Factsheet for TraesCS5A01G234400.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	endoplasmic reticulum

golgi: 25769308
nucleus: 26228564

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

msms PMID: 26228564 doi

E Bancel, T Bonnot, M Davanture, G Branlard, M Zivy, P Martre

Blaise Pascal University, UMR1095 Genetics, Diversity and Ecophysiology of Cereals, Avenue des Landais, F-63 170 Aubière, France., CNRS, PAPPSO, UMR 0320/8120 Génétique Quantitative et Évolution - Le Moulon, F-91190 Gif-sur-Yvette, France., INRA, UMR1095 Genetics, Diversity and Ecophysiology of Cereals, 5 chemin de Beaulieu, F-63 039 Clermont-Ferrand, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G232900.1	Wheat	golgi	98.86	98.86
TraesCS5D01G241200.1	Wheat	golgi	98.18	98.18
Os09t0451500-02	Rice	plasma membrane	89.32	89.12
EER96832	Sorghum	endoplasmic reticulum	87.73	87.93
Zm00001d020687_P002	Maize	endoplasmic reticulum	87.95	87.76
Zm00001d005866_P003	Maize	endoplasmic reticulum	86.82	86.62
HORVU5Hr1G067570.1	Barley	plasma membrane	98.41	83.59
VIT_12s0059g01560.t01	Wine grape	endoplasmic reticulum	75.45	76.67
KRH73319	Soybean	endoplasmic reticulum	75.45	75.8
Solyc07g049450.2.1	Tomato	nucleus	74.32	75.69
PGSC0003DMT400001769	Potato	extracellular	74.32	75.69
GSMUA_Achr7P12170_001	Banana	endoplasmic reticulum	73.86	75.41
KRH14820	Soybean	endoplasmic reticulum	74.77	75.11
Bra015375.1-P	Field mustard	endoplasmic reticulum	72.5	73.84
CDY53400	Canola	endoplasmic reticulum	56.14	73.08
CDY18278	Canola	endoplasmic reticulum	72.27	72.94
CDY12149	Canola	endoplasmic reticulum	72.05	71.56
Bra005546.1-P	Field mustard	endoplasmic reticulum	71.82	71.33
CDY52544	Canola	endoplasmic reticulum	71.82	71.17
AT1G04980.1	Thale cress	endoplasmic reticulum	71.36	70.25
CDX79497	Canola	endoplasmic reticulum	70.0	69.53
AT2G32920.1	Thale cress	endoplasmic reticulum	69.32	69.32
TraesCS1A01G097700.1	Wheat	golgi	23.18	27.79
TraesCS4A01G107900.1	Wheat	endoplasmic reticulum	8.86	25.83
TraesCS4A01G214200.2	Wheat	plastid	22.73	19.42
TraesCS2A01G306500.1	Wheat	endoplasmic reticulum	21.36	18.18
TraesCS6A01G000600.1	Wheat	endoplasmic reticulum	21.59	16.41
TraesCS6A01G001100.1	Wheat	endoplasmic reticulum	21.36	16.15
TraesCS6A01G220100.1	Wheat	golgi	13.18	13.98
TraesCS2A01G304300.1	Wheat	endoplasmic reticulum	12.95	13.8
TraesCS7A01G123900.1	Wheat	endoplasmic reticulum	15.45	12.57
TraesCS6A01G003200.1	Wheat	endoplasmic reticulum	7.95	11.9

Protein Annotations

MapMan:18.11.1.2	Gene3D:3.40.30.10	InterPro:Disulphide_isomerase	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005788	GO:GO:0008150
GO:GO:0009987	GO:GO:0016853	GO:GO:0019725	GO:GO:0045454	InterPro:IPR013766	PFAM:PF00085
PRINTS:PR00421	ScanProsite:PS00194	PFscan:PS51352	PANTHER:PTHR18929	PANTHER:PTHR18929:SF38	SUPFAM:SSF52833
SignalP:SignalP-noTM	TIGRFAMs:TIGR01126	TMHMM:TMhelix	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain
EnsemblPlantsGene:TraesCS5A01G234400	EnsemblPlants:TraesCS5A01G234400.1	TIGR:cd02983	TIGR:cd03001	SEG:seg	:

Description

No Description!

Coordinates

chr5A:+:450551631..450556754

Molecular Weight (calculated)

47186.3 Da

IEP (calculated)

4.977

GRAVY (calculated)

-0.145

Length

440 amino acids

Sequence
(BLAST)

001: MRPAILAAIL LLLAAAASPA AALYSAGSPV LQLNPNNFKK VLNANGVVLV EFFAPWCGHC KQLTPIWEKA AGVLKGVATV AALDADAHKE LAQQYGIRGF
101: PTIKVFLPGK PPVDYEGARD VKPIVNFALS QVKGLLRDRL DGKTSGGSSG KTSGGSSEKK NEPNESVELN SSNFDELVVK SKDLWIVEFF APWCGHCKKL
201: APEWKRAAKN LKGQVKLGHV DCDSDKSLMS KYKVEGFPTI LVFGADKESP FPYQGARAAS AIEPFALEQL EANAAPPEVS ELTSADVMEE KCASAAICFV
301: SFLPDILDSK AEGRNKYLEL LLSVAEKFKK SPYSFVWAGA GKQADLEKQV GVGGYGYPAM VALNVKKGAY APLRSAFELA EITEFVKEAG RGGKGNLPLE
401: GAPTVVESEP WDGKDGEVIE EDEFSLEELM ADSSAPNDEL

Best Arabidopsis Sequence Match ( AT1G04980.1 )
(BLAST)

001: MERKMYKSTV FPICCLLFAL FDRGNALYGS SSPVLQLTPS NFKSKVLNSN GVVLVEFFAP WCGHCQSLTP TWEKVASTLK GIATVAAIDA DAHKSVSQDY
101: GVRGFPTIKV FVPGKPPIDY QGARDAKSIS QFAIKQIKAL LKDRLDGKTS GTKNGGGSSE KKKSEPSASV ELNSSNFDEL VTESKELWIV EFFAPWCGHC
201: KKLAPEWKKA ANNLKGKVKL GHVNCDAEQS IKSRFKVQGF PTILVFGSDK SSPVPYEGAR SASAIESFAL EQLESNAGPA EVTELTGPDV MEDKCGSAAI
301: CFVSFLPDIL DSKAEGRNKY LEMLLSVADK FKKDPYGFVW VAAGKQPDLE KRVGVGGYGY PAMVALNAKK GAYAPLKSGF EVKHLKDFVK EAAKGGKGNL
401: PIDGTMEIVK TEAWDGKDGE VVDADEFSLE DLMGNDDEAS TESKDDL

Arabidopsis Description

PDIL2-2Protein disulfide-isomerase like 2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAU6]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.