Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra014051.1-P | Field mustard | nucleus | 99.04 | 99.04 |
| CDY40841 | Canola | cytosol | 91.64 | 95.32 |
| CDY17103 | Canola | cytosol | 76.85 | 80.74 |
| CDY06767 | Canola | cytosol | 78.14 | 79.93 |
| AT1G45976.1 | Thale cress | cytosol | 79.74 | 76.31 |
| KRH05668 | Soybean | nucleus | 62.7 | 57.02 |
| Solyc04g078760.2.1 | Tomato | nucleus | 61.41 | 56.51 |
| KRH15376 | Soybean | nucleus, plastid | 62.7 | 55.56 |
| VIT_18s0001g10370.t01 | Wine grape | nucleus | 58.52 | 55.49 |
| PGSC0003DMT400020551 | Potato | nucleus | 61.41 | 51.07 |
| GSMUA_Achr10P... | Banana | nucleus | 48.23 | 47.17 |
| GSMUA_Achr6P10180_001 | Banana | plastid | 48.55 | 43.52 |
| Zm00001d047856_P001 | Maize | nucleus, plastid | 45.34 | 42.86 |
| EER95135 | Sorghum | plastid | 46.3 | 42.73 |
| Os03t0263800-01 | Rice | nucleus, plastid | 46.95 | 42.69 |
| GSMUA_Achr11P... | Banana | nucleus | 50.8 | 42.25 |
| Zm00001d028532_P001 | Maize | nucleus, plastid | 45.34 | 41.84 |
| TraesCS4A01G089200.1 | Wheat | plastid | 45.34 | 41.59 |
| TraesCS4B01G215100.1 | Wheat | plastid | 45.02 | 41.3 |
| TraesCS4D01G215600.1 | Wheat | plastid | 45.02 | 41.3 |
| CDY34127 | Canola | extracellular | 7.07 | 36.67 |
| HORVU4Hr1G061210.1 | Barley | cytosol | 45.66 | 34.38 |
| CDX93396 | Canola | cytosol | 30.87 | 28.57 |
| CDY24542 | Canola | nucleus | 28.94 | 27.52 |
| CDY37958 | Canola | cytosol, plastid | 29.9 | 27.43 |
| CDX69109 | Canola | nucleus | 17.68 | 26.83 |
| CDY09609 | Canola | cytosol | 20.58 | 25.91 |
| CDY20611 | Canola | nucleus | 28.3 | 25.81 |
| CDX72513 | Canola | cytosol | 19.29 | 25.64 |
| CDY20963 | Canola | nucleus | 27.65 | 25.44 |
| CDY40647 | Canola | cytosol | 18.97 | 25.11 |
| CDY33511 | Canola | nucleus | 24.44 | 25.08 |
| CDX77733 | Canola | nucleus | 24.12 | 25.0 |
| CDY52651 | Canola | cytosol | 17.68 | 24.89 |
| CDY15019 | Canola | cytosol | 19.61 | 24.3 |
| CDX73168 | Canola | cytosol | 19.61 | 24.3 |
| CDX76311 | Canola | cytosol | 19.61 | 24.11 |
| CDY43447 | Canola | nucleus | 23.15 | 23.84 |
| CDY51856 | Canola | cytosol | 23.15 | 23.76 |
| CDY17506 | Canola | cytosol, nucleus, plastid | 19.29 | 23.72 |
| CDX88507 | Canola | nucleus | 22.19 | 23.15 |
| CDY09318 | Canola | cytosol | 17.36 | 23.08 |
| CDY07541 | Canola | cytosol | 17.36 | 23.08 |
| CDY21311 | Canola | cytosol | 17.36 | 23.08 |
| CDX94520 | Canola | cytosol | 17.36 | 23.08 |
| CDY37172 | Canola | cytosol | 22.19 | 22.85 |
| CDX87407 | Canola | nucleus | 22.83 | 22.47 |
| CDY03162 | Canola | cytosol | 23.15 | 22.36 |
| CDX90458 | Canola | cytosol | 21.54 | 22.04 |
| CDY24237 | Canola | nucleus | 22.83 | 21.91 |
| CDX79294 | Canola | nucleus | 20.9 | 21.38 |
| CDY43390 | Canola | cytosol | 22.19 | 21.23 |
| CDX82568 | Canola | nucleus | 23.15 | 21.18 |
| CDY64561 | Canola | nucleus | 23.15 | 21.18 |
| CDY26402 | Canola | cytosol | 19.61 | 20.61 |
| CDY51918 | Canola | cytosol | 18.97 | 20.56 |
| CDY13070 | Canola | cytosol | 17.36 | 19.35 |
| CDY01615 | Canola | cytosol | 18.97 | 19.34 |
| CDY71192 | Canola | cytosol | 17.36 | 19.29 |
| CDY71607 | Canola | cytosol | 18.97 | 19.28 |
| CDY18062 | Canola | cytosol | 17.36 | 19.15 |
| CDY46345 | Canola | cytosol | 17.04 | 18.79 |
| CDY23552 | Canola | cytosol | 10.61 | 15.21 |
Protein Annotations
| Gene3D:3.30.40.10 | MapMan:35.1 | GO:A0A078FXH7 | UniProt:A0A078FXH7 | EnsemblPlants:CDY17048 | ProteinID:CDY17048 |
| ProteinID:CDY17048.1 | ncoils:Coil | InterPro:E3ligase_BOI_like | EnsemblPlantsGene:GSBRNA2T00095025001 | InterPro:IPR001841 | InterPro:IPR013083 |
| PFAM:PF13920 | PIRSF:PIRSF036836 | PFscan:PS50089 | PANTHER:PTHR42647 | PANTHER:PTHR42647:SF10 | UniParc:UPI0004EE66AC |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | : | : | : | : |
Description
BnaA08g04120DBnaA08g04120D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FXH7]
Coordinates
chrLK032069:-:576174..577626
Molecular Weight (calculated)
35152.9 Da
IEP (calculated)
4.852
GRAVY (calculated)
-0.480
Length
311 amino acids
Sequence
(BLAST)
(BLAST)
001: MALPHHFDPH LQDSKSFRDF CGIDGQISPP ALGFESSTNL HEHPPYIPPF HVPGFAPGPA LQTDGADVGA GFEWNGIYGR KSLKEMDFME NNSQLSSVDF
101: WQGRSVSTGL GLSLDNANGS ALLSLVGDDV DRELLRQDSE IDRFIKIQGD QLRQSILEKI QTSQRKTVSL MEERVIQKLR GKDEELEMIN RKNKELEVRI
201: EQLTLEAEAW QQRANYNENM IAALNYNLER AHGWPRESNM EEGCGDSELD DTASCFNGKA TMMMCRFCGV REVCMLLLPC KHMCLCKECE RKLSSCPLCQ
301: SSKFLGMEVY M
101: WQGRSVSTGL GLSLDNANGS ALLSLVGDDV DRELLRQDSE IDRFIKIQGD QLRQSILEKI QTSQRKTVSL MEERVIQKLR GKDEELEMIN RKNKELEVRI
201: EQLTLEAEAW QQRANYNENM IAALNYNLER AHGWPRESNM EEGCGDSELD DTASCFNGKA TMMMCRFCGV REVCMLLLPC KHMCLCKECE RKLSSCPLCQ
301: SSKFLGMEVY M
001: MALHPHLQDS KNFRDFCGID GQISPELGFN RSENLHDQSQ HPPYIPPFHV AGFAPGPVVQ IDGSDGGNGA DFEWNYGLGL EPRRERIKEQ DFLENNSQIS
101: SIDFLQARSV STGLGLSLDN ARVASSDGSA LLSLVGDDID RELQRQDADI DRFLKIQGDQ LRHAILDKIK RGQQKTVSLM EEKVVQKLRE KDEELERINR
201: KNKELEVRME QLTMEAEAWQ QRAKYNENMI AALNYNLDRA QGRPRDSIEG CGDSEVDDTA SCFNGRDNSN NNTKTMMMCR FCGVREMCML LLPCNHMCLC
301: KECERKLSSC PLCQSSKFLG MEVYM
101: SIDFLQARSV STGLGLSLDN ARVASSDGSA LLSLVGDDID RELQRQDADI DRFLKIQGDQ LRHAILDKIK RGQQKTVSLM EEKVVQKLRE KDEELERINR
201: KNKELEVRME QLTMEAEAWQ QRAKYNENMI AALNYNLDRA QGRPRDSIEG CGDSEVDDTA SCFNGRDNSN NNTKTMMMCR FCGVREMCML LLPCNHMCLC
301: KECERKLSSC PLCQSSKFLG MEVYM
Arabidopsis Description
SBP1SBP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WK23]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.