Factsheet for VIT_12s0059g01560.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
endoplasmic reticulum 8
vacuole 5
plasma membrane 5
golgi 5
plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	endoplasmic reticulum
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH73319	Soybean	endoplasmic reticulum	83.37	82.42
KRH14820	Soybean	endoplasmic reticulum	83.37	82.42
GSMUA_Achr7P12170_001	Banana	endoplasmic reticulum	80.37	80.74
Solyc07g049450.2.1	Tomato	nucleus	80.37	80.56
PGSC0003DMT400001769	Potato	extracellular	80.14	80.32
EER96832	Sorghum	endoplasmic reticulum	78.06	76.99
Zm00001d020687_P002	Maize	endoplasmic reticulum	77.83	76.42
Os09t0451500-02	Rice	plasma membrane	77.37	75.96
TraesCS5B01G232900.1	Wheat	golgi	77.14	75.91
Zm00001d005866_P003	Maize	endoplasmic reticulum	77.14	75.74
TraesCS5A01G234400.1	Wheat	golgi	76.67	75.45
TraesCS5D01G241200.1	Wheat	golgi	75.98	74.77
Bra015375.1-P	Field mustard	endoplasmic reticulum	74.36	74.54
CDY53400	Canola	endoplasmic reticulum	57.74	73.96
CDY18278	Canola	endoplasmic reticulum	74.13	73.62
CDY12149	Canola	endoplasmic reticulum	74.83	73.14
Bra005546.1-P	Field mustard	endoplasmic reticulum	74.83	73.14
CDY52544	Canola	endoplasmic reticulum	74.83	72.97
CDX79497	Canola	endoplasmic reticulum	74.36	72.69
AT1G04980.1	Thale cress	endoplasmic reticulum	73.67	71.36
AT2G32920.1	Thale cress	endoplasmic reticulum	71.82	70.68
HORVU5Hr1G067570.1	Barley	plasma membrane	77.6	64.86
VIT_06s0004g03250.t01	Wine grape	endoplasmic reticulum	7.85	22.97
VIT_18s0001g02510.t01	Wine grape	endoplasmic reticulum	21.71	18.84
VIT_07s0031g02660.t01	Wine grape	endoplasmic reticulum	20.79	18.0
VIT_13s0019g04240.t01	Wine grape	endoplasmic reticulum	20.79	16.04
VIT_06s0004g02890.t01	Wine grape	endoplasmic reticulum	20.09	15.08
VIT_18s0075g00210.t01	Wine grape	endoplasmic reticulum	12.47	13.64
VIT_09s0002g04250.t01	Wine grape	endoplasmic reticulum	15.24	12.29

Protein Annotations

EntrezGene:100243120	wikigene:100243120	MapMan:18.11.1.2	Gene3D:3.40.30.10	ProteinID:CBI28881	ProteinID:CBI28881.3
UniProt:D7TEF8	InterPro:Disulphide_isomerase	EMBL:FN595765	GO:GO:0003674	GO:GO:0003756	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005788
GO:GO:0006457	GO:GO:0006950	GO:GO:0008150	GO:GO:0009987	GO:GO:0016853	GO:GO:0019725
GO:GO:0034976	GO:GO:0045454	InterPro:IPR013766	EntrezGene:LOC100243120	wikigene:LOC100243120	PFAM:PF00085
PRINTS:PR00421	ScanProsite:PS00194	PFscan:PS51352	PANTHER:PTHR18929	PANTHER:PTHR18929:SF38	SUPFAM:SSF52833
SignalP:SignalP-noTM	TIGR:TC66313	TIGRFAMs:TIGR01126	TMHMM:TMhelix	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS
InterPro:Thioredoxin_domain	UniParc:UPI0001984717	ArrayExpress:VIT_12s0059g01560	EnsemblPlantsGene:VIT_12s0059g01560	EnsemblPlants:VIT_12s0059g01560.t01	unigene:Vvi.985
RefSeq:XP_002276520	RefSeq:XP_002276520.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr12:+:6471580..6476405

Molecular Weight (calculated)

46609.9 Da

IEP (calculated)

5.103

GRAVY (calculated)

-0.039

Length

433 amino acids

Sequence
(BLAST)

001: MARSPPLITL PFLTIFIVVQ LSATAYGLYG PSSPVVQLNP SNFKSKVLNS NGVVLVEFFA PWCGHCKALT PTWEKAASVL KGVATVAALD ADANQALAQE
101: YGIRGFPTIK VFAPGKPPVD YQGARDVKPI AEFALQQIKA LLKERLSGKA TGGSSEKSEI SSSVELTSSN FDELVLKSKD LWIVEFFAPW CGHCKKLAPE
201: WKKAANNLKG KVKLGHVDCD SDKSLMSRFS VQGFPTILVF GADKDTPVPY EGARTASAIE SFALEQLETN VAPPEVTELT GPDVMEEKCG SAAICFVAFL
301: PDILDSKAEG RNKYLEMMLS IAEKFKRSPY SYVWAAAGKQ ADLEKQVGVG GYGYPALVAL NVKKGAYAPL KSAFELDQII GFVKEAGHGG KGILPLASTP
401: VVVKTEPWDG KDGEIIEEDE FSLEELMGDD ATS

Best Arabidopsis Sequence Match ( AT1G04980.1 )
(BLAST)

001: MERKMYKSTV FPICCLLFAL FDRGNALYGS SSPVLQLTPS NFKSKVLNSN GVVLVEFFAP WCGHCQSLTP TWEKVASTLK GIATVAAIDA DAHKSVSQDY
101: GVRGFPTIKV FVPGKPPIDY QGARDAKSIS QFAIKQIKAL LKDRLDGKTS GTKNGGGSSE KKKSEPSASV ELNSSNFDEL VTESKELWIV EFFAPWCGHC
201: KKLAPEWKKA ANNLKGKVKL GHVNCDAEQS IKSRFKVQGF PTILVFGSDK SSPVPYEGAR SASAIESFAL EQLESNAGPA EVTELTGPDV MEDKCGSAAI
301: CFVSFLPDIL DSKAEGRNKY LEMLLSVADK FKKDPYGFVW VAAGKQPDLE KRVGVGGYGY PAMVALNAKK GAYAPLKSGF EVKHLKDFVK EAAKGGKGNL
401: PIDGTMEIVK TEAWDGKDGE VVDADEFSLE DLMGNDDEAS TESKDDL

Arabidopsis Description

PDIL2-2Protein disulfide-isomerase like 2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAU6]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.