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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • plastid 3
  • endoplasmic reticulum 6
  • extracellular 3
  • vacuole 3
  • plasma membrane 3
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:plastid, secretory
BaCelLo:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:endoplasmic reticulum
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY52544 Canola endoplasmic reticulum 99.32 99.1
Bra005546.1-P Field mustard endoplasmic reticulum 98.87 98.87
CDX79497 Canola endoplasmic reticulum 92.55 92.55
AT2G32920.1 Thale cress endoplasmic reticulum 90.07 90.68
CDY53400 Canola endoplasmic reticulum 60.27 78.99
CDY18278 Canola endoplasmic reticulum 77.43 78.67
VIT_12s0059g01560.t01 Wine grape endoplasmic reticulum 73.14 74.83
Solyc07g049450.2.1 Tomato nucleus 72.91 74.77
KRH73319 Soybean endoplasmic reticulum 73.81 74.66
KRH14820 Soybean endoplasmic reticulum 73.59 74.43
PGSC0003DMT400001769 Potato extracellular 72.46 74.31
GSMUA_Achr7P12170_001 Banana endoplasmic reticulum 71.56 73.55
Os09t0451500-02 Rice plasma membrane 72.23 72.56
TraesCS5B01G232900.1 Wheat golgi 71.78 72.27
Zm00001d020687_P002 Maize endoplasmic reticulum 71.78 72.11
TraesCS5A01G234400.1 Wheat golgi 71.56 72.05
EER96832 Sorghum endoplasmic reticulum 71.33 71.98
TraesCS5D01G241200.1 Wheat golgi 71.33 71.82
Zm00001d005866_P003 Maize endoplasmic reticulum 71.33 71.66
HORVU5Hr1G067570.1 Barley plasma membrane 71.78 61.39
CDY57723 Canola endoplasmic reticulum 23.02 28.25
CDX80106 Canola endoplasmic reticulum 22.8 27.98
CDX95726 Canola endoplasmic reticulum 22.8 27.9
CDX83326 Canola endoplasmic reticulum 22.35 27.35
CDX95112 Canola endoplasmic reticulum 8.13 25.0
CDX93606 Canola endoplasmic reticulum 7.9 24.31
CDX79207 Canola cytosol 6.32 23.14
CDX95413 Canola cytosol 11.96 22.18
CDY40898 Canola endoplasmic reticulum 22.12 19.22
CDY38344 Canola endoplasmic reticulum 22.12 19.18
CDX96575 Canola endoplasmic reticulum 21.67 19.16
CDY38821 Canola cytosol, endoplasmic reticulum 21.44 19.0
CDY01314 Canola endoplasmic reticulum 21.22 18.95
CDY00400 Canola endoplasmic reticulum 21.22 18.65
CDX87514 Canola endoplasmic reticulum 21.22 18.47
CDY08176 Canola endoplasmic reticulum 20.32 18.07
CDY04673 Canola endoplasmic reticulum 20.32 18.07
CDX88376 Canola cytosol, endoplasmic reticulum 20.77 18.0
CDX73422 Canola endoplasmic reticulum 20.99 16.15
CDY56958 Canola endoplasmic reticulum 20.99 16.06
CDY09193 Canola endoplasmic reticulum 19.19 14.48
CDY31525 Canola endoplasmic reticulum 19.41 14.43
CDY53631 Canola endoplasmic reticulum 19.19 14.26
CDY02550 Canola endoplasmic reticulum 16.48 13.88
CDY47529 Canola endoplasmic reticulum 16.03 13.5
CDY52981 Canola endoplasmic reticulum 15.35 12.85
CDY68572 Canola endoplasmic reticulum 15.12 12.79
CDY37102 Canola endoplasmic reticulum 11.74 11.95
CDX73337 Canola endoplasmic reticulum 11.74 11.95
Protein Annotations
MapMan:18.11.1.2Gene3D:3.40.30.10GO:A0A078FGK7UniProt:A0A078FGK7EnsemblPlants:CDY12149ProteinID:CDY12149
ProteinID:CDY12149.1InterPro:Disulphide_isomeraseGO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005623
GO:GO:0008150GO:GO:0009987GO:GO:0016853GO:GO:0019725GO:GO:0045454EnsemblPlantsGene:GSBRNA2T00061148001
InterPro:IPR013766PFAM:PF00085PRINTS:PR00421ScanProsite:PS00194PFscan:PS51352PANTHER:PTHR18929
PANTHER:PTHR18929:SF38SUPFAM:SSF52833SignalP:SignalP-noTMTIGRFAMs:TIGR01126InterPro:Thioredoxin-like_sfInterPro:Thioredoxin_CS
InterPro:Thioredoxin_domainUniParc:UPI0004EE1FD5SEG:seg:::
Description
BnaC04g11790DBnaC04g11790D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FGK7]
Coordinates
chrLK032018:+:16393..19503
Molecular Weight (calculated)
47973.3 Da
IEP (calculated)
5.771
GRAVY (calculated)
-0.139
Length
443 amino acids
Sequence
(BLAST)
001: MYIKSPPTWL TLLCLSFGFL NLTNALYGSS SPVVQLTASN FKSKVLNSNG VVLVEFFAPW CGHCKALTPT WEKVASVLKG VATVAAIDAD AHQSAAQDYG
101: IQGFPTIKVF VPGKPPVDYQ GARDAKSIAN FAYKQIKALL SDRLEGKSKP SGGGSSEKKS EPSASVELNS SNFDELVIKS NDLWIVEFFA PWCGHCKKLA
201: PEWKRAAKNL KGKVKLGHVN CDVEQSIMSR FKVQGFPTIM VFGVDKSSPY AYDGARSASA IESFATELVE ASAGPVEVTE LTGPDVMEKK CGSAAICFVS
301: FLPDILDSKA EGRNKYLEML LSVAEKFKRH PYSFVWVAAV TQPDLEKRVN VGGYGYPAMV AMNVKKGVYA PLKSAFELQH LLEFVKDAGA GGKGNVPMNG
401: TPEIVETKAW DGKDGEVMEE DEFSLEELMG GDDDANVGTK DEL
Best Arabidopsis Sequence Match ( AT2G32920.1 )
(BLAST)
001: MYKSPLTLLT LLTICFGFFD LSSALYGSSS PVVQLTASNF KSKVLNSNGV VLVEFFAPWC GHCKALTPTW EKVANILKGV ATVAAIDADA HQSAAQDYGI
101: KGFPTIKVFV PGKAPIDYQG ARDAKSIANF AYKQIKGLLS DRLEGKSKPT GGGSKEKKSE PSASVELNAS NFDDLVIESN ELWIVEFFAP WCGHCKKLAP
201: EWKRAAKNLQ GKVKLGHVNC DVEQSIMSRF KVQGFPTILV FGPDKSSPYP YEGARSASAI ESFASELVES SAGPVEVTEL TGPDVMEKKC GSAAICFISF
301: LPDILDSKAE GRNKYLEMLL SVAEKFKKQP YSFMWVAAVT QMDLEKRVNV GGYGYPAMVA MNVKKGVYAP LKSAFELQHL LEFVKDAGTG GKGNVPMNGT
401: PEIVKTKEWD GKDGELIEED EFSLDELMGG DDAVGSKDEL
Arabidopsis Description
PDIL2-3Protein disulfide-isomerase 2-3 [Source:UniProtKB/Swiss-Prot;Acc:O48773]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.