Factsheet for TraesCS2B01G323200.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 4
endoplasmic reticulum 7
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	endoplasmic reticulum

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G325600.1
TraesCS1B01G338800.1
TraesCS1B01G339000.1
TraesCS1D01G327500.1
TraesCS2A01G512100.1
TraesCS2A01G545700.1
TraesCS2A01G546300.1
TraesCS2A01G546700.1
TraesCS2B01G540100.2
TraesCS2B01G576300.1
TraesCS2B01G577300.1
TraesCS2B01G577500.1
TraesCS2D01G513600.1
TraesCS2D01G546600.1
TraesCS2D01G547600.1
TraesCS2D01G547800.1
TraesCS5D01G149800.1
TraesCS7A01G264200.1
TraesCS7A01G562100.1
TraesCS7B01G162200.1
TraesCS7D01G001000.1
TraesCS7D01G265100.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G21750.1	TraesCS2A01G512100.1	AT1G47128.1	18676877
AT1G21750.1	TraesCS2B01G540100.2	AT1G47128.1	18676877
AT1G21750.1	TraesCS2D01G513600.1	AT1G47128.1	18676877
AT1G21750.1	TraesCS2A01G545700.1	AT3G19390.1	18676877
AT1G21750.1	TraesCS2A01G546300.1	AT3G19390.1	18676877
AT1G21750.1	TraesCS2A01G546700.1	AT3G19390.1	18676877
AT1G21750.1	TraesCS2B01G576300.1	AT3G19390.1	18676877
AT1G21750.1	TraesCS2B01G577300.1	AT3G19390.1	18676877
AT1G21750.1	TraesCS2B01G577500.1	AT3G19390.1	18676877
AT1G21750.1	TraesCS2D01G546600.1	AT3G19390.1	18676877
AT1G21750.1	TraesCS2D01G547600.1	AT3G19390.1	18676877
AT1G21750.1	TraesCS2D01G547800.1	AT3G19390.1	18676877
AT1G21750.1	TraesCS5D01G149800.1	AT3G19390.1	18676877
AT1G21750.1	TraesCS7A01G264200.1	AT3G19390.1	18676877
AT1G21750.1	TraesCS7B01G162200.1	AT3G19390.1	18676877
AT1G21750.1	TraesCS7D01G265100.1	AT3G19390.1	18676877
AT1G21750.1	TraesCS2A01G545700.1	AT3G19400.1	18676877
AT1G21750.1	TraesCS2A01G546300.1	AT3G19400.1	18676877
AT1G21750.1	TraesCS2A01G546700.1	AT3G19400.1	18676877
AT1G21750.1	TraesCS2B01G576300.1	AT3G19400.1	18676877
AT1G21750.1	TraesCS2B01G577300.1	AT3G19400.1	18676877
AT1G21750.1	TraesCS2B01G577500.1	AT3G19400.1	18676877
AT1G21750.1	TraesCS2D01G546600.1	AT3G19400.1	18676877
AT1G21750.1	TraesCS2D01G547600.1	AT3G19400.1	18676877
AT1G21750.1	TraesCS2D01G547800.1	AT3G19400.1	18676877
AT1G21750.1	TraesCS5D01G149800.1	AT3G19400.1	18676877
AT1G21750.1	TraesCS7A01G264200.1	AT3G19400.1	18676877
AT1G21750.1	TraesCS7B01G162200.1	AT3G19400.1	18676877
AT1G21750.1	TraesCS7D01G265100.1	AT3G19400.1	18676877
AT1G21750.1	TraesCS1A01G325600.1	AT5G42980.1	15352244
AT1G21750.1	TraesCS1B01G338800.1	AT5G42980.1	15352244
AT1G21750.1	TraesCS1B01G339000.1	AT5G42980.1	15352244
AT1G21750.1	TraesCS1D01G327500.1	AT5G42980.1	15352244
AT1G21750.1	TraesCS7A01G562100.1	AT5G42980.1	15352244
AT1G21750.1	TraesCS7D01G001000.1	AT5G42980.1	15352244
AT1G21750.1	TraesCS2A01G512100.1	AT5G43060.1	18676877
AT1G21750.1	TraesCS2B01G540100.2	AT5G43060.1	18676877
AT1G21750.1	TraesCS2D01G513600.1	AT5G43060.1	18676877

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G305000.1	Wheat	endoplasmic reticulum	97.1	97.29
TraesCS2A01G306500.1	Wheat	endoplasmic reticulum	96.72	96.91
KXG26345	Sorghum	endoplasmic reticulum	76.83	76.83
Os04t0436300-01	Rice	endoplasmic reticulum	41.12	72.7
Solyc06g060290.2.1	Tomato	plastid	46.33	54.79
TraesCS4B01G101800.3	Wheat	golgi	54.05	54.69
PGSC0003DMT400045299	Potato	endoplasmic reticulum	51.74	53.92
Bra016405.1-P	Field mustard	endoplasmic reticulum	51.16	52.89
Bra012293.1-P	Field mustard	endoplasmic reticulum	50.58	52.82
AT1G21750.1	Thale cress	endoplasmic reticulum	50.58	52.3
PGSC0003DMT400010624	Potato	endoplasmic reticulum	49.03	51.42
Bra017948.1-P	Field mustard	endoplasmic reticulum	49.23	51.2
PGSC0003DMT400060279	Potato	cytosol	17.76	50.55
HORVU2Hr1G076360.1	Barley	endoplasmic reticulum	50.0	49.81
AT1G77510.1	Thale cress	endoplasmic reticulum	48.84	49.8
Bra015665.1-P	Field mustard	endoplasmic reticulum	48.84	49.71
VIT_07s0031g02660.t01	Wine grape	endoplasmic reticulum	47.1	48.8
KRH64647	Soybean	cytosol, mitochondrion	19.69	48.11
Bra008311.1-P	Field mustard	endoplasmic reticulum	47.1	47.75
PGSC0003DMT400036388	Potato	endoplasmic reticulum	44.98	47.65
Solyc06g005940.2.1	Tomato	nucleus, plastid	44.98	46.69
Solyc05g056400.2.1	Tomato	plastid	47.3	46.31
CDX79207	Canola	cytosol	10.62	45.45
Solyc05g018700.2.1	Tomato	plastid	42.47	44.35
TraesCS1B01G126100.1	Wheat	endoplasmic reticulum	18.92	26.7
TraesCS3B01G532200.1	Wheat	endoplasmic reticulum	28.19	24.83
TraesCS6B01G005500.1	Wheat	endoplasmic reticulum	28.19	24.58
TraesCS6B01G005700.1	Wheat	endoplasmic reticulum	12.36	22.78
TraesCS7B01G022800.1	Wheat	endoplasmic reticulum	24.32	22.7
TraesCS4B01G196700.2	Wheat	endoplasmic reticulum	6.76	22.44
TraesCS6B01G261500.2	Wheat	endoplasmic reticulum	17.95	22.25
TraesCS2B01G321000.1	Wheat	golgi	17.57	21.82
TraesCS5B01G232900.1	Wheat	golgi	18.15	21.36
TraesCS6B01G005600.1	Wheat	plastid	12.93	20.74
TraesCS6B01G005100.1	Wheat	endoplasmic reticulum	16.02	20.65

Protein Annotations

Gene3D:3.40.30.10	MapMan:50.5.3	InterPro:Disulphide_isomerase	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0008150	GO:GO:0009987
GO:GO:0016853	GO:GO:0019725	GO:GO:0045454	InterPro:IPR013766	PFAM:PF00085	PFAM:PF13848
PRINTS:PR00421	ScanProsite:PS00194	PFscan:PS51352	PANTHER:PTHR18929	PANTHER:PTHR18929:SF186	InterPro:Prot_disulphide_isomerase
SUPFAM:SSF52833	SignalP:SignalP-noTM	TIGRFAMs:TIGR01126	TIGRFAMs:TIGR01130	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS
InterPro:Thioredoxin_domain	EnsemblPlantsGene:TraesCS2B01G323200	EnsemblPlants:TraesCS2B01G323200.1	TIGR:cd02961	TIGR:cd02981	TIGR:cd02982
TIGR:cd02995	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2B:-:461978763..461981381

Molecular Weight (calculated)

57128.0 Da

IEP (calculated)

4.403

GRAVY (calculated)

-0.083

Length

518 amino acids

Sequence
(BLAST)

001: MDVPLALPFA TLVVVLLLCS GPIAAEVDAT AVLGEAVLTL DAGNFSEVVA KHEFIVVEFY APWCGHCKEL APEYEKAASM LRKRDPPVVL AKVDAYDESN
101: KELKDKYKVH GYPAIKIIRK GGSDLSAYGG PRDAEGIVEY LTRQVGPASL EIRSAVDASR SIGDKGGVVL VGVFPEFAGI EYENFMAVAN KMRTDYDFFH
201: TSDASILPRG DLTVKGPLLR LFKPFDELFV DSQDFDDDAI KKFIEVSGFP TVVTFDADPT NHKFIERYYS TPSAKAMLFL RFSDDRVETF KSQMHEAARQ
301: LSGNNISFLI GDVSTADRAF EYFGLKESDV PLLLVLASTG KYLNPTMEPD QLIPWMKQYI YGNLTPYVKS EPIPKVNDQP VKVVVADNID EIVFNSGKNV
401: LLEFYAPWCG HCRKLAPILE EVAISLQDDE DVVIAKMDGT ANDVPTDFAV EGYPALYFYS SSGGDLLMYD GPRTADEIIS FIKKNRGAKA AAVEVTQMDA
501: VEEEVTSPTP SESVKDEL

Best Arabidopsis Sequence Match ( AT1G21750.1 )
(BLAST)

001: MAMRGFTLFS ILVLSLCASS IRSEETETKE FVLTLDHTNF TDTINKHDFI VVEFYAPWCG HCKQLAPEYE KAASALSSNV PPVVLAKIDA SEETNREFAT
101: QYEVQGFPTI KIFRNGGKAV QEYNGPREAE GIVTYLKKQS GPASAEIKSA DDASEVVSDK KVVVVGIFPK LSGSEFDSFM AIAEKLRSEL DFAHTSDAKL
201: LPRGESSVTG PVVRLFKPFD EQFVDSKDFD GEALEKFVKE SSIPLITVFD KDPNNHPYVI KFFESTNTKA MLFINFTGEG AESLKSKYRE VATSNKGQGL
301: SFLLGDAENS QGAFQYFGLE ESQVPLIIIQ TADDKKYLKT NVEVDQIESW VKDFKDGKIA PHKKSQPIPA ENNEPVKVVV SDSLDDIVLN SGKNVLLEFY
401: APWCGHCQKL APILDEVAVS YQSDSSVVIA KLDATANDFP KDTFDVKGFP TIYFKSASGN VVVYEGDRTK EDFISFVDKN KDTVGEPKKE EETTEEVKDE
501: L

Arabidopsis Description

PDIL1-1Protein disulfide isomerase-like 1-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI01]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.