Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH64647 | Soybean | cytosol, mitochondrion | 37.19 | 21.23 |
| CDY40898 | Canola | endoplasmic reticulum | 64.46 | 15.29 |
| CDY38344 | Canola | endoplasmic reticulum | 63.64 | 15.07 |
| CDX88376 | Canola | cytosol, endoplasmic reticulum | 60.33 | 14.29 |
| CDX87514 | Canola | endoplasmic reticulum | 58.68 | 13.95 |
| CDY08176 | Canola | endoplasmic reticulum | 56.2 | 13.65 |
| CDY04673 | Canola | endoplasmic reticulum | 56.2 | 13.65 |
| CDX96575 | Canola | endoplasmic reticulum | 56.2 | 13.57 |
| CDY00400 | Canola | endoplasmic reticulum | 56.2 | 13.49 |
| CDY38821 | Canola | cytosol, endoplasmic reticulum | 55.37 | 13.4 |
| CDY01314 | Canola | endoplasmic reticulum | 54.55 | 13.31 |
| VIT_07s0031g02660.t01 | Wine grape | endoplasmic reticulum | 50.41 | 12.2 |
| CDX95413 | Canola | cytosol | 23.14 | 11.72 |
| KXG26345 | Sorghum | endoplasmic reticulum | 47.11 | 11.0 |
| TraesCS2A01G306500.1 | Wheat | endoplasmic reticulum | 46.28 | 10.83 |
| TraesCS2D01G305000.1 | Wheat | endoplasmic reticulum | 46.28 | 10.83 |
| TraesCS2B01G323200.1 | Wheat | endoplasmic reticulum | 45.45 | 10.62 |
| CDX95726 | Canola | endoplasmic reticulum | 26.45 | 8.84 |
| CDX80106 | Canola | endoplasmic reticulum | 25.62 | 8.59 |
| CDY57723 | Canola | endoplasmic reticulum | 25.62 | 8.59 |
| CDX83326 | Canola | endoplasmic reticulum | 25.62 | 8.56 |
| CDY53400 | Canola | endoplasmic reticulum | 22.31 | 7.99 |
| CDY18278 | Canola | endoplasmic reticulum | 23.14 | 6.42 |
| CDY31525 | Canola | endoplasmic reticulum | 31.41 | 6.38 |
| CDY53631 | Canola | endoplasmic reticulum | 31.41 | 6.38 |
| CDY12149 | Canola | endoplasmic reticulum | 23.14 | 6.32 |
| CDX79497 | Canola | endoplasmic reticulum | 23.14 | 6.32 |
| CDY52544 | Canola | endoplasmic reticulum | 23.14 | 6.31 |
| CDY09193 | Canola | endoplasmic reticulum | 30.58 | 6.3 |
| CDX73422 | Canola | endoplasmic reticulum | 28.93 | 6.08 |
| CDY56958 | Canola | endoplasmic reticulum | 28.93 | 6.04 |
| CDY47529 | Canola | endoplasmic reticulum | 21.49 | 4.94 |
| CDY68572 | Canola | endoplasmic reticulum | 20.66 | 4.77 |
| CDY02550 | Canola | endoplasmic reticulum | 20.66 | 4.75 |
| CDY52981 | Canola | endoplasmic reticulum | 20.66 | 4.73 |
| CDY37102 | Canola | endoplasmic reticulum | 8.26 | 2.3 |
| CDX73337 | Canola | endoplasmic reticulum | 8.26 | 2.3 |
| Os04t0436300-01 | Rice | endoplasmic reticulum | 4.96 | 2.05 |
| CDX95112 | Canola | endoplasmic reticulum | 1.65 | 1.39 |
| CDX93606 | Canola | endoplasmic reticulum | 1.65 | 1.39 |
| HORVU2Hr1G076360.1 | Barley | endoplasmic reticulum | 2.48 | 0.58 |
Protein Annotations
| EnsemblPlants:CDX79207 | EnsemblPlantsGene:GSBRNA2T00131798001 | Gene3D:3.40.30.10 | GO:A0A078CR53 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0019725 | GO:GO:0045454 | InterPro:IPR013766 | InterPro:Thioredoxin-like_sf |
| InterPro:Thioredoxin_domain | PANTHER:PTHR18929 | PANTHER:PTHR18929:SF186 | PFAM:PF00085 | PFscan:PS51352 | ProteinID:CDX79207 |
| ProteinID:CDX79207.1 | SUPFAM:SSF52833 | UniParc:UPI0004EAD6D9 | MapMan:35.1 | : | : |
Description
BnaC06g20960D
Coordinates
chrLK031817:+:296743..297407
Molecular Weight (calculated)
13724.5 Da
IEP (calculated)
6.254
GRAVY (calculated)
-0.398
Length
121 amino acids
Sequence
(BLAST)
(BLAST)
001: MDERLQGFIL PIPAENNKPV KVVVAESLDD IVYKSGKNVL IEFYAPSCGH CQVSPILDEV ALKLQNDPSV IIAKLDATEN DIPSEPFDGK GFPPDHLLEI
101: SEWKRCRVRR RQDKGRLYKL H
101: SEWKRCRVRR RQDKGRLYKL H
001: MAFKGFACFS ILLLLSLFVS SIRSEETKEF VLTLDHSNFT ETISKHDFIV VEFYAPWCGH CQKLAPEYEK AASELSSHNP PLALAKIDAS EEANKEFANE
101: YKIQGFPTLK ILRNGGKSVQ DYNGPREAEG IVTYLKKQSG PASVEIKSAD SATEVVGEKN VVAVGVFPKL SGDEFDSFMA LAEKLRADYD FAHTLDAKFL
201: PRGESVEGPA VRLFKPFDEL FVDSKDFNGE ALEKFVKESS IPLVTVFDSD PNNHPYVAKF FESPATKAMM FVNFTGATAE ALKSKYREVA TSNKDQSLAF
301: LVGDAESSQG AFQYFGLEES QVPLIIIQTP DNKKYLKVNV EVDQIESWFK DFQDGKVAVH KKSQPIPAEN NEPVKVVVAE SLDDIVFKSG KNVLIEFYAP
401: WCGHCQKLAP ILDEVALSFQ NDPSVIIAKL DATANDIPSD TFDVKGFPTI YFRSASGNVV VYEGDRTKED FINFVEKNSE KKPTSHGEES TKSEEPKKTE
501: ETAAKDEL
101: YKIQGFPTLK ILRNGGKSVQ DYNGPREAEG IVTYLKKQSG PASVEIKSAD SATEVVGEKN VVAVGVFPKL SGDEFDSFMA LAEKLRADYD FAHTLDAKFL
201: PRGESVEGPA VRLFKPFDEL FVDSKDFNGE ALEKFVKESS IPLVTVFDSD PNNHPYVAKF FESPATKAMM FVNFTGATAE ALKSKYREVA TSNKDQSLAF
301: LVGDAESSQG AFQYFGLEES QVPLIIIQTP DNKKYLKVNV EVDQIESWFK DFQDGKVAVH KKSQPIPAEN NEPVKVVVAE SLDDIVFKSG KNVLIEFYAP
401: WCGHCQKLAP ILDEVALSFQ NDPSVIIAKL DATANDIPSD TFDVKGFPTI YFRSASGNVV VYEGDRTKED FINFVEKNSE KKPTSHGEES TKSEEPKKTE
501: ETAAKDEL
Arabidopsis Description
PDIL1-2Protein disulfide isomerase-like 1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRG3]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.