Factsheet for VIT_07s0031g02660.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
endoplasmic reticulum 10
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	endoplasmic reticulum
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0001g02510.t01	Wine grape	endoplasmic reticulum	60.6	60.72
CDX79207	Canola	cytosol	12.2	50.41
KXG26345	Sorghum	endoplasmic reticulum	50.8	49.03
Os04t0436300-01	Rice	endoplasmic reticulum	28.4	48.46
TraesCS2A01G306500.1	Wheat	endoplasmic reticulum	49.2	47.58
TraesCS2D01G305000.1	Wheat	endoplasmic reticulum	48.8	47.2
TraesCS2B01G323200.1	Wheat	endoplasmic reticulum	48.8	47.1
Os02t0554900-01	Rice	plastid	50.6	46.42
KRH64647	Soybean	cytosol, mitochondrion	18.8	44.34
VIT_13s0019g04240.t01	Wine grape	endoplasmic reticulum	30.6	27.27
HORVU2Hr1G076360.1	Barley	endoplasmic reticulum	27.4	26.35
VIT_06s0004g02890.t01	Wine grape	endoplasmic reticulum	30.4	26.34
VIT_18s0075g00210.t01	Wine grape	endoplasmic reticulum	19.0	23.99
VIT_06s0004g03250.t01	Wine grape	endoplasmic reticulum	6.6	22.3
VIT_09s0002g04250.t01	Wine grape	endoplasmic reticulum	22.6	21.04
VIT_12s0059g01560.t01	Wine grape	endoplasmic reticulum	18.0	20.79

Protein Annotations

EntrezGene:100266446	wikigene:100266446	Gene3D:3.40.30.10	MapMan:50.5.3	ProteinID:CBI21618	ProteinID:CBI21618.3
UniProt:D7SWG9	EMBL:FN595233	GO:GO:0003674	GO:GO:0003756	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0006457	GO:GO:0006950
GO:GO:0008150	GO:GO:0009987	GO:GO:0016853	GO:GO:0019725	GO:GO:0034976	GO:GO:0045454
InterPro:IPR013766	EntrezGene:LOC100266446	wikigene:LOC100266446	PFAM:PF00085	PFAM:PF13848	PRINTS:PR00421
ScanProsite:PS00194	PFscan:PS51352	PANTHER:PTHR18929	PANTHER:PTHR18929:SF186	InterPro:Prot_disulphide_isomerase	SUPFAM:SSF52833
SignalP:SignalP-noTM	TIGRFAMs:TIGR01130	TMHMM:TMhelix	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain
UniParc:UPI00015CA185	ArrayExpress:VIT_07s0031g02660	EnsemblPlantsGene:VIT_07s0031g02660	EnsemblPlants:VIT_07s0031g02660.t01	RefSeq:XP_002273664	RefSeq:XP_002273664.1
RefSeq:XP_010652943.2	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr7:+:19044008..19052039

Molecular Weight (calculated)

55837.3 Da

IEP (calculated)

4.301

GRAVY (calculated)

-0.141

Length

500 amino acids

Sequence
(BLAST)

001: MRMVFPMECK CLFSVLVLFS SLLALCTVPI SAVEGEFVVT LDYSNFTETV AKQDFIVVEF YAPWCGHCQQ LAPEYEKAAS VLSSHDPPII LAKVNGDDAA
101: NRQLGQKFDI KGFPTLFIVK DGGKKVQEYN GPPDADGIVN YLKRQLGPAS TEIKSSEDAA TFIDEKGVAI VGVFPDFSGE EFDNFISIAE NLRSDYVFGH
201: TLDAKLLPRG ESSVKGPIVR LFKPFDELYV DFQDFEVDAL EKFVKEASMP LVTIFDSDPS GHGYVAKFFD LPNDKVMLVV EFNSEEFDAF NSKYRDAAEL
301: YKGKNLGFLL GDVNVSEGAV EYYGLKADQT PLIIIDNNDL DTRYFEAKIK PDQIAPWLEE YLDGRLKPFI KSQPIPETND GPVKVAVFET LEEIVFNSGK
401: NVLIEFYAPW CGHCQRLAPI LEEAAVSFQN DPDIIIAKLD ATVNDIPKKF KVEGFPTMYF KPANGELVEY GGDATKEAII DFIKEKRDKS IQEGSARDEL

Best Arabidopsis Sequence Match ( AT1G77510.1 )
(BLAST)

001: MAFKGFACFS ILLLLSLFVS SIRSEETKEF VLTLDHSNFT ETISKHDFIV VEFYAPWCGH CQKLAPEYEK AASELSSHNP PLALAKIDAS EEANKEFANE
101: YKIQGFPTLK ILRNGGKSVQ DYNGPREAEG IVTYLKKQSG PASVEIKSAD SATEVVGEKN VVAVGVFPKL SGDEFDSFMA LAEKLRADYD FAHTLDAKFL
201: PRGESVEGPA VRLFKPFDEL FVDSKDFNGE ALEKFVKESS IPLVTVFDSD PNNHPYVAKF FESPATKAMM FVNFTGATAE ALKSKYREVA TSNKDQSLAF
301: LVGDAESSQG AFQYFGLEES QVPLIIIQTP DNKKYLKVNV EVDQIESWFK DFQDGKVAVH KKSQPIPAEN NEPVKVVVAE SLDDIVFKSG KNVLIEFYAP
401: WCGHCQKLAP ILDEVALSFQ NDPSVIIAKL DATANDIPSD TFDVKGFPTI YFRSASGNVV VYEGDRTKED FINFVEKNSE KKPTSHGEES TKSEEPKKTE
501: ETAAKDEL

Arabidopsis Description

PDIL1-2Protein disulfide isomerase-like 1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRG3]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.