Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY15019 | Canola | cytosol | 100.0 | 100.0 |
| CDY17506 | Canola | cytosol, nucleus, plastid | 99.2 | 98.42 |
| CDX76311 | Canola | cytosol | 98.41 | 97.63 |
| Bra034672.1-P | Field mustard | cytosol | 97.61 | 97.61 |
| CDY40647 | Canola | cytosol | 76.1 | 81.28 |
| CDX72513 | Canola | cytosol | 70.92 | 76.07 |
| CDY52651 | Canola | cytosol | 66.14 | 75.11 |
| CDX69109 | Canola | nucleus | 59.76 | 73.17 |
| AT4G35070.1 | Thale cress | cytosol | 76.1 | 72.08 |
| VIT_03s0038g02450.t01 | Wine grape | nucleus | 36.65 | 42.59 |
| Solyc01g111610.2.1 | Tomato | cytosol | 37.85 | 39.09 |
| PGSC0003DMT400068728 | Potato | mitochondrion, nucleus | 41.04 | 39.02 |
| PGSC0003DMT400015829 | Potato | nucleus | 39.04 | 38.89 |
| Solyc10g055560.1.1 | Tomato | nucleus | 41.04 | 38.15 |
| KRH51394 | Soybean | nucleus | 37.45 | 32.75 |
| KRH60696 | Soybean | nucleus, plastid | 35.46 | 30.48 |
| KRH24321 | Soybean | cytosol | 33.07 | 28.82 |
| KRH29000 | Soybean | cytosol | 32.67 | 28.57 |
| CDY34127 | Canola | extracellular | 6.77 | 28.33 |
| KRG94235 | Soybean | cytosol | 27.09 | 27.42 |
| CDY09609 | Canola | cytosol | 21.91 | 22.27 |
| CDY40841 | Canola | cytosol | 25.1 | 21.07 |
| CDY07541 | Canola | cytosol | 19.52 | 20.94 |
| CDY09318 | Canola | cytosol | 19.52 | 20.94 |
| CDX94520 | Canola | cytosol | 19.52 | 20.94 |
| CDY21311 | Canola | cytosol | 19.52 | 20.94 |
| CDY43447 | Canola | nucleus | 25.1 | 20.86 |
| CDX77733 | Canola | nucleus | 24.7 | 20.67 |
| CDY26402 | Canola | cytosol | 24.3 | 20.61 |
| CDY33511 | Canola | nucleus | 24.7 | 20.46 |
| CDY17103 | Canola | cytosol | 23.9 | 20.27 |
| CDX87407 | Canola | nucleus | 25.5 | 20.25 |
| CDX88507 | Canola | nucleus | 23.9 | 20.13 |
| CDY24237 | Canola | nucleus | 25.9 | 20.06 |
| CDY06767 | Canola | cytosol | 23.9 | 19.74 |
| CDX79294 | Canola | nucleus | 23.9 | 19.74 |
| CDY43390 | Canola | cytosol | 25.5 | 19.69 |
| CDY17048 | Canola | cytosol | 24.3 | 19.61 |
| CDY51856 | Canola | cytosol | 23.51 | 19.47 |
| CDX90458 | Canola | cytosol | 23.51 | 19.41 |
| CDY37172 | Canola | cytosol | 23.11 | 19.21 |
| CDY01615 | Canola | cytosol | 23.11 | 19.02 |
| CDY13070 | Canola | cytosol | 21.12 | 19.0 |
| CDY03162 | Canola | cytosol | 24.3 | 18.94 |
| CDY71192 | Canola | cytosol | 21.12 | 18.93 |
| CDY18062 | Canola | cytosol | 21.12 | 18.79 |
| CDY46345 | Canola | cytosol | 21.12 | 18.79 |
| CDY71607 | Canola | cytosol | 22.71 | 18.63 |
| CDY51918 | Canola | cytosol | 21.12 | 18.47 |
| CDX82568 | Canola | nucleus | 23.9 | 17.65 |
| CDY64561 | Canola | nucleus | 23.51 | 17.35 |
| CDX93396 | Canola | cytosol | 21.12 | 15.77 |
| CDY20611 | Canola | nucleus | 21.12 | 15.54 |
| CDY37958 | Canola | cytosol, plastid | 20.72 | 15.34 |
| CDY24542 | Canola | nucleus | 19.92 | 15.29 |
| CDY20963 | Canola | nucleus | 20.32 | 15.09 |
| CDY23552 | Canola | cytosol | 9.96 | 11.52 |
Protein Annotations
| EnsemblPlants:CDX73168 | EnsemblPlantsGene:GSBRNA2T00103654001 | Gene3D:3.30.40.10 | InterPro:E3ligase_BOI_like | InterPro:IPR013083 | InterPro:Znf_RING/FYVE/PHD |
| ncoils:Coil | PANTHER:PTHR42647 | PANTHER:PTHR42647:SF6 | PIRSF:PIRSF036836 | ProteinID:CDX73168 | ProteinID:CDX73168.1 |
| ProteinID:CDY15019.1 | SEG:seg | UniParc:UPI0004EE57F1 | UniProt:A0A078FQ90 | MapMan:35.1 | : |
Description
BnaC06g36160DBnaC06g36160D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FQ90]
Coordinates
chrLK031797:-:2430220..2431185
Molecular Weight (calculated)
28553.1 Da
IEP (calculated)
6.243
GRAVY (calculated)
-0.588
Length
251 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIQAQLHYN ASNVNQIGTG GSLLNNNGGI GIDQSYTNNH NLLAQKDLNQ HALFQHQQYR SQSVLDAYME RQKQEIDQFI RVQNERLRYA LQEQRKQEME
101: TMLRKMEAKA LVLMTRKEEE MSRALSKNME LEDLLRKMEM ENQTWQRLAR ENEAMVATLN STLEQARERA AAATCHNEAM AVEDEGSCCG GDDFPAKKVS
201: SCCWNCGSNG ETRVLFLPCR HLCCCTGCED GLVLCPMCSA PKKNRIEAFI F
101: TMLRKMEAKA LVLMTRKEEE MSRALSKNME LEDLLRKMEM ENQTWQRLAR ENEAMVATLN STLEQARERA AAATCHNEAM AVEDEGSCCG GDDFPAKKVS
201: SCCWNCGSNG ETRVLFLPCR HLCCCTGCED GLVLCPMCSA PKKNRIEAFI F
001: MAIQAQLNYN APNANQIGFG GSEFSLINNN GVIGIGNDQS YLVNNLQLQK DFNQHALFHH QHHQQQQSPS QSFLAAQMEK QKQEIDQFIK IQNERLRYVL
101: QEQRKREMEM ILRKMESKAL LLMSQKEEEM SKALNKNMEL EDLLRKMEME NQTWQRMARE NEAIVQTLNT TLEQVRERAA TCYDAGEAEV EDEGSFCGGE
201: GDGNSLPAKK MKMSSCCCNC GSNGVTRVLF LPCRHLCCCM DCEEGLLLCP ICNTPKKSRI EALIF
101: QEQRKREMEM ILRKMESKAL LLMSQKEEEM SKALNKNMEL EDLLRKMEME NQTWQRMARE NEAIVQTLNT TLEQVRERAA TCYDAGEAEV EDEGSFCGGE
201: GDGNSLPAKK MKMSSCCCNC GSNGVTRVLF LPCRHLCCCM DCEEGLLLCP ICNTPKKSRI EALIF
Arabidopsis Description
At4g35070 [Source:UniProtKB/TrEMBL;Acc:Q66GR4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.