Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039354.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| CDY24237 | Canola | nucleus | 95.69 | 95.99 |
| CDY23552 | Canola | cytosol | 53.23 | 79.72 |
| AT3G12920.1 | Thale cress | nucleus | 80.62 | 78.21 |
| CDX82568 | Canola | nucleus | 80.31 | 76.76 |
| CDY64561 | Canola | nucleus | 78.77 | 75.29 |
| VIT_19s0027g00740.t01 | Wine grape | nucleus | 44.31 | 46.6 |
| CDX87407 | Canola | nucleus | 44.62 | 45.89 |
| CDX88507 | Canola | nucleus | 41.54 | 45.3 |
| KRH43767 | Soybean | nucleus | 35.08 | 45.06 |
| GSMUA_Achr7P00850_001 | Banana | plastid | 31.69 | 44.78 |
| GSMUA_Achr2P13160_001 | Banana | plastid | 32.62 | 42.91 |
| CDX79294 | Canola | nucleus | 40.0 | 42.76 |
| KRH13682 | Soybean | nucleus | 44.31 | 42.73 |
| GSMUA_Achr5P02100_001 | Banana | plastid | 31.69 | 42.21 |
| GSMUA_Achr4P32070_001 | Banana | nucleus | 36.0 | 40.91 |
| CDY21311 | Canola | cytosol | 28.0 | 38.89 |
| CDY09318 | Canola | cytosol | 28.0 | 38.89 |
| CDY07541 | Canola | cytosol | 28.0 | 38.89 |
| CDX94520 | Canola | cytosol | 28.0 | 38.89 |
| GSMUA_Achr4P23050_001 | Banana | nucleus | 22.46 | 38.83 |
| CDY34127 | Canola | extracellular | 7.08 | 38.33 |
| GSMUA_Achr4P28300_001 | Banana | nucleus | 28.0 | 37.76 |
| GSMUA_Achr6P31690_001 | Banana | nucleus | 34.15 | 37.25 |
| CDY26402 | Canola | cytosol | 33.85 | 37.16 |
| CDY51918 | Canola | cytosol | 31.69 | 35.89 |
| CDY01615 | Canola | cytosol | 33.23 | 35.41 |
| CDY71607 | Canola | cytosol | 33.23 | 35.29 |
| GSMUA_Achr9P09830_001 | Banana | nucleus | 34.46 | 34.89 |
| CDY71192 | Canola | cytosol | 27.38 | 31.79 |
| TraesCS3D01G441000.1 | Wheat | mitochondrion | 28.0 | 31.38 |
| TraesCS3D01G441300.1 | Wheat | mitochondrion | 28.0 | 31.38 |
| TraesCS7D01G431300.1 | Wheat | mitochondrion | 30.15 | 31.31 |
| Zm00001d013571_P001 | Maize | cytosol, nucleus, plastid | 31.69 | 31.21 |
| CDY18062 | Canola | cytosol | 27.08 | 31.21 |
| TraesCS3B01G484600.1 | Wheat | cytosol | 26.15 | 30.91 |
| CDY13070 | Canola | cytosol | 26.46 | 30.82 |
| HORVU7Hr1G100520.1 | Barley | cytosol, mitochondrion | 28.92 | 30.62 |
| TraesCS3A01G448500.1 | Wheat | mitochondrion | 27.38 | 30.38 |
| TraesCS4D01G018100.1 | Wheat | mitochondrion, nucleus | 28.31 | 30.36 |
| HORVU4Hr1G003180.3 | Barley | mitochondrion | 28.62 | 30.29 |
| CDY46345 | Canola | cytosol | 26.15 | 30.14 |
| TraesCS7A01G442100.1 | Wheat | mitochondrion | 28.62 | 29.62 |
| HORVU7Hr1G100540.2 | Barley | mitochondrion | 27.69 | 29.61 |
| TraesCS7B01G340600.1 | Wheat | mitochondrion | 28.0 | 29.17 |
| TraesCS7A01G442300.1 | Wheat | mitochondrion | 28.31 | 29.02 |
| EER91098 | Sorghum | nucleus | 31.69 | 29.01 |
| TraesCS7B01G340500.1 | Wheat | mitochondrion | 28.0 | 28.89 |
| TraesCS6A01G079900.1 | Wheat | cytosol, mitochondrion, plastid | 21.23 | 28.87 |
| TraesCS7B01G340700.1 | Wheat | mitochondrion | 27.69 | 28.85 |
| TraesCS4B01G019600.1 | Wheat | mitochondrion | 27.38 | 28.71 |
| TraesCS4A01G293700.1 | Wheat | mitochondrion | 27.08 | 28.57 |
| CDX69109 | Canola | nucleus | 17.85 | 28.29 |
| TraesCS7A01G441900.1 | Wheat | mitochondrion | 27.08 | 27.85 |
| TraesCS7D01G431100.1 | Wheat | mitochondrion, nucleus | 26.77 | 27.71 |
| CDY52651 | Canola | cytosol | 18.77 | 27.6 |
| TraesCS7D01G431200.1 | Wheat | mitochondrion | 25.85 | 27.27 |
| TraesCS6B01G149100.1 | Wheat | nucleus | 21.54 | 26.62 |
| TraesCS6A01G120700.1 | Wheat | nucleus | 21.54 | 26.62 |
| TraesCS6D01G073600.1 | Wheat | cytosol, nucleus, plastid | 22.15 | 26.57 |
| HORVU6Hr1G021880.1 | Barley | plastid | 21.23 | 26.44 |
| HORVU6Hr1G021960.1 | Barley | plastid | 21.23 | 26.44 |
| TraesCS6D01G110700.1 | Wheat | nucleus | 21.23 | 26.24 |
| Zm00001d033419_P001 | Maize | plastid | 22.46 | 26.07 |
| CDX72513 | Canola | cytosol | 18.46 | 25.64 |
| CDY40647 | Canola | cytosol | 18.46 | 25.53 |
| CDY15019 | Canola | cytosol | 19.69 | 25.5 |
| CDX73168 | Canola | cytosol | 19.69 | 25.5 |
| CDX76311 | Canola | cytosol | 19.69 | 25.3 |
| CDY17506 | Canola | cytosol, nucleus, plastid | 19.69 | 25.3 |
| CDY51856 | Canola | cytosol | 21.85 | 23.43 |
| CDY43447 | Canola | nucleus | 21.54 | 23.18 |
| CDY37172 | Canola | cytosol | 21.54 | 23.18 |
| CDY33511 | Canola | nucleus | 21.54 | 23.1 |
| CDY40841 | Canola | cytosol | 21.23 | 23.08 |
| CDX77733 | Canola | nucleus | 21.23 | 23.0 |
| CDX93396 | Canola | cytosol | 23.38 | 22.62 |
| CDY17048 | Canola | cytosol | 21.23 | 22.19 |
| CDY03162 | Canola | cytosol | 21.85 | 22.05 |
| CDY17103 | Canola | cytosol | 20.0 | 21.96 |
| CDY37958 | Canola | cytosol, plastid | 22.77 | 21.83 |
| CDX90458 | Canola | cytosol | 20.31 | 21.71 |
| CDY06767 | Canola | cytosol | 20.0 | 21.38 |
| CDY24542 | Canola | nucleus | 20.92 | 20.8 |
| CDY20611 | Canola | nucleus | 21.54 | 20.53 |
| CDY20963 | Canola | nucleus | 21.23 | 20.41 |
| CDY09609 | Canola | cytosol | 15.38 | 20.24 |
Protein Annotations
| KEGG:00220+6.3.2.- | KEGG:00261+6.3.2.- | KEGG:00380+6.3.2.- | Gene3D:3.30.40.10 | MapMan:35.1 | GO:A0A078HXX9 |
| UniProt:A0A078HXX9 | EnsemblPlants:CDY43390 | ProteinID:CDY43390 | ProteinID:CDY43390.1 | InterPro:E3ligase_BOI_like | EnsemblPlantsGene:GSBRNA2T00076461001 |
| InterPro:IPR001841 | InterPro:IPR013083 | PFAM:PF13920 | PIRSF:PIRSF036836 | PFscan:PS50089 | PANTHER:PTHR42647 |
| PANTHER:PTHR42647:SF7 | UniPathway:UPA00144 | UniParc:UPI000253E8CA | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | SEG:seg |
Description
BnaA01g30210DBnaA01g30210D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HXX9]
Coordinates
chrLK032554:+:172877..174302
Molecular Weight (calculated)
36456.4 Da
IEP (calculated)
6.500
GRAVY (calculated)
-0.507
Length
325 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVEAHHLNP LFSSNREMMY PVEANGLVYT NQIRYNTLPA ATMPFNPTME CQTSTFNPVY NTSPVDFLVH QSMKPTIHSV DSSVTYNSDN NNGNNVNYLP
101: PVSSLRKRPR EESVVENPMP SQKRCTDPLM FLGQDLSSNV QHHNLDIDRL ISNHVEIMRM GIEEKRKEQG RKIMEAIEQG LMKTLRAKDE EINHIGKLNL
201: FLEEKVKSLT VENQLWRDMA QSNEATVNSL RSNLQQVLAA VERNRWEEPT TADDAQSCCG SSDEGDSTMM RTVSSTMCRS CGKGEASVLL LPCRHMCLCS
301: VCGSSINTCP ICKSPKNASL HVNLS
101: PVSSLRKRPR EESVVENPMP SQKRCTDPLM FLGQDLSSNV QHHNLDIDRL ISNHVEIMRM GIEEKRKEQG RKIMEAIEQG LMKTLRAKDE EINHIGKLNL
201: FLEEKVKSLT VENQLWRDMA QSNEATVNSL RSNLQQVLAA VERNRWEEPT TADDAQSCCG SSDEGDSTMM RTVSSTMCRS CGKGEASVLL LPCRHMCLCS
301: VCGSSINTCP ICKSPKNASL HVNLS
001: MAVEAHHLNP LFSSNREMIH PVEASGVVYN TQMRYGTVPT FNPTVECQTS LFNPIYNISP VDRLVHQSMK PTIQSVDSSL TFNSDNNVDF LRPVSSRKRS
101: REESVVLNPS AYMQIQKNPT DPLMFLGQDL SSNVQQHHFD IDRLISNHVE RMRMEIEEKR KTQGRRIVEA VEQGLMKTLR AKDDEINHIG KLNLFLEEKV
201: KSLCVENQIW RDVAQSNEAT VNALRSNLQQ VLAAVERNRW EEPPTVADDA QSCCGSNDEG DSEEERWKLA GEAQDTKKMC RVGMSMCRSC GKGEASVLLL
301: PCRHMCLCSV CGSSLNTCPI CKSPKTASLH VNLSS
101: REESVVLNPS AYMQIQKNPT DPLMFLGQDL SSNVQQHHFD IDRLISNHVE RMRMEIEEKR KTQGRRIVEA VEQGLMKTLR AKDDEINHIG KLNLFLEEKV
201: KSLCVENQIW RDVAQSNEAT VNALRSNLQQ VLAAVERNRW EEPPTVADDA QSCCGSNDEG DSEEERWKLA GEAQDTKKMC RVGMSMCRSC GKGEASVLLL
301: PCRHMCLCSV CGSSLNTCPI CKSPKTASLH VNLSS
Arabidopsis Description
BRG3Probable BOI-related E3 ubiquitin-protein ligase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDD1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.