CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, plastid

Predictor Summary:

extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1
plastid 2
cytosol 1
mitochondrion 3
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	mitochondrion
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH05668	Soybean	nucleus	92.88	95.32
VIT_18s0001g10370.t01	Wine grape	nucleus	68.38	73.17
Solyc04g078760.2.1	Tomato	nucleus	67.52	70.12
AT1G45976.1	Thale cress	cytosol	60.4	65.23
Bra040255.1-P	Field mustard	nucleus	42.45	65.07
CDY40841	Canola	cytosol	54.99	64.55
PGSC0003DMT400020551	Potato	nucleus	67.81	63.64
CDY17103	Canola	cytosol	53.56	63.51
CDY06767	Canola	cytosol	54.7	63.16
CDY17048	Canola	cytosol	55.56	62.7
Bra014051.1-P	Field mustard	nucleus	54.99	62.06
GSMUA_Achr10P...	Banana	nucleus	51.85	57.23
GSMUA_Achr6P10180_001	Banana	plastid	53.28	53.89
Zm00001d047856_P001	Maize	nucleus, plastid	49.57	52.89
Os03t0263800-01	Rice	nucleus, plastid	51.0	52.34
EER95135	Sorghum	plastid	50.14	52.23
Zm00001d028532_P001	Maize	nucleus, plastid	49.0	51.04
TraesCS4A01G089200.1	Wheat	plastid	49.29	51.03
TraesCS4B01G215100.1	Wheat	plastid	49.0	50.74
TraesCS4D01G215600.1	Wheat	plastid	49.0	50.74
GSMUA_Achr11P...	Banana	nucleus	52.14	48.93
HORVU4Hr1G061210.1	Barley	cytosol	49.0	41.65
KRH69583	Soybean	nucleus	31.62	32.94
KRH74575	Soybean	cytosol	30.77	32.05
KRH43767	Soybean	nucleus	19.94	27.67
KRH77271	Soybean	plastid	24.22	26.4
KRH28216	Soybean	nucleus	24.22	25.84
KRH57556	Soybean	nucleus	24.22	24.29
KRH04275	Soybean	nucleus	23.65	23.25
KRH36722	Soybean	nucleus	20.23	22.9
KRH11729	Soybean	nucleus	19.94	22.36
KRH50476	Soybean	cytosol, nucleus, plastid	20.23	22.19
KRH13682	Soybean	nucleus	20.8	21.66
KRG94235	Soybean	cytosol	15.1	21.37
KRG89416	Soybean	nucleus	19.09	21.34
KRH24321	Soybean	cytosol	16.52	20.14
KRH60696	Soybean	nucleus, plastid	16.24	19.52
KRH29000	Soybean	cytosol	15.95	19.51
KRH51394	Soybean	nucleus	15.67	19.16

Protein Annotations

EntrezGene:100783373	Gene3D:3.30.40.10	MapMan:35.1	EMBL:ACUP02008581	EMBL:BT094594	UniProt:C6TAQ3
ncoils:Coil	InterPro:E3ligase_BOI_like	EnsemblPlantsGene:GLYMA_14G083900	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001841	InterPro:IPR013083	EnsemblPlants:KRH15376	ProteinID:KRH15376	ProteinID:KRH15376.1	PFAM:PF13920
PIRSF:PIRSF036836	PFscan:PS50089	PANTHER:PTHR42647	PANTHER:PTHR42647:SF10	UniParc:UPI0001B16321	InterPro:Znf_RING
InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr14:-:7370009..7373267

Molecular Weight (calculated)

40158.5 Da

IEP (calculated)

4.935

GRAVY (calculated)

-0.696

Length

351 amino acids

Sequence
(BLAST)

001: MAFPQHHFQR HYQSQQQQQQ QQQQQQQQPQ TKNFRNLQTI DGQMSQQVAF YNPTDLQEQS QHPPYIPPFH VVGFAPGPVP PADGSDGGVD LQLQWNYGLE
101: PERKRLKEQD FLENNSQISS VDFLQPRSVS TGLGLSLDNT HLTSTGDSAL LSLIGDDIKC ELQQQDVEID RFLKVQGERL RQAVLEKVQA TQLQSVSLIE
201: DKVLQKLREK EAEVESINKR NMELEDRMEQ LTVEAGTWQQ RARYNENMIS ALKFNLQQAY VQSRDSKEGC GDSEVDDTAS CCNGRSLDFH LLSRENTDMK
301: EMMTCKACRV NEVTMVLLPC KHLCLCKDCE SKLSFCPLCQ SSKFIGMEVY M

Best Arabidopsis Sequence Match ( AT1G45976.1 )
(BLAST)

001: MALHPHLQDS KNFRDFCGID GQISPELGFN RSENLHDQSQ HPPYIPPFHV AGFAPGPVVQ IDGSDGGNGA DFEWNYGLGL EPRRERIKEQ DFLENNSQIS
101: SIDFLQARSV STGLGLSLDN ARVASSDGSA LLSLVGDDID RELQRQDADI DRFLKIQGDQ LRHAILDKIK RGQQKTVSLM EEKVVQKLRE KDEELERINR
201: KNKELEVRME QLTMEAEAWQ QRAKYNENMI AALNYNLDRA QGRPRDSIEG CGDSEVDDTA SCFNGRDNSN NNTKTMMMCR FCGVREMCML LLPCNHMCLC
301: KECERKLSSC PLCQSSKFLG MEVYM

Arabidopsis Description

SBP1SBP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WK23]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.