Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- nucleus 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G290000.1 | Wheat | cytosol | 95.68 | 95.68 |
| TraesCS2D01G287900.1 | Wheat | cytosol | 94.14 | 95.31 |
| Os04t0403200-01 | Rice | nucleus | 73.46 | 68.59 |
| Zm00001d003850_P001 | Maize | extracellular | 61.73 | 59.88 |
| EES10713 | Sorghum | cytosol | 62.96 | 58.62 |
| Zm00001d025319_P001 | Maize | cytosol | 55.86 | 58.58 |
| TraesCS2B01G306600.1 | Wheat | cytosol | 57.1 | 57.28 |
| GSMUA_Achr10P... | Banana | nucleus | 35.49 | 36.16 |
| GSMUA_Achr6P16260_001 | Banana | nucleus | 34.57 | 33.23 |
| GSMUA_Achr6P08300_001 | Banana | plastid | 33.33 | 31.21 |
| TraesCS3B01G484600.1 | Wheat | cytosol | 25.31 | 29.82 |
| TraesCS4B01G019600.1 | Wheat | mitochondrion | 26.54 | 27.74 |
| TraesCS6B01G149100.1 | Wheat | nucleus | 21.91 | 27.0 |
| TraesCS7B01G340500.1 | Wheat | mitochondrion | 25.0 | 25.71 |
| Os11t0543100-01 | Rice | cytosol | 15.74 | 25.63 |
| TraesCS1B01G228800.1 | Wheat | cytosol | 25.31 | 25.15 |
| TraesCS7B01G340600.1 | Wheat | mitochondrion | 24.07 | 25.0 |
| TraesCS6B01G289500.1 | Wheat | nucleus | 25.31 | 24.26 |
| TraesCS7B01G340700.1 | Wheat | mitochondrion | 22.84 | 23.72 |
| TraesCS4B01G215100.1 | Wheat | plastid | 22.84 | 21.83 |
| TraesCS6B01G118100.1 | Wheat | cytosol, nucleus, plastid | 20.99 | 19.48 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G306500.1 | EnsemblPlantsGene:TraesCS2B01G306500 | Gene3D:3.30.40.10 | InterPro:E3ligase_BOI_like | InterPro:IPR013083 | InterPro:Znf_RING/FYVE/PHD |
| ncoils:Coil | PANTHER:PTHR42647 | PANTHER:PTHR42647:SF2 | PIRSF:PIRSF036836 | SEG:seg | MapMan:35.1 |
Description
No Description!
Coordinates
chr2B:-:437381454..437383041
Molecular Weight (calculated)
33842.1 Da
IEP (calculated)
5.863
GRAVY (calculated)
-0.145
Length
324 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVQARFLSH AFPHDLNAYR STDAAAPGNS QFLDEHAGCA PAVPCIGNNT VLSDLPRSEL TCNDNCGFAP RKRARMAGDE PAGLADLARQ RLVLQQAAAM
101: HGLMLPCDAQ SRAVGSGAAS TSGRVANAAG LNTLLYNQGV EMDALIRLET ERIRAGLEEA RRRHARAVMA TVERAAAGRL QAVEAELERA RYRNGELEER
201: LRQMTAEGQA WLGVAKSHEA VAAGLRGTLD QLLQPPCAVA GAGEGDADDA QSCCFETPAG DNADDAASKA VTAAPSCKAC GQGDACVLLL PCRHLSLCGA
301: CEPSVDTCPV CAATKNASLH VLLS
101: HGLMLPCDAQ SRAVGSGAAS TSGRVANAAG LNTLLYNQGV EMDALIRLET ERIRAGLEEA RRRHARAVMA TVERAAAGRL QAVEAELERA RYRNGELEER
201: LRQMTAEGQA WLGVAKSHEA VAAGLRGTLD QLLQPPCAVA GAGEGDADDA QSCCFETPAG DNADDAASKA VTAAPSCKAC GQGDACVLLL PCRHLSLCGA
301: CEPSVDTCPV CAATKNASLH VLLS
001: MAVDAHHLFL SPPQLFSNRE LTMNNNTMEP TSGGFCNNNQ TGYGVVSPFS VPNHTSTTTT ATPPLLHVYG GSDTIPTTAG YYADGATNLD CEFFPLPTRK
101: RSRDSSRSNY HHLLLQNPRS SSCVNAATTT TTTTLFSFLG QDIDISSHMN QQQHEIDRFV SLHMERVKYE IEEKRKRQAR TIMEAIEQGL VKRLRVKEEE
201: RERIGKVNHA LEERVKSLSI ENQIWRDLAQ TNEATANHLR TNLEHVLAQV KDVSRGAGLE KNMNEEDDAE SCCGSSCGGG GEETVRRRVG LEREAQDKAE
301: RRRRRMCRNC GEEESCVLLL PCRHLCLCGV CGSSVHTCPI CTSPKNASVH VNMSS
101: RSRDSSRSNY HHLLLQNPRS SSCVNAATTT TTTTLFSFLG QDIDISSHMN QQQHEIDRFV SLHMERVKYE IEEKRKRQAR TIMEAIEQGL VKRLRVKEEE
201: RERIGKVNHA LEERVKSLSI ENQIWRDLAQ TNEATANHLR TNLEHVLAQV KDVSRGAGLE KNMNEEDDAE SCCGSSCGGG GEETVRRRVG LEREAQDKAE
301: RRRRRMCRNC GEEESCVLLL PCRHLCLCGV CGSSVHTCPI CTSPKNASVH VNMSS
Arabidopsis Description
BRG2Probable BOI-related E3 ubiquitin-protein ligase 2 [Source:UniProtKB/Swiss-Prot;Acc:F4IDI6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.