Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra017511.1-P | Field mustard | nucleus | 99.01 | 99.01 |
| CDY03162 | Canola | cytosol | 95.7 | 89.75 |
| CDY33511 | Canola | nucleus | 79.8 | 79.54 |
| CDX77733 | Canola | nucleus | 78.81 | 79.33 |
| CDY37172 | Canola | cytosol | 75.17 | 75.17 |
| AT5G47050.1 | Thale cress | nucleus | 74.5 | 75.0 |
| CDY51856 | Canola | cytosol | 73.84 | 73.6 |
| CDY09609 | Canola | cytosol | 48.68 | 59.51 |
| CDX90458 | Canola | cytosol | 56.95 | 56.58 |
| KRH77271 | Soybean | plastid | 47.02 | 44.1 |
| VIT_02s0012g00290.t01 | Wine grape | cytosol, nucleus, plastid | 48.34 | 43.32 |
| KRH28216 | Soybean | nucleus | 47.02 | 43.16 |
| Solyc06g061020.2.1 | Tomato | nucleus | 47.02 | 42.9 |
| Solyc08g077460.2.1 | Tomato | nucleus | 48.34 | 41.95 |
| PGSC0003DMT400004642 | Potato | nucleus | 48.01 | 41.91 |
| CDY34127 | Canola | extracellular | 8.28 | 41.67 |
| Solyc08g007120.2.1 | Tomato | nucleus | 45.36 | 41.39 |
| PGSC0003DMT400068387 | Potato | nucleus | 46.69 | 41.23 |
| KRH04275 | Soybean | nucleus | 47.68 | 40.34 |
| KRH57556 | Soybean | nucleus | 45.7 | 39.43 |
| PGSC0003DMT400052841 | Potato | nucleus | 45.03 | 38.97 |
| GSMUA_Achr1P00560_001 | Banana | nucleus | 34.11 | 35.64 |
| GSMUA_Achr2P12040_001 | Banana | plastid | 31.13 | 34.94 |
| GSMUA_Achr4P30100_001 | Banana | plastid | 34.77 | 34.43 |
| Os02t0687500-01 | Rice | cytosol, nucleus, plastid | 36.09 | 34.28 |
| GSMUA_Achr2P18250_001 | Banana | nucleus | 37.09 | 33.94 |
| GSMUA_Achr8P14860_001 | Banana | nucleus | 37.09 | 33.23 |
| TraesCS6D01G243000.1 | Wheat | cytosol | 35.76 | 32.34 |
| TraesCS6B01G289500.1 | Wheat | nucleus | 35.76 | 31.95 |
| GSMUA_Achr4P21690_001 | Banana | nucleus | 33.77 | 31.48 |
| Os10t0565500-01 | Rice | nucleus | 36.42 | 31.34 |
| TraesCS6A01G262200.1 | Wheat | nucleus | 35.1 | 31.18 |
| HORVU6Hr1G066640.4 | Barley | nucleus | 35.1 | 30.9 |
| Zm00001d047069_P001 | Maize | cytosol | 33.77 | 30.72 |
| TraesCS1D01G217800.1 | Wheat | cytosol | 32.45 | 30.53 |
| TraesCS1B01G228800.1 | Wheat | cytosol | 32.45 | 30.06 |
| TraesCS1A01G215300.1 | Wheat | cytosol | 32.12 | 29.94 |
| Zm00001d017649_P001 | Maize | plastid | 32.78 | 29.91 |
| EES05709 | Sorghum | nucleus | 34.77 | 29.75 |
| KXG38894 | Sorghum | cytosol, mitochondrion, nucleus | 34.11 | 29.6 |
| Zm00001d051484_P001 | Maize | nucleus, plastid | 34.44 | 29.46 |
| HORVU1Hr1G054930.3 | Barley | cytosol | 31.46 | 28.96 |
| Zm00001d029988_P001 | Maize | cytosol, mitochondrion, nucleus | 31.79 | 28.57 |
| CDY37958 | Canola | cytosol, plastid | 30.46 | 27.14 |
| CDX93396 | Canola | cytosol | 30.13 | 27.08 |
| CDY52651 | Canola | cytosol | 19.54 | 26.7 |
| CDX72513 | Canola | cytosol | 20.2 | 26.07 |
| CDY17103 | Canola | cytosol | 25.5 | 26.01 |
| CDY40647 | Canola | cytosol | 20.2 | 25.96 |
| CDY20611 | Canola | nucleus | 29.14 | 25.81 |
| CDY20963 | Canola | nucleus | 28.81 | 25.74 |
| CDY24542 | Canola | nucleus | 27.81 | 25.69 |
| CDX94520 | Canola | cytosol | 19.87 | 25.64 |
| CDY09318 | Canola | cytosol | 19.87 | 25.64 |
| CDY21311 | Canola | cytosol | 19.87 | 25.64 |
| CDY07541 | Canola | cytosol | 19.87 | 25.64 |
| CDX69109 | Canola | nucleus | 17.22 | 25.37 |
| CDY06767 | Canola | cytosol | 25.5 | 25.33 |
| CDX73168 | Canola | cytosol | 20.86 | 25.1 |
| CDY15019 | Canola | cytosol | 20.86 | 25.1 |
| CDX76311 | Canola | cytosol | 20.86 | 24.9 |
| CDY17506 | Canola | cytosol, nucleus, plastid | 20.53 | 24.51 |
| CDY40841 | Canola | cytosol | 23.51 | 23.75 |
| CDY01615 | Canola | cytosol | 23.51 | 23.28 |
| CDY71607 | Canola | cytosol | 23.51 | 23.2 |
| CDY17048 | Canola | cytosol | 23.84 | 23.15 |
| CDX88507 | Canola | nucleus | 22.52 | 22.82 |
| CDX87407 | Canola | nucleus | 23.84 | 22.78 |
| CDY51918 | Canola | cytosol | 21.52 | 22.65 |
| CDY26402 | Canola | cytosol | 22.19 | 22.64 |
| CDX79294 | Canola | nucleus | 22.52 | 22.37 |
| CDY43390 | Canola | cytosol | 23.18 | 21.54 |
| CDY24237 | Canola | nucleus | 22.85 | 21.3 |
| CDY64561 | Canola | nucleus | 22.52 | 20.0 |
| CDX82568 | Canola | nucleus | 22.19 | 19.71 |
| CDY13070 | Canola | cytosol | 17.88 | 19.35 |
| CDY71192 | Canola | cytosol | 17.88 | 19.29 |
| CDY46345 | Canola | cytosol | 17.55 | 18.79 |
| CDY18062 | Canola | cytosol | 16.89 | 18.09 |
| CDY23552 | Canola | cytosol | 9.6 | 13.36 |
Protein Annotations
| KEGG:00220+6.3.2.- | KEGG:00261+6.3.2.- | KEGG:00380+6.3.2.- | Gene3D:3.30.40.10 | MapMan:35.1 | GO:A0A078I006 |
| UniProt:A0A078I006 | EnsemblPlants:CDY43447 | ProteinID:CDY43447 | ProteinID:CDY43447.1 | ncoils:Coil | InterPro:E3ligase_BOI_like |
| EnsemblPlantsGene:GSBRNA2T00076674001 | InterPro:IPR001841 | InterPro:IPR013083 | PFAM:PF13920 | PIRSF:PIRSF036836 | PFscan:PS50089 |
| PANTHER:PTHR42647 | PANTHER:PTHR42647:SF13 | UniPathway:UPA00144 | UniParc:UPI0004EDE533 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD |
| SEG:seg | : | : | : | : | : |
Description
BnaAnng07190DBnaAnng07190D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I006]
Coordinates
chrLK032557:-:131849..133111
Molecular Weight (calculated)
33648.9 Da
IEP (calculated)
7.960
GRAVY (calculated)
-0.609
Length
302 amino acids
Sequence
(BLAST)
(BLAST)
001: MALQAHHHPS TMFFLNRNGQ EGTDFSPDLQ KSQLPSITAG VDKRKRARED YSVSDLETTA APMNPPPCTP PQFISRRQTP NVVSTGLRLS QGQSQSIEQR
101: SSSSPMIDGN FAGEINRQAD ELDRFLQTQG EQLRCMLADS RERHYRELLR TREESVRRRL GEKEAEMEKA TRRHAELEAR AAQIEKEARA WQVRAAAKEA
201: EAMSLQARLQ QVVAHGGGVT AAEPKLKSVD GVDEAGDAES VYVDPDRFEL NGPSCRICRR RAATVLALPC RHLVLCKGCD GSVRVCPLCL SLKNSSVEVF
301: FF
101: SSSSPMIDGN FAGEINRQAD ELDRFLQTQG EQLRCMLADS RERHYRELLR TREESVRRRL GEKEAEMEKA TRRHAELEAR AAQIEKEARA WQVRAAAKEA
201: EAMSLQARLQ QVVAHGGGVT AAEPKLKSVD GVDEAGDAES VYVDPDRFEL NGPSCRICRR RAATVLALPC RHLVLCKGCD GSVRVCPLCL SLKNSSVEVF
301: FF
001: MAVQAHHHPS TLFFLNNGQE GNDQPHKSQF HSINAGVDTR KRAREVSSVI DLDITAAPMN PPPQTPPQVI GRRQNPNVVS TGLRLSREQS QNQEQRFLSF
101: PITGDVAGEI KSQTDELNRF LQIQGEQLKR MLAENSERNY RELLRTTEES VRRRLREKEA EIEKATRRHV ELEARATQIE TEARAWQMRA AAREAEATSL
201: QAQLHQAVVV AHGGGVITTV EPQSGSVDGV DEAEDAESAY VDPDRVEMIG PGCRICRRRS ATVLALPCRH LVMCTECDGS VRICPLCLST KNSSVEVFYS
101: PITGDVAGEI KSQTDELNRF LQIQGEQLKR MLAENSERNY RELLRTTEES VRRRLREKEA EIEKATRRHV ELEARATQIE TEARAWQMRA AAREAEATSL
201: QAQLHQAVVV AHGGGVITTV EPQSGSVDGV DEAEDAESAY VDPDRVEMIG PGCRICRRRS ATVLALPCRH LVMCTECDGS VRICPLCLST KNSSVEVFYS
Arabidopsis Description
SBP (S-ribonuclease binding protein) family protein [Source:UniProtKB/TrEMBL;Acc:Q9FJQ8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.