Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G338800.1 | Wheat | cytosol, golgi, plastid, unclear | 93.85 | 96.06 |
| HORVU1Hr1G075560.1 | Barley | cytosol | 88.46 | 94.26 |
| Zm00001d038652_P003 | Maize | cytosol | 73.08 | 74.22 |
| OQU78269 | Sorghum | cytosol | 67.69 | 69.84 |
| Bra036335.1-P | Field mustard | cytosol | 53.85 | 59.83 |
| GSMUA_Achr4P22400_001 | Banana | cytosol, unclear | 52.31 | 59.65 |
| AT5G42980.1 | Thale cress | cytosol | 53.85 | 59.32 |
| CDY53958 | Canola | cytosol | 52.31 | 58.12 |
| VIT_18s0001g13250.t01 | Wine grape | cytosol | 50.77 | 57.89 |
| AT1G45145.1 | Thale cress | cytosol | 52.31 | 57.63 |
| CDY36029 | Canola | cytosol | 52.31 | 57.63 |
| Bra014037.1-P | Field mustard | cytosol | 51.54 | 56.78 |
| AT1G19730.1 | Thale cress | cytosol | 51.54 | 56.3 |
| CDY29406 | Canola | cytosol | 51.54 | 56.3 |
| Bra025762.1-P | Field mustard | cytosol | 51.54 | 56.3 |
| CDY39355 | Canola | cytosol | 51.54 | 56.3 |
| KRH76717 | Soybean | endoplasmic reticulum, nucleus | 50.77 | 55.0 |
| KRH51778 | Soybean | endoplasmic reticulum | 49.23 | 54.7 |
| Solyc04g080850.2.1 | Tomato | extracellular | 51.54 | 54.47 |
| KRH61100 | Soybean | cytosol | 48.46 | 53.85 |
| TraesCS2A01G243200.1 | Wheat | cytosol, golgi, plastid | 48.46 | 53.39 |
| PGSC0003DMT400009623 | Potato | cytosol | 50.0 | 52.85 |
| CDY32970 | Canola | cytosol | 50.0 | 52.85 |
| CDY43592 | Canola | cytosol | 50.0 | 52.85 |
| Bra027469.1-P | Field mustard | cytosol | 50.0 | 52.85 |
| KRH05879 | Soybean | endoplasmic reticulum | 50.0 | 52.85 |
| KRH28739 | Soybean | cytosol | 48.46 | 52.5 |
| VIT_04s0023g02700.t01 | Wine grape | cytosol | 46.15 | 52.17 |
| KRH15131 | Soybean | cytosol, nucleus | 47.69 | 52.1 |
| GSMUA_Achr2P17610_001 | Banana | cytosol | 44.62 | 50.88 |
| Solyc02g084710.2.1 | Tomato | extracellular | 45.38 | 50.0 |
| PGSC0003DMT400009306 | Potato | cytosol | 45.38 | 50.0 |
| TraesCS7A01G562100.1 | Wheat | cytosol | 39.23 | 48.11 |
| TraesCS5A01G448200.1 | Wheat | cytosol | 41.54 | 41.22 |
| VIT_18s0001g13240.t01 | Wine grape | cytosol | 48.46 | 39.87 |
| TraesCS1A01G112400.1 | Wheat | cytosol | 37.69 | 37.4 |
| TraesCS1A01G301500.1 | Wheat | cytosol | 33.85 | 30.77 |
| TraesCS2A01G480300.1 | Wheat | cytosol | 27.69 | 25.9 |
| TraesCS3A01G418400.1 | Wheat | plastid | 34.62 | 23.81 |
Protein Annotations
| MapMan:10.6.1 | MapMan:18.7.2 | Gene3D:3.40.30.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006662 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 | GO:GO:0045454 |
| InterPro:IPR013766 | PFAM:PF00085 | PIRSF:PIRSF000077 | PRINTS:PR00421 | ScanProsite:PS00194 | PFscan:PS51352 |
| PANTHER:PTHR10438 | PANTHER:PTHR10438:SF293 | SUPFAM:SSF52833 | InterPro:Thioredoxin | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_CS |
| InterPro:Thioredoxin_domain | EnsemblPlantsGene:TraesCS1A01G325600 | EnsemblPlants:TraesCS1A01G325600.1 | TIGR:cd02947 | SEG:seg | : |
Description
No Description!
Coordinates
chr1A:+:516430504..516431957
Molecular Weight (calculated)
13750.7 Da
IEP (calculated)
4.879
GRAVY (calculated)
0.377
Length
130 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAATATTT AAATAAAVGP GEVISVHSLE QWTMQIEEAN AAKKLVVIDF TASWCGPCRI MAPIFADLAK KFPAAVFLKV DVDELKPIAE QFSVEAMPTF
101: LFMKEGDVKD RVVGAIKEEL TTKVGLHAAA
101: LFMKEGDVKD RVVGAIKEEL TTKVGLHAAA
001: MAGEGEVIAC HTLEVWNEKV KDANESKKLI VIDFTASWCP PCRFIAPVFA EMAKKFTNVV FFKIDVDELQ AVAQEFKVEA MPTFVFMKEG NIIDRVVGAA
101: KDEINEKLMK HGGLVASA
101: KDEINEKLMK HGGLVASA
Arabidopsis Description
TRX5Thioredoxin H5 [Source:UniProtKB/Swiss-Prot;Acc:Q39241]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.