Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY17048 | Canola | cytosol | 95.32 | 91.64 |
| CDY17103 | Canola | cytosol | 77.93 | 78.72 |
| CDY06767 | Canola | cytosol | 78.93 | 77.63 |
| AT1G45976.1 | Thale cress | cytosol | 81.27 | 74.77 |
| KRH05668 | Soybean | nucleus | 64.21 | 56.14 |
| KRH15376 | Soybean | nucleus, plastid | 64.55 | 54.99 |
| Solyc04g078760.2.1 | Tomato | nucleus | 60.87 | 53.85 |
| VIT_18s0001g10370.t01 | Wine grape | nucleus | 58.19 | 53.05 |
| PGSC0003DMT400020551 | Potato | nucleus | 60.87 | 48.66 |
| GSMUA_Achr10P... | Banana | nucleus | 51.17 | 48.11 |
| GSMUA_Achr6P10180_001 | Banana | plastid | 50.5 | 43.52 |
| GSMUA_Achr11P... | Banana | nucleus | 52.51 | 41.98 |
| Zm00001d047856_P001 | Maize | nucleus, plastid | 45.82 | 41.64 |
| EER95135 | Sorghum | plastid | 46.82 | 41.54 |
| Os03t0263800-01 | Rice | nucleus, plastid | 47.49 | 41.52 |
| Zm00001d028532_P001 | Maize | nucleus, plastid | 45.82 | 40.65 |
| TraesCS4A01G089200.1 | Wheat | plastid | 45.82 | 40.41 |
| TraesCS4D01G215600.1 | Wheat | plastid | 45.48 | 40.12 |
| TraesCS4B01G215100.1 | Wheat | plastid | 45.48 | 40.12 |
| CDY34127 | Canola | extracellular | 7.36 | 36.67 |
| HORVU4Hr1G061210.1 | Barley | cytosol | 46.15 | 33.41 |
| CDX93396 | Canola | cytosol | 31.44 | 27.98 |
| CDX69109 | Canola | nucleus | 19.06 | 27.8 |
| CDY24542 | Canola | nucleus | 29.43 | 26.91 |
| CDY37958 | Canola | cytosol, plastid | 30.43 | 26.84 |
| CDY09609 | Canola | cytosol | 22.07 | 26.72 |
| CDX72513 | Canola | cytosol | 20.74 | 26.5 |
| CDY40647 | Canola | cytosol | 20.4 | 25.96 |
| CDY52651 | Canola | cytosol | 19.06 | 25.79 |
| CDY20611 | Canola | nucleus | 29.1 | 25.51 |
| CDY20963 | Canola | nucleus | 28.43 | 25.15 |
| CDX73168 | Canola | cytosol | 21.07 | 25.1 |
| CDY15019 | Canola | cytosol | 21.07 | 25.1 |
| CDX76311 | Canola | cytosol | 21.07 | 24.9 |
| CDY17506 | Canola | cytosol, nucleus, plastid | 20.74 | 24.51 |
| CDY33511 | Canola | nucleus | 24.75 | 24.42 |
| CDX77733 | Canola | nucleus | 24.41 | 24.33 |
| CDY43447 | Canola | nucleus | 23.75 | 23.51 |
| CDY51856 | Canola | cytosol | 23.75 | 23.43 |
| CDX88507 | Canola | nucleus | 22.74 | 22.82 |
| CDX90458 | Canola | cytosol | 23.08 | 22.7 |
| CDY21311 | Canola | cytosol | 17.73 | 22.65 |
| CDX94520 | Canola | cytosol | 17.73 | 22.65 |
| CDY07541 | Canola | cytosol | 17.73 | 22.65 |
| CDY09318 | Canola | cytosol | 17.73 | 22.65 |
| CDY37172 | Canola | cytosol | 22.74 | 22.52 |
| CDX87407 | Canola | nucleus | 23.41 | 22.15 |
| CDY03162 | Canola | cytosol | 23.75 | 22.05 |
| CDY24237 | Canola | nucleus | 23.75 | 21.91 |
| CDY43390 | Canola | cytosol | 23.08 | 21.23 |
| CDX79294 | Canola | nucleus | 21.4 | 21.05 |
| CDY64561 | Canola | nucleus | 23.08 | 20.29 |
| CDX82568 | Canola | nucleus | 23.08 | 20.29 |
| CDY26402 | Canola | cytosol | 19.73 | 19.93 |
| CDY51918 | Canola | cytosol | 19.06 | 19.86 |
| CDY13070 | Canola | cytosol | 17.73 | 19.0 |
| CDY71192 | Canola | cytosol | 17.73 | 18.93 |
| CDY01615 | Canola | cytosol | 19.06 | 18.69 |
| CDY71607 | Canola | cytosol | 19.06 | 18.63 |
| CDY18062 | Canola | cytosol | 17.39 | 18.44 |
| CDY46345 | Canola | cytosol | 16.72 | 17.73 |
| CDY23552 | Canola | cytosol | 10.7 | 14.75 |
Protein Annotations
| EnsemblPlants:CDY40841 | EnsemblPlantsGene:GSBRNA2T00071793001 | Gene3D:3.30.40.10 | GO:A0A078HSX4 | InterPro:E3ligase_BOI_like | InterPro:IPR001841 |
| InterPro:IPR013083 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | ncoils:Coil | PANTHER:PTHR42647 | PANTHER:PTHR42647:SF10 |
| PFAM:PF13920 | PFscan:PS50089 | PIRSF:PIRSF036836 | ProteinID:CDY40841 | ProteinID:CDY40841.1 | UniParc:UPI0004EDB84D |
| UniProt:A0A078HSX4 | MapMan:35.1 | : | : | : | : |
Description
BnaC08g04750DBnaC08g04750D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HSX4]
Coordinates
chrLK032481:+:32423..33969
Molecular Weight (calculated)
33744.4 Da
IEP (calculated)
5.003
GRAVY (calculated)
-0.429
Length
299 amino acids
Sequence
(BLAST)
(BLAST)
001: MALPHHFRDF CGIDGQISPA LGFESSANLH EHPPYIPPFH VPGFAPGPVL QTDGSDVGAG FEWNSIYGRK SLKEMDFMEN NSQLSSIDFW QGRSVSTGLG
101: LSLDNANGSA LLSLVGDDVD QELLRQDSEI DRFIKIQGDQ LRHAILEKIQ KSQHKTVSLM EERVIQKLRG KDEELEMINR KNKELEVQIE QLTLEAETWQ
201: QRANYNENMI AALNYNLERA HGRPRESNME GCGDSELDDA ASCFNGKATM MMCRFCGVRE VCMLLLPCKH MCLCKECERK LSSCPLCQSS KFLGMEVYM
101: LSLDNANGSA LLSLVGDDVD QELLRQDSEI DRFIKIQGDQ LRHAILEKIQ KSQHKTVSLM EERVIQKLRG KDEELEMINR KNKELEVQIE QLTLEAETWQ
201: QRANYNENMI AALNYNLERA HGRPRESNME GCGDSELDDA ASCFNGKATM MMCRFCGVRE VCMLLLPCKH MCLCKECERK LSSCPLCQSS KFLGMEVYM
001: MALHPHLQDS KNFRDFCGID GQISPELGFN RSENLHDQSQ HPPYIPPFHV AGFAPGPVVQ IDGSDGGNGA DFEWNYGLGL EPRRERIKEQ DFLENNSQIS
101: SIDFLQARSV STGLGLSLDN ARVASSDGSA LLSLVGDDID RELQRQDADI DRFLKIQGDQ LRHAILDKIK RGQQKTVSLM EEKVVQKLRE KDEELERINR
201: KNKELEVRME QLTMEAEAWQ QRAKYNENMI AALNYNLDRA QGRPRDSIEG CGDSEVDDTA SCFNGRDNSN NNTKTMMMCR FCGVREMCML LLPCNHMCLC
301: KECERKLSSC PLCQSSKFLG MEVYM
101: SIDFLQARSV STGLGLSLDN ARVASSDGSA LLSLVGDDID RELQRQDADI DRFLKIQGDQ LRHAILDKIK RGQQKTVSLM EEKVVQKLRE KDEELERINR
201: KNKELEVRME QLTMEAEAWQ QRAKYNENMI AALNYNLDRA QGRPRDSIEG CGDSEVDDTA SCFNGRDNSN NNTKTMMMCR FCGVREMCML LLPCNHMCLC
301: KECERKLSSC PLCQSSKFLG MEVYM
Arabidopsis Description
SBP1SBP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WK23]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.