRH43767	Soybean	nucleus	20.16	19.76
KRH77271	Soybean	plastid	24.19	18.63
KRH28216	Soybean	nucleus	24.6	18.54
KRH57556	Soybean	nucleus	25.81	18.29
KRH04275	Soybean	nucleus	26.21	18.21
KRH50476	Soybean	cytosol, nucleus, plastid	22.18	17.19
KRH11729	Soybean	nucleus	21.37	16.93
KRH74575	Soybean	cytosol	22.58	16.62
KRH36722	Soybean	nucleus	20.56	16.45
KRG89416	Soybean	nucleus	20.56	16.24
KRH69583	Soybean	nucleus	21.77	16.02
KRH13682	Soybean	nucleus	20.56	15.13
KRH15376	Soybean	nucleus, plastid	21.37	15.1
KRH05668	Soybean	nucleus	20.56	14.91

Protein Annotations

EMBL:ACUP02011880	EnsemblPlants:KRG94235	EnsemblPlantsGene:GLYMA_19G070200	Gene3D:3.30.40.10	InterPro:E3ligase_BOI_like	InterPro:IPR013083
InterPro:Znf_RING/FYVE/PHD	ncoils:Coil	PANTHER:PTHR42647	PANTHER:PTHR42647:SF6	PFAM:PF13920	PIRSF:PIRSF036836
ProteinID:KRG94235	ProteinID:KRG94235.1	SUPFAM:SSF57850	UniParc:UPI0006ED74E3	UniProt:A0A0R0EIX6	MapMan:35.1

Description

hypothetical protein

Coordinates

chr19:+:22874975..22876026

Molecular Weight (calculated)

28813.3 Da

IEP (calculated)

8.159

GRAVY (calculated)

-0.517

Length

248 amino acids

Sequence
(BLAST)

001: MPYTRCIILL NPITQQMLTQ GIVDPNLHVY NSEAVNSRMF AIQLEKQWKK IDQYMKSEDE KLRYMIREHG KQHVIALLKK LKCHSLNVLR EKDEEIVQAI
101: KKKVELEDYL RKLEAENMKW QKVAQEKETM ALSLYKTLGE MTESGNFLNN GVVPNEAVSF CGETRGKEEE MGEDETLEKE KKHIECCGEF EMNMRGRGVM
201: VCKSCHSRSS SFLFLPCRHL SCRKVCNAFL EACPVCRTPK KATIELRL

Best Arabidopsis Sequence Match ( AT4G35070.2 )
(BLAST)

001: MALSESHHQQ QQSPSQSFLA AQMEKQKQEI DQFIKIQNER LRYVLQEQRK REMEMILRKM ESKALLLMSQ KEEEMSKALN KNMELEDLLR KMEMENQTWQ
101: RMARENEAIV QTLNTTLEQV RERAATCYDA GEAEVEDEGS FCGGEGDGNS LPAKKMKMSS CCCNCGSNGV TRVLFLPCRH LCCCMDCEEG LLLCPICNTP
201: KKSRIEALIF

Arabidopsis Description

At4g35070 [Source:UniProtKB/TrEMBL;Acc:Q66GR4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.