Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 6
- plastid 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G431200.1 | Wheat | mitochondrion | 86.98 | 88.96 |
| TraesCS7A01G442100.1 | Wheat | mitochondrion | 85.08 | 85.35 |
| HORVU7Hr1G100520.1 | Barley | cytosol, mitochondrion | 82.54 | 84.69 |
| TraesCS7A01G441900.1 | Wheat | mitochondrion | 84.44 | 84.18 |
| TraesCS7B01G340700.1 | Wheat | mitochondrion | 82.86 | 83.65 |
| TraesCS7B01G340600.1 | Wheat | mitochondrion | 82.22 | 83.01 |
| HORVU7Hr1G100540.2 | Barley | mitochondrion | 73.97 | 76.64 |
| TraesCS3B01G484600.1 | Wheat | cytosol | 64.76 | 74.18 |
| TraesCS4B01G019600.1 | Wheat | mitochondrion | 68.57 | 69.68 |
| TraesCS6B01G149100.1 | Wheat | nucleus | 45.4 | 54.37 |
| GSMUA_Achr4P23050_001 | Banana | nucleus | 25.71 | 43.09 |
| Zm00001d013571_P001 | Maize | cytosol, nucleus, plastid | 44.44 | 42.42 |
| GSMUA_Achr7P00850_001 | Banana | plastid | 30.79 | 42.17 |
| GSMUA_Achr4P28300_001 | Banana | nucleus | 31.43 | 41.08 |
| EER91098 | Sorghum | nucleus | 46.03 | 40.85 |
| GSMUA_Achr2P13160_001 | Banana | plastid | 31.75 | 40.49 |
| GSMUA_Achr5P02100_001 | Banana | plastid | 29.84 | 38.52 |
| GSMUA_Achr4P32070_001 | Banana | nucleus | 34.92 | 38.46 |
| GSMUA_Achr6P31690_001 | Banana | nucleus | 34.6 | 36.58 |
| VIT_19s0027g00740.t01 | Wine grape | nucleus | 32.7 | 33.33 |
| GSMUA_Achr9P09830_001 | Banana | nucleus | 33.97 | 33.33 |
| Zm00001d033419_P001 | Maize | plastid | 29.52 | 33.21 |
| PGSC0003DMT400062617 | Potato | nucleus | 31.11 | 32.67 |
| Bra035092.1-P | Field mustard | nucleus | 32.7 | 32.59 |
| CDX87407 | Canola | nucleus | 32.7 | 32.59 |
| CDY21311 | Canola | cytosol | 24.13 | 32.48 |
| CDX94520 | Canola | cytosol | 24.13 | 32.48 |
| CDY07541 | Canola | cytosol | 24.13 | 32.48 |
| CDY09318 | Canola | cytosol | 24.13 | 32.48 |
| KRH43767 | Soybean | nucleus | 25.71 | 32.02 |
| CDX88507 | Canola | nucleus | 30.16 | 31.88 |
| Solyc02g031710.2.1 | Tomato | nucleus | 31.11 | 31.61 |
| VIT_10s0042g01070.t01 | Wine grape | nucleus | 30.16 | 31.35 |
| KRH11729 | Soybean | nucleus | 30.16 | 30.35 |
| KRH36722 | Soybean | nucleus | 29.84 | 30.32 |
| KRH50476 | Soybean | cytosol, nucleus, plastid | 30.79 | 30.31 |
| AT5G45100.1 | Thale cress | cytosol | 28.25 | 30.27 |
| KRG89416 | Soybean | nucleus | 30.16 | 30.25 |
| Bra039533.1-P | Field mustard | cytosol, nucleus, plastid | 28.25 | 30.07 |
| CDY26402 | Canola | cytosol | 28.25 | 30.07 |
| PGSC0003DMT400026783 | Potato | cytosol, mitochondrion, nucleus, plastid, vacuole | 30.79 | 30.03 |
| CDY71192 | Canola | cytosol | 26.35 | 29.64 |
| AT4G19700.1 | Thale cress | cytosol | 28.57 | 29.61 |
| CDX79294 | Canola | nucleus | 27.94 | 28.95 |
| Bra027588.1-P | Field mustard | cytosol, nucleus, plastid | 25.4 | 28.67 |
| CDY13070 | Canola | cytosol | 25.4 | 28.67 |
| CDY71607 | Canola | cytosol | 27.62 | 28.43 |
| Bra012532.1-P | Field mustard | nucleus | 27.62 | 28.43 |
| CDY01615 | Canola | cytosol | 27.3 | 28.2 |
| KRH13682 | Soybean | nucleus | 30.16 | 28.19 |
| AT3G12920.1 | Thale cress | nucleus | 29.84 | 28.06 |
| CDY18062 | Canola | cytosol | 25.08 | 28.01 |
| Bra028364.1-P | Field mustard | cytosol, nucleus, plastid | 25.08 | 28.01 |
| CDY43390 | Canola | cytosol | 28.89 | 28.0 |
| Bra039354.1-P | Field mustard | cytosol | 28.89 | 28.0 |
| AT1G79110.1 | Thale cress | nucleus | 31.75 | 27.93 |
| CDY51918 | Canola | cytosol | 25.4 | 27.87 |
| CDY24237 | Canola | nucleus | 28.57 | 27.78 |
| Bra013423.1-P | Field mustard | nucleus | 26.03 | 27.7 |
| CDY46345 | Canola | cytosol | 24.76 | 27.66 |
| Bra034718.1-P | Field mustard | nucleus | 29.52 | 27.6 |
| Bra001477.1-P | Field mustard | nucleus | 28.57 | 26.47 |
| CDY64561 | Canola | nucleus | 28.57 | 26.47 |
| CDX82568 | Canola | nucleus | 28.25 | 26.18 |
| Solyc02g069180.2.1 | Tomato | plastid | 23.17 | 25.8 |
| TraesCS2B01G306500.1 | Wheat | cytosol | 25.71 | 25.0 |
| TraesCS2B01G306600.1 | Wheat | cytosol | 25.08 | 24.46 |
| TraesCS1B01G228800.1 | Wheat | cytosol | 23.81 | 23.01 |
| TraesCS6B01G289500.1 | Wheat | nucleus | 22.54 | 21.01 |
| CDY23552 | Canola | cytosol | 13.33 | 19.35 |
| TraesCS6B01G118100.1 | Wheat | cytosol, nucleus, plastid | 18.1 | 16.33 |
| TraesCS4B01G215100.1 | Wheat | plastid | 17.46 | 16.22 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G340500.1 | EnsemblPlantsGene:TraesCS7B01G340500 | Gene3D:3.30.40.10 | InterPro:IPR001841 | InterPro:IPR013083 | InterPro:Znf_RING |
| InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR42647 | PANTHER:PTHR42647:SF12 | PFAM:PF13920 | PFscan:PS50089 | SEG:seg |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7B:+:595007450..595008494
Molecular Weight (calculated)
33798.4 Da
IEP (calculated)
6.582
GRAVY (calculated)
-0.292
Length
315 amino acids
Sequence
(BLAST)
(BLAST)
001: MASVDLQRLR HMLLTTGAGA GHHQLPYAAA MPASGPCYGA ALPSQRGHQS YADLFTLPPP PPPMTPAPYQ CSEFLAAAAD LAKKGGIPDG VQEMITKKRR
101: RDERSSMLSA ADVLADHAQQ QTMDVDRILL KHAKNMWTAL AEQRQNHTRL IVSTVEARAA KRLKAKDEEI ERIGIMNWAL EERLRNLFME AQMWLDVAQS
201: HEATANVLRG DLQRALDSQA VRGGGSGDGQ EDDAESCCWG ENQVPLCAEE EVGTPAVEER PATGAGRCKG CREGAAVVLL LPCRHLCVCA SCAAAAQACP
301: ACGSAKNGSV CVNFS
101: RDERSSMLSA ADVLADHAQQ QTMDVDRILL KHAKNMWTAL AEQRQNHTRL IVSTVEARAA KRLKAKDEEI ERIGIMNWAL EERLRNLFME AQMWLDVAQS
201: HEATANVLRG DLQRALDSQA VRGGGSGDGQ EDDAESCCWG ENQVPLCAEE EVGTPAVEER PATGAGRCKG CREGAAVVLL LPCRHLCVCA SCAAAAQACP
301: ACGSAKNGSV CVNFS
001: MAVEAHHLNP LFSSNREMIH PVEASGVVYN TQMRYGTVPT FNPTVECQTS LFNPIYNISP VDRLVHQSMK PTIQSVDSSL TFNSDNNVDF LRPVSSRKRS
101: REESVVLNPS AYMQIQKNPT DPLMFLGQDL SSNVQQHHFD IDRLISNHVE RMRMEIEEKR KTQGRRIVEA VEQGLMKTLR AKDDEINHIG KLNLFLEEKV
201: KSLCVENQIW RDVAQSNEAT VNALRSNLQQ VLAAVERNRW EEPPTVADDA QSCCGSNDEG DSEEERWKLA GEAQDTKKMC RVGMSMCRSC GKGEASVLLL
301: PCRHMCLCSV CGSSLNTCPI CKSPKTASLH VNLSS
101: REESVVLNPS AYMQIQKNPT DPLMFLGQDL SSNVQQHHFD IDRLISNHVE RMRMEIEEKR KTQGRRIVEA VEQGLMKTLR AKDDEINHIG KLNLFLEEKV
201: KSLCVENQIW RDVAQSNEAT VNALRSNLQQ VLAAVERNRW EEPPTVADDA QSCCGSNDEG DSEEERWKLA GEAQDTKKMC RVGMSMCRSC GKGEASVLLL
301: PCRHMCLCSV CGSSLNTCPI CKSPKTASLH VNLSS
Arabidopsis Description
BRG3Probable BOI-related E3 ubiquitin-protein ligase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDD1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.