Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 6
- plastid 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G442300.1 | Wheat | mitochondrion | 92.31 | 90.85 |
| HORVU7Hr1G100520.1 | Barley | cytosol, mitochondrion | 84.29 | 85.67 |
| TraesCS7B01G340500.1 | Wheat | mitochondrion | 83.65 | 82.86 |
| TraesCS7B01G340600.1 | Wheat | mitochondrion | 81.41 | 81.41 |
| HORVU7Hr1G100540.2 | Barley | mitochondrion | 72.76 | 74.67 |
| TraesCS3B01G484600.1 | Wheat | cytosol | 65.38 | 74.18 |
| TraesCS4B01G019600.1 | Wheat | mitochondrion | 69.87 | 70.32 |
| TraesCS6B01G149100.1 | Wheat | nucleus | 43.59 | 51.71 |
| GSMUA_Achr7P00850_001 | Banana | plastid | 31.09 | 42.17 |
| Zm00001d013571_P001 | Maize | cytosol, nucleus, plastid | 43.91 | 41.52 |
| GSMUA_Achr4P23050_001 | Banana | nucleus | 24.36 | 40.43 |
| GSMUA_Achr4P28300_001 | Banana | nucleus | 31.09 | 40.25 |
| EER91098 | Sorghum | nucleus | 44.87 | 39.44 |
| GSMUA_Achr5P02100_001 | Banana | plastid | 30.77 | 39.34 |
| GSMUA_Achr2P13160_001 | Banana | plastid | 30.77 | 38.87 |
| GSMUA_Achr4P32070_001 | Banana | nucleus | 34.62 | 37.76 |
| GSMUA_Achr6P31690_001 | Banana | nucleus | 35.26 | 36.91 |
| Zm00001d033419_P001 | Maize | plastid | 30.77 | 34.29 |
| CDY07541 | Canola | cytosol | 25.0 | 33.33 |
| CDY09318 | Canola | cytosol | 25.0 | 33.33 |
| CDX94520 | Canola | cytosol | 25.0 | 33.33 |
| CDY21311 | Canola | cytosol | 25.0 | 33.33 |
| Solyc02g031710.2.1 | Tomato | nucleus | 33.01 | 33.23 |
| PGSC0003DMT400062617 | Potato | nucleus | 31.73 | 33.0 |
| GSMUA_Achr9P09830_001 | Banana | nucleus | 33.65 | 32.71 |
| VIT_10s0042g01070.t01 | Wine grape | nucleus | 31.73 | 32.67 |
| Bra035092.1-P | Field mustard | nucleus | 33.01 | 32.59 |
| CDX87407 | Canola | nucleus | 33.01 | 32.59 |
| KRH43767 | Soybean | nucleus | 25.96 | 32.02 |
| CDX88507 | Canola | nucleus | 30.45 | 31.88 |
| VIT_19s0027g00740.t01 | Wine grape | nucleus | 31.41 | 31.72 |
| KRH11729 | Soybean | nucleus | 30.77 | 30.67 |
| KRH50476 | Soybean | cytosol, nucleus, plastid | 31.41 | 30.62 |
| AT5G45100.1 | Thale cress | cytosol | 28.85 | 30.61 |
| AT4G19700.1 | Thale cress | cytosol | 29.81 | 30.59 |
| CDY26402 | Canola | cytosol | 28.85 | 30.41 |
| Bra039533.1-P | Field mustard | cytosol, nucleus, plastid | 28.85 | 30.41 |
| KRH36722 | Soybean | nucleus | 30.13 | 30.32 |
| PGSC0003DMT400026783 | Potato | cytosol, mitochondrion, nucleus, plastid, vacuole | 31.09 | 30.03 |
| CDY71192 | Canola | cytosol | 26.92 | 30.0 |
| CDY51918 | Canola | cytosol | 27.56 | 29.97 |
| KRG89416 | Soybean | nucleus | 30.13 | 29.94 |
| Bra013423.1-P | Field mustard | nucleus | 28.21 | 29.73 |
| CDY01615 | Canola | cytosol | 28.85 | 29.51 |
| Bra012532.1-P | Field mustard | nucleus | 28.53 | 29.09 |
| CDY71607 | Canola | cytosol | 28.53 | 29.09 |
| Bra027588.1-P | Field mustard | cytosol, nucleus, plastid | 25.96 | 29.03 |
| CDY13070 | Canola | cytosol | 25.96 | 29.03 |
| CDX79294 | Canola | nucleus | 28.21 | 28.95 |
| Bra028364.1-P | Field mustard | cytosol, nucleus, plastid | 25.96 | 28.72 |
| CDY18062 | Canola | cytosol | 25.96 | 28.72 |
| CDY46345 | Canola | cytosol | 25.32 | 28.01 |
| Bra034718.1-P | Field mustard | nucleus | 30.13 | 27.89 |
| KRH13682 | Soybean | nucleus | 30.13 | 27.89 |
| CDY24237 | Canola | nucleus | 28.85 | 27.78 |
| AT3G12920.1 | Thale cress | nucleus | 29.81 | 27.76 |
| CDY43390 | Canola | cytosol | 28.85 | 27.69 |
| Bra039354.1-P | Field mustard | cytosol | 28.85 | 27.69 |
| AT1G79110.1 | Thale cress | nucleus | 31.73 | 27.65 |
| Bra001477.1-P | Field mustard | nucleus | 29.81 | 27.35 |
| CDY64561 | Canola | nucleus | 29.81 | 27.35 |
| CDX82568 | Canola | nucleus | 29.49 | 27.06 |
| Solyc02g069180.2.1 | Tomato | plastid | 23.72 | 26.15 |
| TraesCS2B01G306600.1 | Wheat | cytosol | 23.72 | 22.91 |
| TraesCS2B01G306500.1 | Wheat | cytosol | 23.72 | 22.84 |
| TraesCS1B01G228800.1 | Wheat | cytosol | 23.08 | 22.09 |
| TraesCS6B01G289500.1 | Wheat | nucleus | 21.79 | 20.12 |
| CDY23552 | Canola | cytosol | 13.14 | 18.89 |
| TraesCS6B01G118100.1 | Wheat | cytosol, nucleus, plastid | 18.27 | 16.33 |
| TraesCS4B01G215100.1 | Wheat | plastid | 16.03 | 14.75 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G340700.1 | EnsemblPlantsGene:TraesCS7B01G340700 | Gene3D:3.30.40.10 | InterPro:E3ligase_BOI_like | InterPro:IPR001841 | InterPro:IPR013083 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR42647 | PANTHER:PTHR42647:SF12 | PFAM:PF13920 | PFscan:PS50089 |
| PIRSF:PIRSF036836 | SEG:seg | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr7B:+:595307353..595308366
Molecular Weight (calculated)
33641.2 Da
IEP (calculated)
7.624
GRAVY (calculated)
-0.283
Length
312 amino acids
Sequence
(BLAST)
(BLAST)
001: MASVDLQRLR HMLLTTGAGG GHHQLASAAS MPASGPCYVA AAPSQRGHQP YADLFTLPLP RPPRTSAAAE QYSEFLAMAA ADLAKKGVSH DGAQEMITKK
101: RRRDEQSSML GAADVLAAHA LQQITDVDSI LLKHARKMWT TLAEQRQSQT RLIVSAVEAR AAKRLKAKDE EIERTRTMNW ALEERLRNLF MEAQMWRDVA
201: QSNEATANVL RGDLQRALDA QAVRGGQEND AESCCWGENQ VPLCAEEEVG TPVVDERHAT GAGRCKGCRE GAAVVLLLPC RHLCVCAPCA AAAQVCPVCG
301: SAKNGSICAN FS
101: RRRDEQSSML GAADVLAAHA LQQITDVDSI LLKHARKMWT TLAEQRQSQT RLIVSAVEAR AAKRLKAKDE EIERTRTMNW ALEERLRNLF MEAQMWRDVA
201: QSNEATANVL RGDLQRALDA QAVRGGQEND AESCCWGENQ VPLCAEEEVG TPVVDERHAT GAGRCKGCRE GAAVVLLLPC RHLCVCAPCA AAAQVCPVCG
301: SAKNGSICAN FS
001: MAVDAHHLFL SPPQLFSNRE LTMNNNTMEP TSGGFCNNNQ TGYGVVSPFS VPNHTSTTTT ATPPLLHVYG GSDTIPTTAG YYADGATNLD CEFFPLPTRK
101: RSRDSSRSNY HHLLLQNPRS SSCVNAATTT TTTTLFSFLG QDIDISSHMN QQQHEIDRFV SLHMERVKYE IEEKRKRQAR TIMEAIEQGL VKRLRVKEEE
201: RERIGKVNHA LEERVKSLSI ENQIWRDLAQ TNEATANHLR TNLEHVLAQV KDVSRGAGLE KNMNEEDDAE SCCGSSCGGG GEETVRRRVG LEREAQDKAE
301: RRRRRMCRNC GEEESCVLLL PCRHLCLCGV CGSSVHTCPI CTSPKNASVH VNMSS
101: RSRDSSRSNY HHLLLQNPRS SSCVNAATTT TTTTLFSFLG QDIDISSHMN QQQHEIDRFV SLHMERVKYE IEEKRKRQAR TIMEAIEQGL VKRLRVKEEE
201: RERIGKVNHA LEERVKSLSI ENQIWRDLAQ TNEATANHLR TNLEHVLAQV KDVSRGAGLE KNMNEEDDAE SCCGSSCGGG GEETVRRRVG LEREAQDKAE
301: RRRRRMCRNC GEEESCVLLL PCRHLCLCGV CGSSVHTCPI CTSPKNASVH VNMSS
Arabidopsis Description
BRG2Probable BOI-related E3 ubiquitin-protein ligase 2 [Source:UniProtKB/Swiss-Prot;Acc:F4IDI6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.